Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30321
(761 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 183 3e-47
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 178 8e-46
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 171 1e-43
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 161 1e-40
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 159 5e-40
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 155 6e-39
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 100 5e-22
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 88 1e-18
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 86 5e-18
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 84 2e-17
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 83 4e-17
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 79 5e-16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 79 9e-16
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 79 9e-16
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 78 2e-15
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 77 4e-15
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 72 8e-14
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 64 3e-11
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 52 7e-08
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 34 0.025
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.034
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 28 1.7
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 27 2.2
SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr 2... 27 2.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.2
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 27 2.9
SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces pombe... 26 5.1
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 6.7
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 26 6.7
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 8.9
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S... 25 8.9
SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr... 25 8.9
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 8.9
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 183 bits (445), Expect = 3e-47
Identities = 96/197 (48%), Positives = 125/197 (63%), Gaps = 10/197 (5%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M T R K+ +VGDG GKTCLL V+++ FPE YVPTVF+NYV + VDG VE+ALWD
Sbjct: 1 MATELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWD 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI 446
TAGQEDY+RLRPLSY ++ L+C++V S S +NV KW E+ HF +S+PI+LVA K
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKA 120
Query: 447 DLRSSDKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGSGARGP 596
DLR+ K + VTT+EG+ + +KI A +ECSA + EVFE S R
Sbjct: 121 DLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFE-SATRAA 179
Query: 597 PQETSPQTHLPISLMKK 647
+ P+ P S KK
Sbjct: 180 MLKHKPKVK-PSSGTKK 195
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 178 bits (433), Expect = 8e-46
Identities = 91/202 (45%), Positives = 129/202 (63%), Gaps = 10/202 (4%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M T R K+ +VGDG GKTCLL V+++ FPE YVPTVF+NYV + VDG +E+ALWD
Sbjct: 1 MTTELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWD 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI 446
TAGQEDY+RLRPLSY ++ L+C+SV + S +NV KW E+ HF +++PI+LV K+
Sbjct: 61 TAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKV 120
Query: 447 DLRSSDKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGSGARGP 596
DLR+ K + +T +EG+ + +KI A +ECSA ++EVFE + AR
Sbjct: 121 DLRNDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFE-TAARAS 179
Query: 597 PQETSPQTHLPISLMKKNATRL 662
+ P + +P + KK+ L
Sbjct: 180 MLKFKPAS-VPKTKKKKHCILL 200
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 171 bits (415), Expect = 1e-43
Identities = 85/177 (48%), Positives = 114/177 (64%), Gaps = 12/177 (6%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
+K VVGDG VGKTCLL YT N+FP +YVPTVFDNY + + E + L+DTAGQED
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQED 63
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 464
Y+RLRPLSY QT+ FLVC+SV S +S+ENV KW+PE+ H VP ++V T+IDLR
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDP 123
Query: 465 KA----------VVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGS--GARGPP 599
+T ++G++L +++ A VECSAL + + VF+ + A PP
Sbjct: 124 SVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDPP 180
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 161 bits (390), Expect = 1e-40
Identities = 81/168 (48%), Positives = 107/168 (63%), Gaps = 12/168 (7%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITV--DGEDVEMALWDTAGQE 281
K+ VVGDG GKTCLL V++ FPE YVPTVF+NY+ IT + + +E+ALWDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 461
+Y+RLRPLSY +N L+C+S+ +S NV KWYPE++HF PIVLV K DLR
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 462 DKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
A VT Q+ + + + A + VECSA E ++EVF+
Sbjct: 136 RNATEVLRTQGLTPVTYQQAQSVALSMNAPY-VECSAKENTGVNEVFQ 182
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 159 bits (385), Expect = 5e-40
Identities = 74/161 (45%), Positives = 105/161 (65%), Gaps = 6/161 (3%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 287
KI ++GDG GKT LL V+T+ FP+ Y PT+F+NY+ I VDG +E++LWDTAGQE+Y
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEY 74
Query: 288 ERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSDK 467
++LR LSY+ T+ ++C++V SR S ENV+ KW PE+ V +VLVA K DLR +D+
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADE 134
Query: 468 ------AVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
++ +EG KKI A +ECSA ++E F
Sbjct: 135 EQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAF 175
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 155 bits (376), Expect = 6e-39
Identities = 79/170 (46%), Positives = 107/170 (62%), Gaps = 10/170 (5%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQE 281
R K+ VVGDG GKT LL V+T FP EYVPTVF+NYV VDG+ V++ALWDTAGQE
Sbjct: 8 RRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQE 67
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 461
+YERLRP+SY + + LV +++ S S ENV KW E+ +VP +LV K DLRS
Sbjct: 68 EYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSD 127
Query: 462 DKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGS 581
A+ V +Q+ + + ++I A +ECS+L +D+VFE +
Sbjct: 128 PVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAA 177
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 99.5 bits (237), Expect = 5e-22
Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ K+ VVGDG VGK+ L ++ F +EY PT+ D+Y +DGE + + DTAGQ
Sbjct: 7 REYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQ 66
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF--SASVPIVLVATKIDL 452
E+Y +R FL+ Y++ SRSS++ + +Y ++ + P+VLVA K DL
Sbjct: 67 EEYSAMREQYMRTGEGFLLVYNITSRSSFDE-ISTFYQQILRVKDKDTFPVVLVANKCDL 125
Query: 453 RSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
+ + VV+ EG++L K + + VE SA R+N++E F
Sbjct: 126 EA--ERVVSRAEGEQLAKSMHCLY-VETSAKLRLNVEEAF 162
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 88.2 bits (209), Expect = 1e-18
Identities = 47/158 (29%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQE 281
+K+ ++GD VGK+CLL ++ + F ++ T+ D + I +DG+ +++ +WDTAGQE
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSASVPIVLVATKIDLRS 458
+ + Y L+ Y V + S++N V W+ + +H S +V +L+ K D
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDN-VRTWFSNVEQHASENVYKILIGNKCD--C 126
Query: 459 SDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
D+ V+ ++G+ L ++ +E SA +N+DE F
Sbjct: 127 EDQRQVSFEQGQALADEL-GVKFLEASAKTNVNVDEAF 163
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 86.2 bits (204), Expect = 5e-18
Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Frame = +3
Query: 87 MGTTKR--LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMA 257
M KR LK+ ++GD VGKTCL+ + +F EY T+ +++ + VD + V +
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 258 LWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSA----SVPI 425
LWDTAGQE ++ L Y +C ++ Y+V + S+++ V W E + ++ + P
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDS-VENWRQEFLYQTSQDECAFPF 119
Query: 426 VLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLV--ECSALERINMDEVFE 575
++V +ID +S +AV + K K ++++ E SA E N+ ++FE
Sbjct: 120 IIVGNQIDKDASKRAVSLHRALDYCKSK-HGSNMIHFEASAKENTNVTDLFE 170
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 84.2 bits (199), Expect = 2e-17
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVG-HITVDGEDVEMALWDTAGQED 284
K ++GD VGK+ LL +TRNEF E T+ + +I +D + ++ +WDTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDLRSS 461
Y + Y L+ Y + +SS++N V +W EL+ H +++ I+LV K DL
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDN-VGRWLKELREHADSNIVIMLVGNKTDL--L 128
Query: 462 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
V+T+E + + + +E SA++ N++E F+
Sbjct: 129 HLRAVSTEEAQAFAAENNLS-FIETSAMDASNVEEAFQ 165
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 83.0 bits (196), Expect = 4e-17
Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M K +I V+G VGK+ L Y N F E Y PT+ + + +I G++ + D
Sbjct: 1 MAPIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIID 60
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATK 443
TAGQ++Y L + +++ YS+ S+SS+E V L H VPIV+V K
Sbjct: 61 TAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNK 120
Query: 444 IDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
DL + VT +EGK L + + A E SA N+ FE
Sbjct: 121 SDLHM--QRAVTAEEGKALANEWKCA-WTEASARHNENVARAFE 161
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 79.4 bits (187), Expect = 5e-16
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ +VGDG GKT + + EF ++Y+ T+ + + H + ++ +WDTAGQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 464
LR Y Q C ++ + V SR +Y+NV H W+ +L ++PIVL K+D++
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNVPH-WWRDLVRVCENIPIVLCGNKVDVKERK 129
Query: 465 -KAVVTTQEGKK 497
KA T KK
Sbjct: 130 VKAKAITFHRKK 141
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 78.6 bits (185), Expect = 9e-16
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQE 281
+K+ ++GD +GKT L+ Y + F EE T+ N++ I++ ++ ++WD GQ
Sbjct: 11 IKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQR 70
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKID---- 449
++ + P+ L + + SR S N + +WY + + F+ + +L+ TK D
Sbjct: 71 EFVNMLPMVCNDAVAILFMFDL-SRKSTLNSIKEWYRQARGFNKTAVPILIGTKYDHFMT 129
Query: 450 LRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
D+ +T Q ++ K ++A+ LV CS IN+ ++F+
Sbjct: 130 FPREDQEEITKQ-ARRYAKAMKAS-LVFCSTSHSINVQKIFK 169
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 78.6 bits (185), Expect = 9e-16
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ ++GD VGK+CLL + + + E Y+ T+ D + ++G+ V++ +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSA-SVPIVLVATKIDLRSS 461
+ + Y + ++ Y V + S+ N V +W E+ ++ V +LV K D+
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNN-VKQWLQEIDRYAVEGVNRLLVGNKSDM--V 126
Query: 462 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
DK VV K+ + L E SA + N+++ F
Sbjct: 127 DKKVVEYSVAKEFADSLNIPFL-ETSAKDSTNVEQAF 162
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 77.8 bits (183), Expect = 2e-15
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAG 275
++ K+ +G+ VGKT L+ + ++F Y T+ +++ + ++ V + LWDTAG
Sbjct: 10 RKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 69
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDL 452
QE + L P ++ ++ Y + + +S+ N KW +++ V IVLV K DL
Sbjct: 70 QERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRAERGDDVIIVLVGNKTDL 128
Query: 453 RSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
+DK VT +EG+K K+++ H+ E SA N+ +F
Sbjct: 129 --ADKRQVTQEEGEKKAKELKIMHM-ETSAKAGHNVKLLF 165
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 76.6 bits (180), Expect = 4e-15
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVG-HITVDGEDVEMALWDTAGQE 281
LK+ ++G+ VGKT ++ Y +F ++Y T+ +++ + VD + V + LWDTAGQE
Sbjct: 9 LKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQE 68
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPE-LKHFSAS----VPIVLVATKI 446
++ L Y +C ++ Y V + S+E + W E L S S P +L+ K+
Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNNSKSFE-TLDSWRDEFLIQASPSNPETFPFILLGNKV 127
Query: 447 DLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
D+ K +V+ + + E SA E IN+ E FE
Sbjct: 128 DV-EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFE 169
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 72.1 bits (169), Expect = 8e-14
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 5/185 (2%)
Frame = +3
Query: 66 SDVAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVD-G 239
S+ A + + T + K+ ++GD VGK+ L+ + +++F + T+ ++ + +D
Sbjct: 3 SNTAPKNVVTINQ-KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDEN 61
Query: 240 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSAS 416
V++ +WDTAGQE Y+ L P+ Y NC +V Y + +S E W EL +
Sbjct: 62 TSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEK-AKSWIKELQRQAPEG 120
Query: 417 VPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLV--ECSALERINMDEVFEGSGAR 590
+ I L K+DL +AV E + A+L+ E SA N++E+F +
Sbjct: 121 IVIALAGNKLDLAQERRAV----EKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKK 176
Query: 591 GPPQE 605
P ++
Sbjct: 177 LPLED 181
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 63.7 bits (148), Expect = 3e-11
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 8/164 (4%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDG-----EDVEMALWDT 269
+KI + G GK+CLL + +N++ ++ TV ++ I G + +++ +WDT
Sbjct: 10 VKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69
Query: 270 AGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATKI 446
AGQE + + Y ++ Y V ++ S+E + W +++ + S + +VL +K
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEE-LSSWLSDIRAMAPSTICVVLAGSKS 128
Query: 447 DLRSSDKAVVTTQEGKKL--KKKIRAAHLVECSALERINMDEVF 572
DL++ + V+T+E + +K I +AH E S+ N++E F
Sbjct: 129 DLQNQRQ--VSTEEAAEFCSEKHISSAH--ETSSYTGSNVEECF 168
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 52.4 bits (120), Expect = 7e-08
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 3/161 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDG-EDVEMALWDTAG 275
K +++ + GD VGK+ L+ + + +P VF D +DV + L DT
Sbjct: 2 KEVRVVICGDQGVGKSSLISALIQEDNVTS-IPKVFPIISIPSNPDSNDDVSLVLVDT-- 58
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI-DL 452
Q D L+ ++C SYE V W P + +VPIVL K DL
Sbjct: 59 QSDSNEREYLAAEIKKANVICLVYSDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDL 118
Query: 453 RSSDKAVVTTQEGKKLKKKIRAAH-LVECSALERINMDEVF 572
+ E L + + + CSALE+IN++E+F
Sbjct: 119 DNYQGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELF 159
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 33.9 bits (74), Expect = 0.025
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ ++I +VG GKT +LY E +PT+ N TV+ ++ +WD GQ
Sbjct: 16 REMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYRNISFTVWDVGGQ 71
Query: 279 EDYERLRPL 305
+++RPL
Sbjct: 72 ---DKIRPL 77
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.5 bits (73), Expect = 0.034
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +3
Query: 93 TTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTA 272
+ K ++I ++G GKT +LY N+ +PTV N TV ++++ +WD
Sbjct: 18 SNKEMRILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVE---TVTYKNIKFNVWDVG 73
Query: 273 GQEDYERLRPL 305
GQ +++RPL
Sbjct: 74 GQ---DKIRPL 81
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +3
Query: 3 IIFKCLYNRVLKR-----EFCGDIGLSDVAARTMGTTKRLKITVVGDGMVGKTCLLY 158
I+ K Y +L+R +FC D+GL MG ++ G+TC+++
Sbjct: 46 IVAKYTYTELLRRVNTIAKFCDDLGLGKTVGIHMGHELDFLCSIFALWATGRTCVIF 102
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 145 VLPTIPSPTTVIFNLFVVPMVRAATSDKPISPQNS 41
V P +P ++ L VV M + +T+D I P+N+
Sbjct: 113 VSPAVPITFAYLYALAVVSMFKCSTADPGILPRNA 147
>SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 338
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 169 LVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATSDKPISP 50
L + ++ VLPT T V++NL + ++ A PI+P
Sbjct: 206 LATSKARSVLPTSYGRTDVVYNLQRLALLTTALGQTPINP 245
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 2.2
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -2
Query: 280 SCPAVSHNAISTSSPSTVMWPT*-LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFN 104
S P S +++ SS S + + LS+++ T +S + TYS V+P+ + + +
Sbjct: 626 SSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSS--LSTYSSSVIPSSSTLVSSSSS 683
Query: 103 LFVVPMVRAATSDKPISPQNSRFKT 29
L V A++S PI +S T
Sbjct: 684 LIVSSSPVASSSSSPIPSSSSLVST 708
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 27.1 bits (57), Expect = 2.9
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +3
Query: 396 LKHFSAS--VPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEV 569
LKH S + +PIV+V + L+S + + + + A + EC+ L +
Sbjct: 250 LKHNSVADDIPIVVVLKAMGLQSDQEIFELVAGAEASYQDLFAPSIEECAKLNIYTAQQA 309
Query: 570 FEGSGARGPPQETSPQTHLP 629
E GAR + LP
Sbjct: 310 LEYIGARVKVNRRAGANRLP 329
>SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 660 LNILLVCYIKMKKFYSKN 713
LN+L +CY+K K + KN
Sbjct: 87 LNVLAICYLKYKDAFFKN 104
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 6.7
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -2
Query: 268 VSHNAISTSSPSTVMWP-T*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVV 92
VS +ST P + ++P T ++ T G ++F T S Q P+ T V + +
Sbjct: 1411 VSSTVVSTVVPGSTVYPVTHVTTTTGVSGESSAFTYTTSSTQYEPS----TVVTTSYYTT 1466
Query: 91 PMVRAATSDKPIS 53
+ +A + + +S
Sbjct: 1467 SVYTSAPATETVS 1479
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 504 KKIRAAHLVECSALERINMDEVFEGSGARGPPQETSPQTHLPISLMKKNATR 659
K++ A + V R++++ +FE S + PP + SP T P N++R
Sbjct: 69 KQVNAKNPVARDIFARLDLENMFEESSKQSPPSK-SP-TKNPSKKSSNNSSR 118
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 512 PSSPFG*MFSTRADKHGRSIRGKRCARPSARNQSTNAPANI 634
PSS + S +DKH + +GK A + STN N+
Sbjct: 1069 PSSVEAIVSSKDSDKHAKESKGKSLAPLISSRVSTNDTTNV 1109
>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 673
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 322 FVCVYDSGLNRS*SSCPAVSHNAISTSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYS 152
F YD L + C ++HN +S SPS V++ +T+ Y +S + T+S
Sbjct: 281 FAFRYDKSLGKF---CSFLNHNLLSLCSPSGVLFGHNDIDTIYVYILTHSGTLETFS 334
>SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 652
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 513 RAAHLVECSALERINMDEVFEGSGARGPPQETSPQTHLPISLMKKNATRLN 665
RA HLVE R+ D+ G + P+E+ + + + ATRL+
Sbjct: 104 RADHLVEEVLEARLKGDKEARGQNSNDQPEESDDKKKRKKKVKEIRATRLD 154
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 118 TVIFNLFVVPMVRAATSDKPISPQNSRFKTLLYKH 14
T I N+F+ P+V+A T + ++ + +L KH
Sbjct: 1340 TSIVNVFITPLVKARTFPESLTTYHLDLLLVLSKH 1374
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,168,380
Number of Sequences: 5004
Number of extensions: 68186
Number of successful extensions: 230
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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