Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30328
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase ... 57 2e-08
U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase ... 57 2e-08
J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein ( C.ele... 57 2e-08
U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase ... 53 3e-07
U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical pr... 31 0.89
AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical ... 30 1.6
Z75526-3|CAA99769.1| 578|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z70203-3|CAA94106.2| 219|Caenorhabditis elegans Hypothetical pr... 29 2.7
U42847-3|AAA83605.2| 210|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical ... 29 4.7
AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical ... 29 4.7
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 29 4.7
AC006792-1|AAF60741.2| 642|Caenorhabditis elegans Hypothetical ... 29 4.7
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 28 6.3
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 6.3
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 28 6.3
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 28 8.3
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 28 8.3
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 28 8.3
>U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase
protein 2, isoform a protein.
Length = 366
Score = 56.8 bits (131), Expect = 2e-08
Identities = 38/139 (27%), Positives = 62/139 (44%)
Frame = +1
Query: 337 DLREILLEFTISYLLEQPGDVINYAVEFFTRLQNNRTTTIVRGPVAGTPDESIISDEEEP 516
++++++ E + + +P + + + + F +L R G PD + D
Sbjct: 21 NIQQLVKEAIVVLCIHKPDNPVLFLKDHFEKLNEQRAQE------GGNPDAADDDDIIVE 74
Query: 517 PVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQM 696
P R RR + AE P ++D E V PK DA R L A+R LLF L+ +
Sbjct: 75 PPKRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLEEDEQ 131
Query: 697 QQVLDAMFEKRSEPGEYVI 753
+ + DAMF GE +I
Sbjct: 132 KTMYDAMFPVEKSAGETII 150
>U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase
protein 2, isoform c protein.
Length = 376
Score = 56.8 bits (131), Expect = 2e-08
Identities = 38/139 (27%), Positives = 62/139 (44%)
Frame = +1
Query: 337 DLREILLEFTISYLLEQPGDVINYAVEFFTRLQNNRTTTIVRGPVAGTPDESIISDEEEP 516
++++++ E + + +P + + + + F +L R G PD + D
Sbjct: 31 NIQQLVKEAIVVLCIHKPDNPVLFLKDHFEKLNEQRAQE------GGNPDAADDDDIIVE 84
Query: 517 PVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQM 696
P R RR + AE P ++D E V PK DA R L A+R LLF L+ +
Sbjct: 85 PPKRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLEEDEQ 141
Query: 697 QQVLDAMFEKRSEPGEYVI 753
+ + DAMF GE +I
Sbjct: 142 KTMYDAMFPVEKSAGETII 160
>J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein (
C.elegans cAMP-dependentprotein kinase subunit R mRNA,
complete cds. ).
Length = 376
Score = 56.8 bits (131), Expect = 2e-08
Identities = 38/139 (27%), Positives = 62/139 (44%)
Frame = +1
Query: 337 DLREILLEFTISYLLEQPGDVINYAVEFFTRLQNNRTTTIVRGPVAGTPDESIISDEEEP 516
++++++ E + + +P + + + + F +L R G PD + D
Sbjct: 31 NIQQLVKEAIVVLCIHKPDNPVLFLKDHFEKLNEQRAQE------GGNPDAADDDDIIVE 84
Query: 517 PVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLDAQQM 696
P R RR + AE P ++D E V PK DA R L A+R LLF L+ +
Sbjct: 85 PPKRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLEEDEQ 141
Query: 697 QQVLDAMFEKRSEPGEYVI 753
+ + DAMF GE +I
Sbjct: 142 KTMYDAMFPVEKSAGETII 160
>U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase
protein 2, isoform b protein.
Length = 334
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/93 (35%), Positives = 43/93 (46%)
Frame = +1
Query: 475 GTPDESIISDEEEPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAV 654
G PD + D P R RR + AE P ++D E V PK DA R L A+
Sbjct: 29 GNPDAADDDDIIVEPPKRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAM 85
Query: 655 RGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVI 753
R LLF L+ + + + DAMF GE +I
Sbjct: 86 RKNLLFAHLEEDEQKTMYDAMFPVEKSAGETII 118
>U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical
protein C09G4.2c protein.
Length = 617
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 607 VFPKSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIR 756
+ KSDA + A+R R+LDA Q++++ AM+ G +IR
Sbjct: 52 IIGKSDAAFETIGNALRLNSFLRNLDATQIEKISSAMYPVEVPAGAIIIR 101
>AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical
protein Y23H5B.2 protein.
Length = 139
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -2
Query: 667 AVCPGPPQRDGLSVRPTWGTRQGLLRQNHPLRGHKSRRKRICAD 536
+ P PP + G+ + ++G R + KS +K++C D
Sbjct: 80 SAAPAPPAKSGVPAKSAEKAKEGSQRSARLKKEQKSEKKKVCVD 123
>Z75526-3|CAA99769.1| 578|Caenorhabditis elegans Hypothetical
protein C06H2.3 protein.
Length = 578
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +1
Query: 556 AETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVR---GILLFRSLDAQQMQQVLDAMFEK 726
+E DP +D D +PA+ PK +A + RL + GIL LD Q + +++ +F +
Sbjct: 157 SEKADPSYEDYDARSPAMLPKIEAFKQRLEDLDTWNFGILQIH-LDDQVVSKLIRNLFSR 215
Query: 727 RS 732
S
Sbjct: 216 FS 217
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 502 DEEEPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAE 648
DEEE PVA +KS AET + E+D+ +E ++RA E
Sbjct: 229 DEEEEPVAT-KKSKKSKRAETPEEEDDEEEEVVKTPKKTKKSKRAETPE 276
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/49 (42%), Positives = 24/49 (48%)
Frame = +1
Query: 472 AGTPDESIISDEEEPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPK 618
A TP+E DEEE V +KS AET PEE+D E PK
Sbjct: 246 AETPEEE--DDEEEEVVKTPKKTKKSKRAET--PEEEDEVEEEVVKTPK 290
>Z70203-3|CAA94106.2| 219|Caenorhabditis elegans Hypothetical
protein C05G5.3 protein.
Length = 219
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 502 DEEEPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLA-EAVRGILLFRS 678
DEEE + +FNN RK + + P+E + + P SDA + + + G L
Sbjct: 103 DEEEEQMPQFNN-RKITNTQNFCPDEPSTSQENPFAKELSDADKMNVTIGKLHGKLATAQ 161
Query: 679 LDAQQMQQVLDAMFEKR 729
L A+ Q + E++
Sbjct: 162 LKAKTRQIAAEMSNEEK 178
>U42847-3|AAA83605.2| 210|Caenorhabditis elegans Hypothetical
protein F39H12.3 protein.
Length = 210
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 310 QGGRIQVPDDLREILLEFTISYLLEQPGDVINYAVEFFTRLQNNR--TTTIVRGPVA 474
Q + VP DLR IL L QP DV + FF +R I++ P A
Sbjct: 3 QRNKCFVPHDLRPILEALAREVLRSQPSDVAEFGHMFFDEYLKHRRENRNILKDPAA 59
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +1
Query: 394 DVINYAVEFFTRLQNNRTTTIVRGPVAGTPDESIISDEEEPPVARFNNRRKSVFAETYDP 573
+++N A E T L+ + + A +E SD++E P ++ +P
Sbjct: 284 NIMNTAKELLTYLKRKKQQ---QKQEAEKQEEEKDSDDDEKPHECDDHHHHD---HEDEP 337
Query: 574 EEDDSDEGAPAVFPKSDAQRARLAEAVRGI 663
EE ++D P KSD ++ + E V G+
Sbjct: 338 EEPENDSNVPEAEEKSDEEQEIMMEDVEGL 367
>AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 493 IISDEEEPPVARFNNRRKSVFAETYDPEEDD 585
++ DE + P RF N+ S+F E+++P+ D
Sbjct: 512 LVYDEFQKPDNRFRNKCLSIFPESFNPKSFD 542
>AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 493 IISDEEEPPVARFNNRRKSVFAETYDPEEDD 585
++ DE + P RF N+ S+F E+++P+ D
Sbjct: 512 LVYDEFQKPDNRFRNKCLSIFPESFNPKSFD 542
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +1
Query: 394 DVINYAVEFFTRLQNNRTTTIVRGPVAGTPDESIISDEEEPPVARFNNRRKSVFAETYDP 573
+++N A E T L+ + + A +E SD++E P ++ +P
Sbjct: 284 NIMNTAKELLTYLKRKKQQ---QKQEAEKQEEEKDSDDDEKPHECDDHHHHD---HEDEP 337
Query: 574 EEDDSDEGAPAVFPKSDAQRARLAEAVRGI 663
EE ++D P KSD ++ + E V G+
Sbjct: 338 EEPENDSNVPEAEEKSDEEQEIMMEDVEGL 367
>AC006792-1|AAF60741.2| 642|Caenorhabditis elegans Hypothetical
protein Y50C1A.1 protein.
Length = 642
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 599 PLPCSPSRTHREPVSLRRSGAYCCSVLLTRSK 694
PL C PS+ HR P+ L A+ ++L R++
Sbjct: 273 PLECPPSQCHRSPLVLCYDSAHFSPLVLMRTE 304
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/74 (25%), Positives = 28/74 (37%)
Frame = -3
Query: 726 LFEHRIQNLLHLLRVKRTEQQYAPDRLSETGSLCVRLGEHGRGSFVRIILFGVISLGENG 547
L E + LL + D + + S+ +RL F R I FG+ L
Sbjct: 1195 LVERAVVGLLRVANRNLFRDNTVSDDVLHSLSMLLRLSPKALFIFSRQIAFGLYELIRAN 1254
Query: 546 FAPIVKARHWRLFF 505
A + K HW + F
Sbjct: 1255 AANVHKKEHWAVLF 1268
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +1
Query: 499 SDEEEPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRS 678
SDEEE N + E+ + E D+D A K D + RGIL R
Sbjct: 203 SDEEEDDGGMVNEIKGDSEEESEEEEGVDTDYTATL---KGDGHLTEDEQKARGILHPRD 259
Query: 679 LDAQQMQQVLDAMFE 723
+DA +Q+ L F+
Sbjct: 260 IDAHWIQRSLAKYFK 274
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/74 (25%), Positives = 28/74 (37%)
Frame = -3
Query: 726 LFEHRIQNLLHLLRVKRTEQQYAPDRLSETGSLCVRLGEHGRGSFVRIILFGVISLGENG 547
L E + LL + D + + S+ +RL F R I FG+ L
Sbjct: 1195 LVERAVVGLLRVANRNLFRDNTVSDDVLHSLSMLLRLSPKALFIFSRQIAFGLYELIRAN 1254
Query: 546 FAPIVKARHWRLFF 505
A + K HW + F
Sbjct: 1255 AANVHKKEHWAVLF 1268
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 502 DEEEPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAV-RGILLF-R 675
DEEE + S E + EDD D+ PA PK+ + + E++ G ++F R
Sbjct: 209 DEEEGEEESEGSEDGSEAFEASEASEDDEDDEEPAKKPKNPKAQLKTDESITEGKVVFLR 268
Query: 676 SLDAQQMQQVLDAMFEK 726
+L ++++ K
Sbjct: 269 NLSYDTKEELIKEELSK 285
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 484 DESIISDEEEPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAE 648
DE I E+E V RR VF Y + + DE + + DA+ + AE
Sbjct: 861 DELIAEREQELKVTAEKLRRSEVFISDYKQQMEKMDEERLVLKTRLDAESSERAE 915
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 484 DESIISDEEEPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAE 648
DE I E+E V RR VF Y + + DE + + DA+ + AE
Sbjct: 861 DELIAEREQELKVTAEKLRRSEVFISDYKQQMEKMDEERLVLKTRLDAESSERAE 915
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 484 DESIISDEEEPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAE 648
DE I E+E V RR VF Y + + DE + + DA+ + AE
Sbjct: 861 DELIAEREQELKVTAEKLRRSEVFISDYKQQMEKMDEERLVLKTRLDAESSERAE 915
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,020,286
Number of Sequences: 27780
Number of extensions: 362549
Number of successful extensions: 1292
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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