Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30325
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 3e-37
SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.) 139 2e-33
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 128 3e-30
SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 8e-30
SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 2e-29
SB_13048| Best HMM Match : Fork_head (HMM E-Value=0) 125 3e-29
SB_34638| Best HMM Match : Fork_head (HMM E-Value=0) 123 1e-28
SB_47058| Best HMM Match : Fork_head (HMM E-Value=0) 123 1e-28
SB_5331| Best HMM Match : Fork_head (HMM E-Value=0) 118 4e-27
SB_53442| Best HMM Match : Fork_head (HMM E-Value=0) 118 5e-27
SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 9e-25
SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 8e-23
SB_10836| Best HMM Match : Fork_head (HMM E-Value=0) 103 1e-22
SB_5069| Best HMM Match : Fork_head (HMM E-Value=0) 103 2e-22
SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 5e-21
SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39) 97 1e-20
SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 1e-18
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 5e-17
SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30) 83 2e-16
SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29) 79 4e-15
SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05) 66 2e-11
SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21) 58 9e-09
SB_38984| Best HMM Match : Fork_head (HMM E-Value=3e-06) 50 2e-06
SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_51004| Best HMM Match : Fork_head (HMM E-Value=3) 46 2e-05
SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_9455| Best HMM Match : Fork_head (HMM E-Value=0.021) 36 0.043
SB_12924| Best HMM Match : Fork_head (HMM E-Value=0.88) 35 0.057
SB_55219| Best HMM Match : Lipoprotein_17 (HMM E-Value=4.5) 34 0.100
SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_19913| Best HMM Match : zf-C2H2 (HMM E-Value=8.9e-08) 29 4.9
SB_24756| Best HMM Match : 7tm_1 (HMM E-Value=2e-08) 28 8.6
>SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 152 bits (368), Expect = 3e-37
Identities = 68/124 (54%), Positives = 86/124 (69%)
Frame = +3
Query: 183 SDSELDVTGTEPVDCSKPKDDDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYI 362
+D + + P DC K + D + + KP YSY ALI MAIR SPEKRLTLNGIY+YI
Sbjct: 15 TDVKKEDGSASPTDCIKAEGKDTSKDPNVKPPYSYVALIAMAIRESPEKRLTLNGIYQYI 74
Query: 363 MTNFPYYRENRQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTG 542
++ FPYY +N++GWQNSIRHNLSLN+CF+KVPR KGNYW LD + +D+F G
Sbjct: 75 ISKFPYYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNYR 134
Query: 543 KLRR 554
+ RR
Sbjct: 135 RRRR 138
>SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 139 bits (336), Expect = 2e-33
Identities = 61/96 (63%), Positives = 77/96 (80%)
Frame = +3
Query: 270 KPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHNLSLNKCFV 449
KP YSY ALI MAI+++PEKR+TL+GIY +IM FPYYR N+QGWQNSIRHNLSLN+CFV
Sbjct: 58 KPPYSYIALIAMAIQSAPEKRITLSGIYSFIMDRFPYYRNNKQGWQNSIRHNLSLNECFV 117
Query: 450 KVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRRR 557
KVPR PGKG++WMLD + ++F G+ + R+R
Sbjct: 118 KVPRDDKKPGKGSFWMLDPDSLNMFENGSYLRRRKR 153
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 128 bits (310), Expect = 3e-30
Identities = 59/118 (50%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Frame = +3
Query: 216 PVDCSKPKDDDNGEK---KHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYR 386
P+D S D+ + K KP YSY LI AI +SPEK++TL+ IY++I +FPYY+
Sbjct: 52 PLDPSAVLDETEARQHQTKESKPPYSYANLITFAINSSPEKKMTLSEIYQWICDHFPYYK 111
Query: 387 ENRQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRRRS 560
E GW+NSIRHNLSLNKCF+KVPR DDPGKG+YW +D + + G + R+ S
Sbjct: 112 EAGNGWKNSIRHNLSLNKCFIKVPRSKDDPGKGSYWAIDQNPQEESPGSRQNRKRKTS 169
>SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 127 bits (307), Expect = 8e-30
Identities = 60/117 (51%), Positives = 78/117 (66%), Gaps = 3/117 (2%)
Frame = +3
Query: 216 PVDCSKPKDDDNGEKK---HEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYR 386
P + K KD + ++ H KP YSY +LI MAI+ SP K LTL+ IY++IM FPYYR
Sbjct: 18 PHELKKSKDKEKAYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQFIMDLFPYYR 77
Query: 387 ENRQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRRR 557
+N+Q WQNSIRH+LS N CFVKVPR D PGKG+YW L ++F G + ++R
Sbjct: 78 QNQQRWQNSIRHSLSFNDCFVKVPRSPDRPGKGSYWTLHPDCGNMFENGCYLRRQKR 134
>SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 126 bits (304), Expect = 2e-29
Identities = 57/97 (58%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Frame = +3
Query: 267 EKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYR-ENRQGWQNSIRHNLSLNKC 443
+KP YSY ALI MAI+ SP +++TLNGIY +I + FPYY +N++GWQNSIRHNLSLN+C
Sbjct: 60 QKPPYSYVALISMAIKQSPGRKITLNGIYHFITSAFPYYTWQNKRGWQNSIRHNLSLNRC 119
Query: 444 FVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRR 554
FVKV R DPGKG YW LD + +++F G + RR
Sbjct: 120 FVKVHREKADPGKGCYWTLDPAYEEMFEDGKYWRRRR 156
>SB_13048| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 311
Score = 125 bits (302), Expect = 3e-29
Identities = 60/112 (53%), Positives = 76/112 (67%), Gaps = 4/112 (3%)
Frame = +3
Query: 234 PKDDDNGEKKH----EKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQG 401
PK+ D K+ KP YSY ALI MAI SP+++LTL+ I E+I FPYYRE
Sbjct: 48 PKEPDLVSKRQGTALSKPPYSYIALITMAILQSPQRKLTLSDICEFIKRRFPYYREKFPS 107
Query: 402 WQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRRR 557
WQNSIRHNLSLN CFVK+PR +PGKGNYW LD +++ +F G+ + R+R
Sbjct: 108 WQNSIRHNLSLNDCFVKMPREPGNPGKGNYWTLDPASEGMFDNGSFLRRRKR 159
>SB_34638| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 123 bits (297), Expect = 1e-28
Identities = 57/90 (63%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Frame = +3
Query: 270 KPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHNLSLNKCFV 449
KP +SY ALI M+I SP + TLN IYE+IMT FPY+R+N+Q WQNSIRHNLSLN CFV
Sbjct: 92 KPPFSYIALITMSIEASPYRMRTLNEIYEFIMTRFPYFRKNQQKWQNSIRHNLSLNDCFV 151
Query: 450 KVPRH-YDDPGKGNYWMLDASADDVFIGGT 536
KVPR + PGKGNYW L S D+F G+
Sbjct: 152 KVPRSIFGKPGKGNYWTLHPSCGDMFGSGS 181
>SB_47058| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 123 bits (297), Expect = 1e-28
Identities = 57/90 (63%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Frame = +3
Query: 270 KPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHNLSLNKCFV 449
KP +SY ALI M+I SP + TLN IYE+IMT FPY+R+N+Q WQNSIRHNLSLN CFV
Sbjct: 92 KPPFSYIALITMSIEASPYRMRTLNEIYEFIMTRFPYFRKNQQKWQNSIRHNLSLNDCFV 151
Query: 450 KVPRH-YDDPGKGNYWMLDASADDVFIGGT 536
KVPR + PGKGNYW L S D+F G+
Sbjct: 152 KVPRSIFGKPGKGNYWTLHPSCGDMFGSGS 181
>SB_5331| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 503
Score = 118 bits (285), Expect = 4e-27
Identities = 53/104 (50%), Positives = 72/104 (69%)
Frame = +3
Query: 246 DNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHN 425
+ G+ + KP YSY LI+ AI ++ +K+LTL+GIY +I N+PYYR +GWQNSIRHN
Sbjct: 108 EGGKSEDGKPPYSYAQLIVQAILSATDKQLTLSGIYAHITKNYPYYRTADKGWQNSIRHN 167
Query: 426 LSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRRR 557
LSLN+ FVKVPR D+PGKG++W +D S + K R+R
Sbjct: 168 LSLNRYFVKVPRAQDEPGKGSFWRIDPSCEQKLAEQAFRKRRQR 211
>SB_53442| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 407
Score = 118 bits (284), Expect = 5e-27
Identities = 58/125 (46%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Frame = +3
Query: 183 SDSELDVTGTEPVD--CSKPKDDDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYE 356
SDSE +G SK + D + KP YSY LI MA+R++ ++TL+ IY+
Sbjct: 67 SDSEQSESGDSKSSESISKEPNIDYKNDPNHKPPYSYATLICMAMRDTKRVKITLSAIYK 126
Query: 357 YIMTNFPYYRENRQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGT 536
+I NF +YR WQNSIRHNLSLNKCFVKVPR D+PGKG +W +D + D+F+ G
Sbjct: 127 WIKENFMFYRVADPTWQNSIRHNLSLNKCFVKVPRKKDEPGKGGFWRIDPAYADMFVDGV 186
Query: 537 TGKLR 551
+ R
Sbjct: 187 FKRRR 191
>SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 116 bits (280), Expect = 1e-26
Identities = 51/107 (47%), Positives = 74/107 (69%)
Frame = +3
Query: 237 KDDDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSI 416
K ++ KP YSY ALI MAI +SP+++LTL+ IY++I FP+Y+ W+NSI
Sbjct: 32 KKQSRRQQSRGKPPYSYIALICMAITSSPQRQLTLSEIYDFISQRFPFYQTCSIKWKNSI 91
Query: 417 RHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRRR 557
RHNL+LN CF+K+PR + PGKGNYW +D ++ D+F G+ + R+R
Sbjct: 92 RHNLTLNDCFIKLPREPNRPGKGNYWTIDPTSVDMFDNGSFLRRRKR 138
>SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 110 bits (265), Expect = 9e-25
Identities = 54/110 (49%), Positives = 72/110 (65%)
Frame = +3
Query: 258 KKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHNLSLN 437
K +P YSY ALI MA++NSPEKRLTL+GI ++I FP+YRE W+ IR+NLSLN
Sbjct: 105 KCRRRPPYSYIALIAMAVQNSPEKRLTLDGICKFIRDRFPFYRETYPSWKICIRNNLSLN 164
Query: 438 KCFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRRRSALTGRARLA 587
CF+K D+P KGNYW LD + ++F G+ LRR++ + R A
Sbjct: 165 DCFIKTGIKSDEPLKGNYWTLDPESYNMFENGSF--LRRKTRFKKQERAA 212
>SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 104 bits (249), Expect = 8e-23
Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 4/111 (3%)
Frame = +3
Query: 264 HEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHNLSLNKC 443
HEKP SY +LI AI +SPE++L L+ IY +I+T +PY+R GW+NSIRHNLSLN+C
Sbjct: 78 HEKPNQSYISLISEAILSSPEQKLILSDIYNFILTRYPYFRTKGTGWRNSIRHNLSLNEC 137
Query: 444 FVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRR----RSALTGRARL 584
FVK R GKG++W +DA+ D F G K R +S ++ R R+
Sbjct: 138 FVKAGR--SPNGKGHFWAIDATYFDDFRRGDFRKRRSYRRYKSKISNRGRV 186
>SB_10836| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 458
Score = 103 bits (248), Expect = 1e-22
Identities = 55/111 (49%), Positives = 73/111 (65%), Gaps = 2/111 (1%)
Frame = +3
Query: 177 DLSDSELDVTGTEPVDCSKPKDDDNGEKKH-EKPAYSYNALIMMAIRNSPEKRLTLNGIY 353
DLSD EL G + S D +G++K KP YS+++LI MAI SP KRL + IY
Sbjct: 93 DLSD-ELIANGLS--NGSACPDGLSGKRKSPSKPPYSFSSLIFMAIEESPNKRLPVKDIY 149
Query: 354 EYIMTNFPYYRENRQGWQNSIRHNLSLNKCFVKVPRHY-DDPGKGNYWMLD 503
+IM +FPY+R+ R GW+NS+RHNLSLNKCF KV + + GKG+ W +D
Sbjct: 150 NWIMDHFPYFRDARLGWKNSVRHNLSLNKCFKKVDKDKGQNVGKGSLWTVD 200
>SB_5069| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 331
Score = 103 bits (246), Expect = 2e-22
Identities = 53/127 (41%), Positives = 72/127 (56%)
Frame = +3
Query: 177 DLSDSELDVTGTEPVDCSKPKDDDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYE 356
D + DV + V K+ + KPA+SY ALI MAI ++ K++ L IY+
Sbjct: 51 DTPEVVTDVDAEKSVSHLVKKETIVDDDADVKPAHSYIALIAMAILSNSSKKMILGDIYQ 110
Query: 357 YIMTNFPYYRENRQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGT 536
YI NFPYYR + W+NSIRHNLSLN+CF+K R + GKGNYW + + + F G
Sbjct: 111 YISDNFPYYRNKDKSWRNSIRHNLSLNECFIKAGR--SENGKGNYWAIHPANLEDFANGD 168
Query: 537 TGKLRRR 557
+ R R
Sbjct: 169 FRRRRAR 175
>SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 98.3 bits (234), Expect = 5e-21
Identities = 47/99 (47%), Positives = 67/99 (67%)
Frame = +3
Query: 261 KHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHNLSLNK 440
+ EKP+ SY LI AI + P+K+L L+ IY YI+T++PY+R GW+NSIRHNLSLN+
Sbjct: 96 EEEKPSQSYIGLIGKAIMSVPQKKLVLSDIYNYILTHYPYFRNKGAGWRNSIRHNLSLNE 155
Query: 441 CFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTGKLRRR 557
CFVKV R GKG++W ++ + F + G+ RR+
Sbjct: 156 CFVKVGR--SSNGKGHFWAINPENYEDF---SKGEYRRK 189
>SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39)
Length = 554
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = +3
Query: 270 KPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHNLSLNKCFV 449
KP +SY ALI AI NSPEKRLTL I EY++ ++ ++R + QGW+NS+RHNLS NKCFV
Sbjct: 133 KPPHSYIALIATAILNSPEKRLTLTEINEYLVKHYVFFRGSYQGWKNSVRHNLSFNKCFV 192
Query: 450 KVPRHYDDP-GKGNYW 494
K+ R P GK NYW
Sbjct: 193 KILRDPARPWGKDNYW 208
>SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 90.2 bits (214), Expect = 1e-18
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Frame = +3
Query: 180 LSDSELDVTGTEPVDCSKPKD---DDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGI 350
+ SE D TE D + +D +D K +K A ++ A+I +I + P KR+TL+ I
Sbjct: 92 VESSEEDSQVTEDDDMKQAEDHKEEDEAAKDDDKNAETFVAVIAQSILSVPTKRMTLSSI 151
Query: 351 YEYIMTNFPYY-RENRQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFI 527
Y +I N+P++ +E GW+NS+RHNLS N CFVK R + GKG+YWM+ F
Sbjct: 152 YSFIAKNYPHFDKEKGPGWRNSVRHNLSSNDCFVKASR--AENGKGHYWMIHPKDLPEF- 208
Query: 528 GGTTGKLRRR 557
+ G RRR
Sbjct: 209 --SKGNFRRR 216
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 85.0 bits (201), Expect = 5e-17
Identities = 42/87 (48%), Positives = 52/87 (59%)
Frame = +3
Query: 234 PKDDDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNS 413
PK K KP+ SY ALI AI S EKRLTL+ IY+ I FP++ R GW+N+
Sbjct: 7 PKSQYRTGKSQRKPSTSYVALISTAILESAEKRLTLSEIYDAIELKFPWFTATRMGWKNT 66
Query: 414 IRHNLSLNKCFVKVPRHYDDPGKGNYW 494
+RHNLSL++CFVK GK YW
Sbjct: 67 VRHNLSLHECFVK--GELSSNGKSCYW 91
>SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30)
Length = 289
Score = 83.0 bits (196), Expect = 2e-16
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +3
Query: 363 MTNFPYYRENRQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDVFIGGTTG 542
M +FP+YR+N Q WQNS+RHNLS N CFVK+PR D PGKG+ W L +F G+
Sbjct: 1 MDHFPFYRDNTQRWQNSLRHNLSFNDCFVKIPRRPDQPGKGSLWALHPDCGTMFENGSFL 60
Query: 543 KLRRR 557
+ R+R
Sbjct: 61 RRRKR 65
>SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29)
Length = 594
Score = 79.0 bits (186), Expect = 4e-15
Identities = 36/83 (43%), Positives = 53/83 (63%)
Frame = +3
Query: 255 EKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHNLSL 434
+K +P ++Y +LI AI +SP+ +LTLN IY + F Y+R N W+N++RHNLSL
Sbjct: 403 QKADVRPPFTYASLIRQAILDSPDTQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSL 462
Query: 435 NKCFVKVPRHYDDPGKGNYWMLD 503
+KCFV+ + KG WM+D
Sbjct: 463 HKCFVR-----KENVKGAVWMVD 480
>SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 72.1 bits (169), Expect = 4e-13
Identities = 38/81 (46%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Frame = +3
Query: 228 SKPKDDDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRE-----N 392
S+PK +K+ YSY LI AI++SPEKRLTL+ IY++++ + PY+R+ +
Sbjct: 53 SEPK---KSSRKNAWGNYSYADLITQAIQSSPEKRLTLSQIYDWMVNSVPYFRDKGDSNS 109
Query: 393 RQGWQNSIRHNLSLNKCFVKV 455
GW+NSIRHNLSL+ FV+V
Sbjct: 110 SAGWKNSIRHNLSLHSKFVRV 130
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 69.3 bits (162), Expect = 3e-12
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Frame = +3
Query: 231 KPKDDDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYR-----ENR 395
+P DD GEKK+ SY+ LI AI S ++LTL IY++ + N PY++ +
Sbjct: 733 QPDDDATGEKKNPWGNASYSDLIARAIDQSKFQKLTLPQIYDWFVINVPYFKAKEHLPST 792
Query: 396 QGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDASADDV 521
+GW+N+IRH LSL + FV++P DPG ++DDV
Sbjct: 793 KGWKNAIRHTLSLRQRFVRLP----DPGNPYRSWWTVASDDV 830
>SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05)
Length = 156
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +3
Query: 231 KPKDDDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIM 365
K K + +K EKPA+SYNALIMMAIR S EKRLTL+GIYEYIM
Sbjct: 48 KEKAGKDEQKNTEKPAFSYNALIMMAIRGSEEKRLTLSGIYEYIM 92
>SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 64.5 bits (150), Expect = 8e-11
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +3
Query: 333 LTLNGIYEYIMTNFPYY-RENRQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWML 500
+TL+ IY +I +P++ +E GW+NS+RHNLS N CFVK R + GKG+YWM+
Sbjct: 1 MTLSCIYSFIAKTYPHFDKEKGPGWRNSVRHNLSSNDCFVKASR--AENGKGHYWMI 55
>SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21)
Length = 491
Score = 57.6 bits (133), Expect = 9e-09
Identities = 30/79 (37%), Positives = 44/79 (55%)
Frame = +3
Query: 264 HEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRENRQGWQNSIRHNLSLNKC 443
+ +P YSY LI++AI ++ EKR+TL IY++I FPYY + ++ W
Sbjct: 58 YTRPPYSYATLILLAINSTEEKRMTLQEIYKWIEERFPYYTKCKKAW------------- 104
Query: 444 FVKVPRHYDDPGKGNYWML 500
K R D PGKG+YW +
Sbjct: 105 --KEKRPADLPGKGSYWSI 121
>SB_38984| Best HMM Match : Fork_head (HMM E-Value=3e-06)
Length = 246
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 15/86 (17%)
Frame = +3
Query: 240 DDDNGEKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRE-----NRQGW 404
DD EKK SY+ LI AI S +++LTL IYE+ + N Y+R+ + +GW
Sbjct: 122 DDQEKEKKKPWGNASYSDLIARAITQSTKQKLTLPQIYEWFVENVSYFRDREHLPSTKGW 181
Query: 405 ----------QNSIRHNLSLNKCFVK 452
QN+IRH LSL + FV+
Sbjct: 182 KLIRIPCAIIQNAIRHTLSLRQRFVR 207
>SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 264 HEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYREN--RQGWQNSIRHNLSLN 437
+ K SY+ L+ AI +SP+KRLTL IY + N + W+N+IRH LS
Sbjct: 445 YSKGTVSYSDLLAEAISSSPDKRLTLQEIYMWFEDNVAGISPSSVTHDWKNTIRHTLSRR 504
Query: 438 KCFVKV 455
K F+++
Sbjct: 505 KRFLRI 510
>SB_51004| Best HMM Match : Fork_head (HMM E-Value=3)
Length = 136
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +3
Query: 258 KKHEKPAYSYNALIMMAIRNSPEKRLTLNGI 350
K +P YSY ALI MA++NSPEKRLTL+GI
Sbjct: 105 KCRRRPPYSYIALIAMAVQNSPEKRLTLDGI 135
>SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +3
Query: 255 EKKHEKPAYSYNALIMMAIRNSPEKRLTLNGIYEYIMTN 371
EK + KP +SY+ LI MA++NS L ++ IY++++ +
Sbjct: 165 EKCYPKPLFSYSCLIAMALKNSDSGTLPVSEIYKFMIAH 203
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 408 NSIRHNLSLNKCFVKVPRHYD-DPGKGNYWMLDASADD 518
NS+RHNLSLNK F K+ R KG W L D
Sbjct: 299 NSVRHNLSLNKAFCKLERPQGASQRKGCLWSLKPERRD 336
>SB_9455| Best HMM Match : Fork_head (HMM E-Value=0.021)
Length = 266
Score = 35.5 bits (78), Expect = 0.043
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = +3
Query: 282 SYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRE-----NRQGWQNSIR 419
SY+ +I AI + P + TL+ IYE+I+ N Y+ + + GW++ ++
Sbjct: 164 SYSEMISKAIMSCPSQEATLHTIYEWIVNNVSYFADKADYPSTHGWKSHLK 214
>SB_12924| Best HMM Match : Fork_head (HMM E-Value=0.88)
Length = 48
Score = 35.1 bits (77), Expect = 0.057
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 282 SYNALIMMAIRNSPEKRLTLNGIYEYIMTN 371
+Y+ L+ AI +SPE+RLTL GIY + N
Sbjct: 4 TYSELLAKAISSSPEQRLTLQGIYRWFEEN 33
>SB_55219| Best HMM Match : Lipoprotein_17 (HMM E-Value=4.5)
Length = 210
Score = 34.3 bits (75), Expect = 0.100
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 282 SYNALIMMAIRNSPEKRLTLNGIYEYIMTNFPYYRE 389
SY+ +I AI + P + TL+ IYE+I+ N Y+ +
Sbjct: 164 SYSEMISKAIMSCPSQEATLHTIYEWIVNNVSYFAD 199
>SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 207 GTEPVDCSKPKDDDNGEKKHEKPAYSYNALIMMAIRNSPEKR 332
G EP SK K+D G KHE P N L + P +
Sbjct: 1047 GNEPYIISKAKEDFKGAGKHEFPCSKGNILYRITQEGCPNNK 1088
>SB_19913| Best HMM Match : zf-C2H2 (HMM E-Value=8.9e-08)
Length = 532
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 249 NGEKKHEKPAYSYNALIMMAIRNSPEK 329
+GEKKHEKPA + A+R P++
Sbjct: 78 HGEKKHEKPAEPAKPEVPYALRRIPDE 104
>SB_24756| Best HMM Match : 7tm_1 (HMM E-Value=2e-08)
Length = 690
Score = 27.9 bits (59), Expect = 8.6
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -1
Query: 84 LLRTSPFCITVALSIVGNALRV 19
+ R +P+C+ + LS++GN+L V
Sbjct: 375 MARIAPYCLIIPLSLIGNSLVV 396
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,500,815
Number of Sequences: 59808
Number of extensions: 284841
Number of successful extensions: 794
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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