Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30323
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 262 1e-70
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 262 1e-70
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 238 2e-63
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 161 5e-40
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 88 6e-18
U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 36 0.026
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 36 0.026
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 36 0.026
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 30 1.3
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 30 1.3
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 29 4.0
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 27 9.2
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 27 9.2
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 262 bits (643), Expect = 1e-70
Identities = 123/206 (59%), Positives = 156/206 (75%)
Frame = +2
Query: 56 TGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKA 235
T +R S WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 236 EEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLE 415
E + + L+ EYA I G +T A+LA GE+S VIKNK T Q++SGTGALR+G E
Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128
Query: 416 FITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPE 595
F++K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPE
Sbjct: 129 FLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPE 187
Query: 596 GSIILLHACAHNPTGVDPKPNDWEQL 673
GS ILLHACAHNPTGVDP + W+++
Sbjct: 188 GSTILLHACAHNPTGVDPSRDQWKKI 213
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 262 bits (643), Expect = 1e-70
Identities = 123/206 (59%), Positives = 156/206 (75%)
Frame = +2
Query: 56 TGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKA 235
T +R S WW++V+MGPPD ILG+TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 236 EEILHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLE 415
E + + L+ EYA I G +T A+LA GE+S VIKNK T Q++SGTGALR+G E
Sbjct: 69 ERQVIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSE 128
Query: 416 FITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPE 595
F++K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPE
Sbjct: 129 FLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPE 187
Query: 596 GSIILLHACAHNPTGVDPKPNDWEQL 673
GS ILLHACAHNPTGVDP + W+++
Sbjct: 188 GSTILLHACAHNPTGVDPSRDQWKKI 213
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 238 bits (583), Expect = 2e-63
Identities = 107/198 (54%), Positives = 147/198 (74%)
Frame = +2
Query: 80 WWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRG 259
W+ NV + P D ILG+TEA+KKDT+P K+NLGVGAYRDD+GKPFVL +VR+AE+ +
Sbjct: 22 WFRNVPLAPADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVLRAVREAEQQIIDAK 81
Query: 260 LNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAK 439
++ EY+ I+G + AKLAFG++S VI++ T Q++SGTGALR+G +F+ K +
Sbjct: 82 MDKEYSTITGVPEFAPLAAKLAFGDNSEVIRDGRVFTTQSISGTGALRIGGQFVEK-FIP 140
Query: 440 AKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHA 619
+K ++ PTPTW NH + L + YRY++ +T GFD++GALEDISK+PEGS+ILLHA
Sbjct: 141 SKTLFYPTPTWANHLPVFRNSGLSIQPYRYYNQETLGFDVEGALEDISKMPEGSVILLHA 200
Query: 620 CAHNPTGVDPKPNDWEQL 673
CAHNPTGVDP W++L
Sbjct: 201 CAHNPTGVDPTKEQWKKL 218
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 161 bits (390), Expect = 5e-40
Identities = 77/199 (38%), Positives = 112/199 (56%), Gaps = 2/199 (1%)
Frame = +2
Query: 77 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 253
++++ + + PP + + Y +T P KVNL +GAYR +EG+P+VLP V + E EI +
Sbjct: 2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIAND 61
Query: 254 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHY 433
LNHEY P+ G + A +L G +SP IK + + VQ LSGTGALR G EF+
Sbjct: 62 TSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLAS-V 120
Query: 434 AKAKEIWLPTPTWGNHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALEDISKIPEGSIIL 610
K +++ PTWGNH + Y ++D ++ L D+ PE S+I+
Sbjct: 121 CNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVII 180
Query: 611 LHACAHNPTGVDPKPNDWE 667
LH CAHNPTG+DP W+
Sbjct: 181 LHGCAHNPTGMDPTQEQWK 199
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 87.8 bits (208), Expect = 6e-18
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Frame = +2
Query: 77 TWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 253
++++ + + P L +E ++K+ P K+NL + AYR ++G+P+VLP VR+ E + H
Sbjct: 4 SFFDGIHVASPIKELHTSELFQKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHE 63
Query: 254 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHY 433
NHEY PI G + + L G DS IK + +VQ +SGTGA+ +G EF+ +
Sbjct: 64 PHHNHEYLPILGHDGFCKSATALLLGNDSLAIKEGRSFSVQCISGTGAICVGAEFLAQ-V 122
Query: 434 AKAKEIWLPTP 466
K I++ P
Sbjct: 123 LSMKTIYVSNP 133
>U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical
protein C14E2.2 protein.
Length = 364
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 476 NHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHACAHNPTGVDPK 652
+H IC +Y +++ + D++ L D+ P S+I+L ACA+NPTG+D
Sbjct: 91 SHHLICKKAGFTTVAEYTFWNYEEKCVDIEKLLSDLEFAPAKSVIILPACAYNPTGMDLS 150
Query: 653 PNDWEQL 673
N W+Q+
Sbjct: 151 ENQWKQI 157
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 35.9 bits (79), Expect = 0.026
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = -3
Query: 396 APVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLTEG 217
+P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T G
Sbjct: 34 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPSTVG 91
Query: 216 KTNGFPSSSLYA 181
T+G SSS YA
Sbjct: 92 STSGAASSSSYA 103
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 35.9 bits (79), Expect = 0.026
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = -3
Query: 396 APVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLTEG 217
+P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T G
Sbjct: 241 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPSTVG 298
Query: 216 KTNGFPSSSLYA 181
T+G SSS YA
Sbjct: 299 STSGAASSSSYA 310
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 35.9 bits (79), Expect = 0.026
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = -3
Query: 396 APVPDSVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYS*LSPLLWRISSAFLTEG 217
+P+P S+ T L + + SSP A+ +T V ++S + + S P ++S+ T G
Sbjct: 241 SPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVASSPSTVG 298
Query: 216 KTNGFPSSSLYA 181
T+G SSS YA
Sbjct: 299 STSGAASSSSYA 310
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -3
Query: 645 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 496
+TP+G CA N ++E S IFD I S P S PL L + YF C L +
Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -3
Query: 645 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 496
+TP+G CA N ++E S IFD I S P S PL L + YF C L +
Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2
Query: 319 FSYSISICGLTTDGSILMIESSTMENFFCLSDRRQNKWFSLIISICSNTKIYFF 158
F+ S +I G T GSI +I MEN ++ W ++ I+ N IY +
Sbjct: 182 FTISRTIVGFFTGGSISIINVFIMENI----PKKHRMWINMAITWSPNMPIYSY 231
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 372 TVQLLLFLMTGLSSPKASLATASVYVASPLMGAY 271
++Q L+FL + L +L++A V V P MG Y
Sbjct: 3 SLQYLIFLFSSLLFAGLALSSAQVAVNGPFMGRY 36
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 122 GITEAYKKDTHPKKVNLGVGAYRDDEG 202
GI A +++ HP KV G+G + D G
Sbjct: 910 GIEVAVRRNVHPPKVLTGIGIHSPDGG 936
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,773,926
Number of Sequences: 27780
Number of extensions: 422477
Number of successful extensions: 1205
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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