Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30321
(761 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 5e-46
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 159 2e-39
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 2e-31
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 129 2e-30
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 114 8e-26
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 95 7e-20
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 94 1e-19
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 5e-19
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 83 2e-16
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 82 4e-16
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 7e-15
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 9e-15
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 77 2e-14
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 77 2e-14
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 74 1e-13
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 73 2e-13
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 72 6e-13
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 71 1e-12
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 71 1e-12
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 70 2e-12
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 70 2e-12
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 68 1e-11
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 67 1e-11
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 66 2e-11
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 60 1e-09
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 58 6e-09
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 57 2e-08
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 56 2e-08
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 56 3e-08
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 54 2e-07
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 52 4e-07
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 51 9e-07
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 49 5e-06
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 48 8e-06
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 48 8e-06
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 47 1e-05
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 47 2e-05
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 46 3e-05
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 46 3e-05
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 46 4e-05
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 44 1e-04
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 44 1e-04
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 44 1e-04
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 42 5e-04
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 40 0.002
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 40 0.002
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 40 0.002
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 39 0.004
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 39 0.005
SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 38 0.007
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 38 0.012
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 38 0.012
SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34) 37 0.021
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 36 0.027
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06) 36 0.047
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 36 0.047
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 35 0.083
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 34 0.11
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 33 0.25
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 33 0.33
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 33 0.33
SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059) 32 0.44
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 32 0.58
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 32 0.58
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_48977| Best HMM Match : TPR_1 (HMM E-Value=0) 31 1.4
SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46) 30 1.8
SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5) 30 2.4
SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 30 2.4
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 29 3.1
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 29 4.1
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 29 5.5
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 29 5.5
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37) 28 7.2
SB_19176| Best HMM Match : YGGT (HMM E-Value=1.1) 28 9.5
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 181 bits (441), Expect = 5e-46
Identities = 89/178 (50%), Positives = 119/178 (66%), Gaps = 10/178 (5%)
Frame = +3
Query: 72 VAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVE 251
+AA M ++ K+ +VGDG GKTCLL V+++++FPE YVPTVF+NYV I VDG+ VE
Sbjct: 5920 LAALAMAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE 5978
Query: 252 MALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVL 431
+ALWDTAGQEDY+RLRPLSY T+ L+C+S+ S S EN+ KW PE+KHF +VPI+L
Sbjct: 5979 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIIL 6038
Query: 432 VATKIDLRSSD----------KAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
V K DLR + + V +EG+ + KI A +ECSA + + EVFE
Sbjct: 6039 VGNKKDLRMDENTKRELQKMKQEPVKIEEGRAMADKISAYAYLECSAKTKDGVREVFE 6096
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 175 bits (427), Expect = 2e-44
Identities = 87/178 (48%), Positives = 113/178 (63%), Gaps = 12/178 (6%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
+K VVGDG VGKTCLL YT N+FP EYVPTVFDNY + + GE + L+DTAGQED
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 464
Y+RLRPLSY QT+ FLVC+SV S SS+ENV KW PE+ H P +LV T++DLR
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQVDLRDDQ 123
Query: 465 KAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGS--GARGPPQ 602
+ + + +KL +++RA VECSAL + + VF+ + A PP+
Sbjct: 124 GTIEKLSKNKQKPIAVEAAEKLARELRAVKYVECSALTQKGLKNVFDEAILAALEPPE 181
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 159 bits (387), Expect = 2e-39
Identities = 79/171 (46%), Positives = 108/171 (63%), Gaps = 10/171 (5%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ +K+ VVGDG VGK+ L T N FP EY+PTVFDNY +I +DG+ + LWDTAGQ
Sbjct: 4 QNVKLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQ 63
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRS 458
EDY+RLRPLSY T+ FLVC+ +GSR+S+EN+ KW PEL H P +LV K DLRS
Sbjct: 64 EDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKILVGNKRDLRS 123
Query: 459 SDKAV----------VTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGS 581
+ + +T +EGK L K++ +L E S+L + + +V +
Sbjct: 124 AQQNTSLSNHRSRDPITYEEGKALAKRLGMQYL-ENSSLTQDGVKDVMSAA 173
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 133 bits (321), Expect = 2e-31
Identities = 73/167 (43%), Positives = 97/167 (58%), Gaps = 8/167 (4%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFD-NYVGHITVDGEDVEMALWDTAGQE 281
LK+ +VGDG VGKT L N FP EY+PT +D + VDG + L+D+AG E
Sbjct: 7 LKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGE 66
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLR-- 455
D++RLRPL Y T+ FLVC+ + R+S+ENV +W PEL HFS VP VLV K DLR
Sbjct: 67 DFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHFSPGVPRVLVGNKKDLRPK 126
Query: 456 -----SSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGS 581
S V+ +EGK+ + + + +E SAL N+ EV S
Sbjct: 127 QDQEDSHSIDFVSYEEGKEAAQNFKMQY-IENSALLNENVKEVITTS 172
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 129 bits (312), Expect = 2e-30
Identities = 70/180 (38%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
++LK +VGDG VGKT LL Y + FP YVPT FD Y + V+ + + DTAGQ
Sbjct: 17 EQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQ 76
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLR- 455
ED++ LRPL Y+ + F+VC+SV S +S+ NV KW PE++ F PI+LV T DL+
Sbjct: 77 EDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTHSDLKD 136
Query: 456 ---------SSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGSGARG--PPQ 602
D ++ ++ + L KK R VE S++ + N+ VF+ + G PP+
Sbjct: 137 CYKILTELSQQDSQPISVKKAEGLVKKTRCVCYVETSSVTQKNLKTVFDEAIISGYLPPK 196
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 114 bits (274), Expect = 8e-26
Identities = 49/119 (41%), Positives = 75/119 (63%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQE 281
R+ + +VGD GKT LL Y RN+F E+Y TVF++ + VDGE +E+ LWDT+G E
Sbjct: 232 RIPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWDTSGHE 291
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRS 458
DY+ +RPLSY + L+C+ + + ++++ KW E+ + P++LV K DLRS
Sbjct: 292 DYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVLLVGCKQDLRS 350
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 94.7 bits (225), Expect = 7e-20
Identities = 49/139 (35%), Positives = 75/139 (53%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M + ++LK+ + GD VGKT L T+NE E PT F NY + V + + LWD
Sbjct: 1 MASERKLKVVLTGDNNVGKTSFLINLTQNEL--EGTPTAFANYELGLEVGSQKFLLDLWD 58
Query: 267 TAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKI 446
T G +Y+RLRPL+Y ++ L+C+ + +R ++E + KW PE VL+ K
Sbjct: 59 TEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRVLIGNKN 118
Query: 447 DLRSSDKAVVTTQEGKKLK 503
D+R + + + GK LK
Sbjct: 119 DIRKTRQD--KDRRGKVLK 135
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/139 (33%), Positives = 82/139 (58%), Gaps = 13/139 (9%)
Frame = +3
Query: 96 TKRLKITVVGDGMVGKTCLLYV-YTRNEFPEEY-------VPTVFDNYVGHITVDGEDVE 251
T+RLK+ VVGD VGKTC+LY + ++ P++ +P V +++ + + D +
Sbjct: 6 TRRLKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYI 65
Query: 252 MALWDTAG-----QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS 416
+ WDT + D +LRPL Y T+ F++C+ + + +S++NV W PELKH+
Sbjct: 66 VTYWDTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELKHYMPE 125
Query: 417 VPIVLVATKIDLRSSDKAV 473
P+++V K D+R++ +A+
Sbjct: 126 TPVLVVGNKKDMRTNTRAL 144
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 91.9 bits (218), Expect = 5e-19
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLY--VYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTA 272
+ ++I ++GD VGKTCLL Y N +++ ++ +NYV +I VDG+ ++ L D
Sbjct: 17 RNIRIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANIIVDGKVYKLELCDVD 76
Query: 273 GQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDL 452
D + +P S T+ F +C+SVG S+ +V +KWY E+K+ S + PI++V TK DL
Sbjct: 77 NL-DTKISKPFS--DTDVFCLCFSVGDMDSFRHVENKWYAEVKNCSPNSPIIVVGTKTDL 133
Query: 453 RSSD 464
R ++
Sbjct: 134 RENE 137
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 86.2 bits (204), Expect = 3e-17
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
+K+ VGD VGKT LY T + FP ++ ++FD Y + +DG+ + L DT G
Sbjct: 10 IKVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDTPGTM- 68
Query: 285 YERLRPLSYTQ-TNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 461
+ R+ P + Q + FL+C+ + +R S+ N+ W P + ++ VP VLV K++LR S
Sbjct: 69 HPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLETSDVPKVLVGNKMELRCS 128
Query: 462 DK 467
+
Sbjct: 129 QQ 130
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 83.8 bits (198), Expect = 1e-16
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
KI +VGD VGKTCL+ +T+ FP PT+ D + + VDGE V++ +WDTAGQE
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF-SASVPIVLVATKIDLRSS 461
+ + Y + +V Y + ++ S+E+ + +W + + S V I +V K DL ++
Sbjct: 69 FRSITQSYYHNADGVIVTYDITNKKSFES-LPQWLDDTNRYTSKDVLIAIVGNKSDLSTN 127
Query: 462 DKAVVTTQEGKKLKKKIRAAH 524
K V K L KK H
Sbjct: 128 RK--VDFHHAKLLLKKKTLLH 146
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 83.4 bits (197), Expect = 2e-16
Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 3/203 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
K+ K+ VVG G VGK+ L + ++ F +Y PT+ D+Y +D + + DTAGQ
Sbjct: 10 KQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQ 69
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFS--ASVPIVLVATKIDL 452
E++ +R FL+ +SV RSS+E ++K+Y ++ P+++ K DL
Sbjct: 70 EEFSAMREQYMRSGEGFLLVFSVTDRSSFEE-INKFYNQILRVKDRTEFPMIICGNKSDL 128
Query: 453 RSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGSG-ARGPPQETSPQTHLP 629
+ V+T EG++L +++R + + E G G A Q+ + +T P
Sbjct: 129 EY--ERTVSTAEGQELARQLREIIKLVPDRSPSLQAQEALLGLGLALASTQQNACRT-FP 185
Query: 630 ISLMKKNATRLNILLVCYIKMKK 698
+ K + R ++L+ + + +K
Sbjct: 186 FFMSKISNYRTMVILLSFEEYRK 208
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 82.2 bits (194), Expect = 4e-16
Identities = 56/161 (34%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGE-DVEMALWDTAG 275
+ +I ++GD VGK+ LL +T +F E PTV D +V + + G+ +++ +WDTAG
Sbjct: 13 QFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAG 72
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF--SASVPIVLVATKID 449
QE + + Y T L+ Y + +R S+ NV+ WY E K A V +LV KID
Sbjct: 73 QERFRSITYSYYRNTVGCLIIYDITNRDSFVNVM-DWYKEAKQCVEEAEVVFMLVGHKID 131
Query: 450 LRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
S K VV+T+EG+ + +E SA N++E F
Sbjct: 132 KES--KRVVSTEEGECF-AEAHNMMFIETSAKVLCNIEEAF 169
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 78.2 bits (184), Expect = 7e-15
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAG 275
K KI ++GD VGKTCL Y +FPE T+ D + + ++GE V++ LWDTAG
Sbjct: 45 KTFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAG 104
Query: 276 QEDYERLRPLS-YTQTNCFLVCYSVGSRSSYENVVHKWYPELKH--FSASVPIVLVATKI 446
QE + + Y N + Y + + S+E + W E +H +S VP +L+ K
Sbjct: 105 QERFRKSMVCHYYRNVNAVVFMYDITRKCSFE-ALTTWIVEYRHHAYSGDVPKILIGNKC 163
Query: 447 DL 452
DL
Sbjct: 164 DL 165
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 77.8 bits (183), Expect = 9e-15
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQE 281
LKI +VG+ VGK+ LL +T + F + T+ D V +TV+G ++A+WDTAGQE
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIV--LVATKIDLR 455
+ L P Y ++ Y SR +++ + +W E++ +S IV LV KID
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDTNSRETFDK-LEEWLNEVEMYSTKKDIVKMLVGNKIDKH 127
Query: 456 SSDK 467
SS K
Sbjct: 128 SSSK 131
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 77.0 bits (181), Expect = 2e-14
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAG 275
+ KI + GD VGK+ + RN F T+ D + + VDG+ + LWDTAG
Sbjct: 441 RMFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAG 500
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKH-FSASVPIVLVATKIDL 452
QE + + + + + L+ Y V +S+ + V W ++ S VPI+L KID+
Sbjct: 501 QERFRSIAKSYFRKADGVLLLYDVTCETSFLD-VRDWVEAIEESCSKPVPIMLCGNKIDI 559
Query: 453 RSS----DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDE 566
R S +K V+T + G +L K+ A +E S+ E N+ E
Sbjct: 560 RQSAAAENKTVITAESGSRLAKE-HGALFIETSSKENKNIAE 600
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 77.0 bits (181), Expect = 2e-14
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ ++GD VGK+ LL + + F Y+ T+ D + +TVDG+ +++ +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSA-SVPIVLVATKIDLRSS 461
+ L Y + ++ Y V ++ + + +W E+ ++ V +LV K DL
Sbjct: 70 FRTLTTAYYRSAHGIVLIYDVNESETFLH-LSQWLEEVSEYACEGVNTILVGNKCDL--I 126
Query: 462 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGSGARGPPQETSPQT 620
D V K+ +K+ + +E SA + N++ VF A + SP T
Sbjct: 127 DCRQVGYNTAKEFAEKLDIS-FIETSAKDSTNVESVFRTMAAELKAKLGSPLT 178
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 76.6 bits (180), Expect = 2e-14
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 21/163 (12%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLY-------VYTRNEFPEE----YVPTVF--DNYV--------G 221
+K VVG+ VGKT L+ + T+ P + PTVF D Y
Sbjct: 15 IKCVVVGNSGVGKTRLICAEALGVGMKTQEANPRHVRHVHYPTVFAIDQYHVSAEIRDRA 74
Query: 222 HITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
+ T+DG V + LWDT G D+ R +Y + ++C+++ + SS+++V WYPE+K
Sbjct: 75 NFTIDGVSVSLRLWDTFG--DHSMNRRFAYQNAHVIVLCFAINTPSSFKDVNAVWYPEIK 132
Query: 402 HFSASVPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLV 530
+ VPI+LV TK D RS V Q L K++R LV
Sbjct: 133 KYCPRVPIILVGTKSDWRSQLNVSVVCQ-NTSLSKRMRECFLV 174
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 74.1 bits (174), Expect = 1e-13
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 2/172 (1%)
Frame = +3
Query: 84 TMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMAL 260
TMG + K+ ++G+ VGK+ L+ + + +F E T+ ++ + +D V+ +
Sbjct: 15 TMGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEI 74
Query: 261 WDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSASVPIVLVA 437
WDTAGQE Y L P+ Y +V Y + ++ ++ W EL + S ++ I L
Sbjct: 75 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFAR-AKTWVKELQRQASPNIVIALSG 133
Query: 438 TKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGSGARG 593
K DL S K +V ++ + + +E SA +N++++F G +G
Sbjct: 134 NKADLAS--KRMVEYEDAQSYAED-NGLLFMETSAKTAMNVNDIFLAIGKKG 182
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 73.3 bits (172), Expect = 2e-13
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = +3
Query: 120 VGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGED-VEMALWDTAGQEDYERL 296
VGDG GKT + + EF ++Y+ T+ I ++ +WDTAGQE + L
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 297 RPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD-KAV 473
R Y Q C ++ + V SR +Y+NV + W+ +L+ ++PIVL K+D++ KA
Sbjct: 98 RDGYYIQGQCAIIMFDVTSRVTYKNVPN-WHRDLERVCENIPIVLCGNKVDIKDRKVKAK 156
Query: 474 VTTQEGKK 497
T KK
Sbjct: 157 AITFHRKK 164
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 71.7 bits (168), Expect = 6e-13
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQED 284
KI ++GD VGK+ LL +TRNEF E T+ + I V+G+ ++ +WDTAGQE
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDLRSS 461
Y + Y ++ Y + + ++++ V +W E++ H ++ ++LV K DL+
Sbjct: 74 YRAITSAYYRGAVGAVLVYDLTKQKTFQD-VERWLLEVREHADPTIVVMLVGNKCDLK-- 130
Query: 462 DKAVVTTQEGKKLKKKIRAAHLVECSALE 548
V + + KK + A +E SAL+
Sbjct: 131 HLRAVASDDAKKYGDEHGLA-FIEASALD 158
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 70.9 bits (166), Expect = 1e-12
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ V+GD VGK+ L+ + +EF + T+ D ++ +DG+ V++ LWDTAG+E
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEK 71
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPI-VLVATKIDLRSS 461
Y L + + L+ + V + S++++ W E S S I +LV K D
Sbjct: 72 YRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCD--KK 129
Query: 462 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
DK V+ ++ + L + L E SA + N++E FE
Sbjct: 130 DKK-VSEEDIQNLSSCYNLSWL-ETSAKDNTNVNEAFE 165
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 70.9 bits (166), Expect = 1e-12
Identities = 44/162 (27%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 287
KI+++G G VGKT LL + ++F E++VPTV D ++ + +DG + DTAG +
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDTAGTYAF 73
Query: 288 ERLRPLSYTQTNCFLVCYSVGSRSSYE---NVVHKWYP-ELKHFSASVPIV--LVATKID 449
+R L+ F+V +++ S SS+ ++ + Y ++K S + I+ LVA K+D
Sbjct: 74 PVMRRLAIHTCQAFIVVFAINSESSFREAFEIIDEIYSIKVKAGSEAKKIILNLVANKLD 133
Query: 450 LRSSDKAVVTTQEGKKLKKKI-RAAHLVECSALERINMDEVF 572
+ ++ + + +L K+ +E S++ ++ F
Sbjct: 134 IDCRERVITAARAHAELSKRSWLTGEYMEISSMLNFRVERTF 175
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 70.1 bits (164), Expect = 2e-12
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
K K+ V+G G VGK+ L + +F E+Y PT+ D Y I VD + + DTAG
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGT 61
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDLR 455
E + +R L FL+ YS+ +R ++ ++ L+ S +VPIVLV K D+
Sbjct: 62 EQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDI- 120
Query: 456 SSDKAVVTTQEGK 494
D+ V+T K
Sbjct: 121 -YDEREVSTSNAK 132
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 69.7 bits (163), Expect = 2e-12
Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 SDVAARTMGTTKRL-KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDG 239
S + + T +R+ K+ +GD VGK+ L+ + +++ + T+ D + + V+G
Sbjct: 883 SQASPTRLKTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNG 942
Query: 240 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKH-FSAS 416
+ + + LWDTAGQE + + + + + L+ Y V + SS+ N + KW ++
Sbjct: 943 QCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTN-LKKWMVSVEEGAEEG 1001
Query: 417 VPIVLVATKIDLRSSDKA-VVTTQEGKKLKKKIRAAHLVECSALERINMDE 566
V +++ K DL +++ VV T +GK L + A ++ E SA N+ E
Sbjct: 1002 VAKMVLGNKTDLAEDEESRVVKTIDGKNLANQYDALYM-ETSAKTGNNIQE 1051
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 67.7 bits (158), Expect = 1e-11
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Frame = +3
Query: 207 DNYVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKW 386
D++ G I VD + + + + Q Y++LR Y T+ FLVC+SV + S ++VV++W
Sbjct: 102 DSWSGPIIVDNKAYNIEIHECTSQTAYDQLRAELYPDTDVFLVCFSVTLQQSLKDVVNRW 161
Query: 387 YPELKHFSASVPIVLVATKIDLR--SSDKAV--------VTTQEGKKLKKKIRAAHLVEC 536
PEL+ F P +L+ T I+ R S D+A + + G +K A +EC
Sbjct: 162 VPELRRFCPVTPFLLIGTHINWRLLSEDRAATIDPARRPIFPETGAMYAEKHGAVRYMEC 221
Query: 537 SALERINMDEVFE 575
+ + + +F+
Sbjct: 222 ATNDATAVKGIFD 234
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 67.3 bits (157), Expect = 1e-11
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Frame = +3
Query: 177 FPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGS 353
F Y+ T+ D + I +DGE V++ +WDTAGQE + + Y T+ +V Y V S
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 354 RSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVE 533
++ N V +W E+ V +LV K D S K VV T + +K +++ + E
Sbjct: 62 ADTFVN-VKRWLHEIDQNCDDVIRILVGNKDDCPS--KKVVETADLQKFGEQMN-IRVFE 117
Query: 534 CSALERINMDE 566
SA E IN++E
Sbjct: 118 TSAKENINVEE 128
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGE-DVEMALWDTAGQED 284
++ V+G G VGKT L+ + F E+Y PTV D Y +T+ + + + + DTAG
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAGSYP 168
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 464
+ ++ L+ + F++ YSV ++S + + + +VP+VLV K DL S +
Sbjct: 169 FPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDLVSEE 228
Query: 465 KAVVTTQEGKK 497
T + +K
Sbjct: 229 LRQSTRAQMRK 239
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 65.3 bits (152), Expect = 5e-11
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Frame = +3
Query: 186 EYVPTVFDNYVGHITVDGEDVEMALW-----DTAGQEDYERLRPLSYTQTNCFLVCYSVG 350
EY PT Y ++ + V +++ DT G + +RPL+Y + F++C+ V
Sbjct: 48 EYKPTALKAYSTNVYSNPTGVVYSVYQANIVDTGGSTVLDYVRPLAYIHADLFILCFDVT 107
Query: 351 SRSSYENVVHKWYPELKHFSASVPIVLVATK 443
+R+S+ENV KW+PE++ + VP++LV K
Sbjct: 108 NRASFENVASKWFPEIRLYEKKVPLMLVGLK 138
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 62.1 bits (144), Expect = 5e-10
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLY--------------VYTR-------NEFPEEYVPTV-FDNYVG 221
K+ ++GD VGK+CLL +Y+ + + E Y+ T+ D +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 222 HITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
I +DG+ +++ +WDTAGQE + + Y + +V Y V + S+ N V +W E+
Sbjct: 70 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNN-VKQWLQEID 128
Query: 402 HFSA-SVPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
++ +V +LV K DL + K VV K+ + + L E SA N+++ F
Sbjct: 129 RYACENVNKLLVGNKCDL--TTKKVVDFTTAKEYAESLGVPFL-ETSAKNATNVEQAF 183
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 62.1 bits (144), Expect = 5e-10
Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
Frame = +3
Query: 114 TVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDTAGQEDYE 290
T+ DG VGK+ L+ + +F + T+ ++ + +DGE + +WDTAGQE ++
Sbjct: 215 TLSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFK 274
Query: 291 RLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFS-----ASVPIVLVATKIDLR 455
LR Y ++ L+ Y+V S+ N + W E +++ + P +L+ K+D+
Sbjct: 275 SLRTPFYRGSDLCLLVYAVDDAKSFTN-LSMWKKEFLYYADVRDQDNFPFILLGNKVDV- 332
Query: 456 SSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
+ V+ +E ++ E SA + N+++ F
Sbjct: 333 --EGRAVSQEEADSWCRQNGGVPYFETSAKDSTNVNDAF 369
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 62.1 bits (144), Expect = 5e-10
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ VVGD VGKT L+ +T+ F + TV D + + G+ V++ WDTAGQE
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEK 72
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSD 464
+ + Y + ++ + + +R ++ ++ K+ + ++ VLV K DL+ +
Sbjct: 73 FRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKGAS 132
Query: 465 KAVVT 479
+ V T
Sbjct: 133 RKVNT 137
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+R I G VGKT L+ + F ++Y PT+ D ++ H+ + E E+ + DT+G
Sbjct: 27 RRFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFIKHVFFNNETYELQIIDTSGT 86
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDL-R 455
++ +R + + + F++ YS S+ + L+ P ++V K DL
Sbjct: 87 YEFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNRHPCIVVCNKNDLPL 146
Query: 456 SSDKAVVTTQEGKKLKKKIRAAHLV---------ECSALERINMDEVF 572
++ V+T G +I A HLV +CSA E ++++F
Sbjct: 147 ATHLGVLTDHRG----LRISAQHLVQTEWQSLWIDCSAKENSQVEDIF 190
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 58.8 bits (136), Expect = 4e-09
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
KI +GD VGK+ L + + F E+Y PT+ D + +D +V + +WDTAGQE
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDLRSS 461
+ L + L+ + + + +S+E+ V W ++ I++V K+D S
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFES-VGDWVKMVRDERGEKAVIIIVGNKMD--ES 281
Query: 462 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
D+ V+ +K +++ ++ VE SA N+ +F
Sbjct: 282 DRRKVSYDVAEKSAERLGLSY-VETSAKSGYNVKLLF 317
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 58.4 bits (135), Expect = 6e-09
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Frame = +3
Query: 237 GEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSA 413
G+ +++ +WDTAGQE + + Y ++ Y V + S+ N + KW ++ H +
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSN-ISKWLKKIDDHANE 60
Query: 414 SVPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
V +LV K D+ DK V++ +G++L +E SAL IN+++ F
Sbjct: 61 DVKRMLVGNKCDM--YDKRVISQTKGEQLASSY-GISFIETSALSNINVEKSF 110
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FD-----------NYVGHITVDGEDV 248
+K +GD VGKT LLY YT + F +VPT+ D N G + G+ +
Sbjct: 107 IKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRI 166
Query: 249 EMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
+ LWDTAGQE + L + FL+ + + S+ N + W +L+
Sbjct: 167 HLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVN-IRNWLSQLQ 216
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 57.2 bits (132), Expect = 1e-08
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
K K+ V+G G VGK+ L + +F E+Y PT+ D Y TAG
Sbjct: 2 KEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFY----------------HTAGT 45
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-HFSASVPIVLVATKIDLR 455
E + +R L FL+ YS+ +R ++ ++ L+ S +VPIVLV K D+
Sbjct: 46 EQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDI- 104
Query: 456 SSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
D+ V+ E K L + E SA R N+D+VF
Sbjct: 105 -YDEREVSVGEAKDL-AEAWGCPFYETSAKTRSNVDKVF 141
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ ++G+ VGKT L+ Y + F +V TV D V + + + V++ +WDTAGQE
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
Y + Y F++ Y + + S++ V
Sbjct: 83 YRTITTAYYRGAMGFILMYDITNEESFQAV 112
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTAGQED 284
K+ ++G+ VGKT L Y N F T+ D+ + + + V +++WDTAG E
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDL 452
+ + Y + ++ ++V S + ++H W + F VLVA KIDL
Sbjct: 73 FRTVTKNYYRGAHACILMFNVDDPGSLQYLLH-WIHDTDEFCPDALKVLVANKIDL 127
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ-ED 284
+I ++GD VGKT LL + + F EY PT+ D Y I +D V + + DTA + ++
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASRGQN 66
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK 401
+LR + + F+V YS RS++ N +H++ +K
Sbjct: 67 SCKLRDQFVREGDGFIVVYSTADRSTFAN-LHRYRDMMK 104
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 53.6 bits (123), Expect = 2e-07
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEY--VPTVFDNYVGHITVDGEDVEMALWDTAGQE 281
KI + G VGKT + + +EFPEE + + ++ + + + +++ LWDT G E
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGME 69
Query: 282 DYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSS 461
+YE L Y+ + LV YS+ S V + + + + IVLVA K+DL +
Sbjct: 70 EYESLTRNHYSNSKVVLVVYSLDLPDSLAQ-VKECTQSAQVNAPAAKIVLVANKMDL-PN 127
Query: 462 DKAVVTTQEGKKLKKKIRAAHLVECSA 542
+ + T K++ K H SA
Sbjct: 128 YRRLETDLRVKEMFPKTEYEHQFRISA 154
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M K KI V+G VGK+ L + +F + Y PT+ + + +I G++ + L D
Sbjct: 1 MAPPKSRKIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVD 60
Query: 267 TAGQEDYERLRPLSYTQ-TNCFLVCYSVGS 353
TAGQ++Y + P SY+ + +++ Y+V S
Sbjct: 61 TAGQDEYS-IFPQSYSMGIHGYILVYAVTS 89
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 51.2 bits (117), Expect = 9e-07
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = +3
Query: 225 ITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKH 404
+ V G+ V++ +WDTAGQE + + Y L+ Y + SR ++ N + W + +
Sbjct: 137 VNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETF-NSLTNWLTDART 195
Query: 405 F-SASVPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
S ++ I+LV K DL +D+ VT E + ++ L E SAL N++E F
Sbjct: 196 LASPNIVIILVGNKKDL-DADRE-VTFLEASRFAQENELMFL-ETSALTGENVEEGF 249
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 50.8 bits (116), Expect = 1e-06
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 9/169 (5%)
Frame = +3
Query: 96 TKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHIT--VDGEDVEMALWDT 269
T+ K+ VVGD + GK + Y N + Y PT+ ++ + + +W
Sbjct: 16 TRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLI 75
Query: 270 AGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELK-----HFSASVPIVLV 434
AGQE + + + Y + +V + + +++ + + KW +L H VP +LV
Sbjct: 76 AGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAI-KWKKDLDSKYKLHSRKPVPCILV 134
Query: 435 ATKIDL--RSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
K DL R DK ++ KL K+ E S E IN+ + E
Sbjct: 135 GNKSDLPDRPVDKEII-----DKLCKEHSFLCWTEMSVKEDINVKKPME 178
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 50.8 bits (116), Expect = 1e-06
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Frame = +3
Query: 111 ITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDYE 290
+ ++G VGK+ LL + F EY PT+ Y T+D + + + DTA YE
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTA--STYE 187
Query: 291 RLRPLSYTQTNCFLVCYSVGSRSSYENV--VHKWYPELKHFSA-SVPIVLVATKIDLRSS 461
P+ +Q F+V YS+ ++E + K E+K A + IVL K DL+
Sbjct: 188 ---PVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHC 244
Query: 462 DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
V+ QE ++ + E SA IN +F
Sbjct: 245 --RAVSRQEAREFAAEHECV-FHETSAANNINTKVIF 278
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 240 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASV 419
+DV++ +WDTAGQE + + Y N ++ Y + +++NV+ +W +++ ++
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVI-RWGEDVQKYAPEN 151
Query: 420 PI-VLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
I +LV K DL + V+ ++ ++E SA + N++ F
Sbjct: 152 AIKLLVGNKKDLERERE--VSLEDAVNCASHYGMLDVLETSAKDATNIEAAF 201
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 48.0 bits (109), Expect = 8e-06
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Frame = +3
Query: 231 VDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFS 410
V+ + + +WDTAGQE ++ L PL Y ++ Y + S++ + + W EL+ +
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHS-LRPWIRELQRYG 62
Query: 411 ASVPIVLVA-TKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
++ VA K D +D+ V Q+ + + A E SAL N+ +FE
Sbjct: 63 PQDIVIAVAGNKCD--KADQRDVQVQDAQDFAGSVDAI-FAETSALTSKNVHWLFE 115
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 48.0 bits (109), Expect = 8e-06
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRN--EFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAG 275
R K+ V GD VGK+ L+ V+ + +P+ Y TV G +V + L +
Sbjct: 5 RAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTV-----------GAEVLVKLVNIPE 53
Query: 276 QEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS---VPIVLVATKI 446
D P N +V Y V + S+ N +KW + + S +P L+ATK
Sbjct: 54 TTDSVWEHP------NLVIVAYDVSNEQSF-NACNKWLERCRSLAKSDNNLPGALIATKT 106
Query: 447 DLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALER 551
DL+ + V++T++GK + ECSA+++
Sbjct: 107 DLK--QRRVISTKQGKDYANS-KNLEYFECSAIQK 138
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 47.2 bits (107), Expect = 1e-05
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 287
++ VVG G VGK+ + Y +NEF E +Y G + D+E+ DTAGQE+Y
Sbjct: 2600 RLCVVGSGGVGKSSVTIRYLKNEFTEI-------DYCGKLY----DIEVV--DTAGQEEY 2646
Query: 288 ERLRPLSYTQTNCFLVCYSVGSRSSYENV------VHKWYPELKHFSASVPIVLVATKI 446
R S + FLV +++ S SS+ + + + + E + + ++P+V+V K+
Sbjct: 2647 TSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEE-SNTTCTIPMVIVGNKM 2704
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
+K+ ++G+ VGK+ L + F EY T+ Y V GE V + L DTAG+
Sbjct: 862 VKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGENS 921
Query: 285 YERL-RPLSYTQTNCFLVCYSVGSRSSYE 368
+L R L + F+V YS+ SR S++
Sbjct: 922 PAKLERCLEIGEV--FVVLYSITSRHSFD 948
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Frame = +3
Query: 384 WYPELKHFSASVPIVLVATKIDLRSSDKAVVTTQE----------GKKLKKKIRAAHLVE 533
WYPE+ H + PIVLV TK+DLR + + +E G ++ K+I A +E
Sbjct: 576 WYPEVSHHCPNTPIVLVGTKLDLRDDKETIDKLKEKKLGPIGYTQGLQMAKEIGAVKYLE 635
Query: 534 CSAL 545
CSAL
Sbjct: 636 CSAL 639
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 3/160 (1%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
+ +++T+VG GKT + V +F E+ +PTV N V +V + +WD GQ
Sbjct: 19 EEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNM---RKVSKGNVTIKVWDIGGQ 75
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-KHFSASVPIVLVATKIDLR 455
+ + NC + E ++ + L K A +PI+++ K DL
Sbjct: 76 PRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGNKKDLP 135
Query: 456 SS--DKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEV 569
+S +K +V ++ + + + C + I D++
Sbjct: 136 NSLDEKELVERLNLTSVQDREICCYSISCKEKDNIGKDKL 175
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Frame = +3
Query: 264 DTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF--SASVPIVLVA 437
DTAGQE+Y +R FL ++V + S+E+ ++++ ++K + VP+VLV
Sbjct: 283 DTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFED-INQYREQIKRVKDAEEVPMVLVG 341
Query: 438 TKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
K DL + V+T + ++L K E SA R +D+ F
Sbjct: 342 NKCDL---PQRTVSTSDAQELAKSYNIP-FQETSAKTRQGVDDAF 382
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 45.6 bits (103), Expect = 4e-05
Identities = 35/175 (20%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Frame = +3
Query: 69 DVAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVF---DNYVGHITVDG 239
++ +R K ++G+ VGK+CL+ F ++V + D + + D
Sbjct: 339 EIISRQPNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDN 398
Query: 240 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFS--- 410
+ +++ + DTAGQE Y + P + + + + ++ +H+W + S
Sbjct: 399 KKIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQ-LHRWIDLARTTSGAD 457
Query: 411 ASVPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFE 575
+++ ++LV K D+ D VT K+ + +E SA + ++ ++F+
Sbjct: 458 SNIQLILVGNKKDM--EDNRAVTYSRAKEF-AAMNGFPYIETSAKDVDSLMDMFK 509
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 44.4 bits (100), Expect = 1e-04
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Frame = +3
Query: 258 LWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL-----KHFSASVP 422
+WDTAGQE ++ L Y +C ++ + V +S++ + W E + P
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFK-TLDSWRDEFLIQASPRDPENFP 59
Query: 423 IVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGSGARGPPQ 602
V++ KIDL + + Q K I E SA E IN+++ F+ Q
Sbjct: 60 FVVLGNKIDLENRAVSAKRAQAWCHSKNDI---PYFETSAKEAINVEQAFQTIAKNALAQ 116
Query: 603 ETSPQTH 623
ET + +
Sbjct: 117 ETDVELY 123
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGH-ITVDGEDVEMALWDT 269
K+ ++GD VGK+ LL +TRNEF E T+ + I VDG+ ++ +WDT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +3
Query: 261 WDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF-SASVPIVLVA 437
W+ AGQE + + Y + ++ Y + R SY N +HKW E++ + S V ++LV
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNN-LHKWLMEVETYASEGVHMILVG 431
Query: 438 TKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
KIDL +D+ V + + + VE SA N+ E F
Sbjct: 432 NKIDL-DTDREV--QPDAAQEWAALHDMPFVETSAKGAKNVKEAF 473
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV--------FDNYVGHITVDGE 242
M ++++I VVGD VGKT L+++ E T+ +D G G+
Sbjct: 1 MAAVEKVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEG--MPGGK 58
Query: 243 DVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFS 410
+ WD G ++E R + Y N ++ + + +R S+ N + KW E+ + S
Sbjct: 59 TFFLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTN-LRKWLAEVLNAS 113
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +3
Query: 84 TMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALW 263
T T++R K++VVGD GKT LL +++ E +F+ V +T ++E LW
Sbjct: 55 THATSERYKLSVVGDAESGKTSLLNALVKSDIEVEET-VIFEECVTDVTSGDSNLEFMLW 113
Query: 264 DTA 272
D++
Sbjct: 114 DSS 116
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 93 TTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTA 272
TTK +++ V+G VGK+ L + F EY T+ + + +D EDV + + DTA
Sbjct: 13 TTKPVRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDTA 72
Query: 273 GQ 278
G+
Sbjct: 73 GE 74
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 81 RTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHI 227
R+ K+L I V+G+G VGK+ L+ + F EEYVPT+ + H+
Sbjct: 20 RSSAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEEFVSKHL 68
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 40.3 bits (90), Expect = 0.002
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQED 284
L++ +VG GKT +LY +E P +PT+ N V+ ++++ +WD GQ+
Sbjct: 91 LRLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVE---VVEYKNIKFTVWDIGGQDK 146
Query: 285 YERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATKIDLRSS 461
L L + +T + R + + + LK ++++A K DL S
Sbjct: 147 IRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAALLVLANKQDLPDS 206
Query: 462 DKAVVTTQEGKKL 500
+ TT+ +KL
Sbjct: 207 ---MSTTELSEKL 216
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 40.3 bits (90), Expect = 0.002
Identities = 34/111 (30%), Positives = 49/111 (44%)
Frame = +3
Query: 258 LWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVA 437
LWDT G E+YE L Y+ + LV YS+ S V + + + + IVLVA
Sbjct: 3 LWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQ-VKECTQSAQVNAPAAKIVLVA 61
Query: 438 TKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGSGAR 590
K+DL + + + T K++ K H SA + D SG R
Sbjct: 62 NKMDL-PNYRRLETDLRVKEMFPKTEYEHQFRISA--KTGEDPQLMASGQR 109
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGHITVDGEDVEMALWDTA 272
KI ++GD VGK+ LL YT+NEF T+ + ++ ++G+ V +WDTA
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/87 (33%), Positives = 44/87 (50%)
Frame = +3
Query: 288 ERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVPIVLVATKIDLRSSDK 467
ER+ T + F++ YS+ SR S+ V + +Y + A IVL+A K DL K
Sbjct: 1049 ERMLEDRVTWGDAFVLIYSITSRESFHAVWNYYYHVVTSIEAKPVIVLLANKHDL--GHK 1106
Query: 468 AVVTTQEGKKLKKKIRAAHLVECSALE 548
V T EG+++ + I+ E SA E
Sbjct: 1107 RKVLTTEGRQMAQAIKCP-FYEVSASE 1132
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +3
Query: 201 VFDNYVGHITVD----GEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYE 368
VFD + H+ D G +V +++ DTAG+E Y L + +V Y + SS +
Sbjct: 254 VFDANIAHLFADNGNLGINVTISM-DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLK 312
Query: 369 NVVHKWYPELKHFSASVPIVLVATKIDLRSSDKAVVTTQEGKKLKK 506
+ + L+ + +V+V K DL + D +T G +L K
Sbjct: 313 VLNDRHLHLLQAAEPNCLVVIVGCKKDLVTDDTREITEAAGMELAK 358
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 87 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWD 266
M + L + V+G VGK+ F EY P + NY + +DG+ + + + D
Sbjct: 176 MTNNRALSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLD 235
Query: 267 TAGQEDYE-RLRPLSYTQT 320
TAG+ E R+ P T+T
Sbjct: 236 TAGKVSREARMSPRQKTKT 254
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 162 YTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCY 341
+ F EY P + +Y H+TV G+ + M + DTAG+ +++ L N + Y
Sbjct: 6 FITRRFIGEYDPCLEASYRHHLTVHGQYIAMDVVDTAGKNTPDKVDAL-LEAANIVYLLY 64
Query: 342 SVGSRSSYE 368
SV R+S+E
Sbjct: 65 SVTDRASFE 73
>SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1153
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/103 (21%), Positives = 50/103 (48%)
Frame = +3
Query: 240 EDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASV 419
+++ + LWD+ G++ L+PL T +++ ++V + + ++ W+ ++ +
Sbjct: 406 DNLTVELWDSGGRQCLFGLQPLFLTDQTLYVMTFNVNNPMEIK-LMPNWFFLVQTKAPGS 464
Query: 420 PIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALE 548
P++LV T D D T G K+ K ++ A C ++
Sbjct: 465 PVILVGTNADDHQED----YTPIGNKVLKAVQEAEEEHCQEIQ 503
>SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 279 EDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHK 383
E+YE +R Y T+ FLVC+ +G+ SS ++V+ K
Sbjct: 3 ENYESIRRQMYLDTDVFLVCFDIGNPSSLQSVIDK 37
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDT 269
K+ ++G VGKT L+ + F E++PT+ D + + DG + L DT
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTIDDYIIHALNQDGVHYNVCLVDT 242
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDY 287
+I V G VGKT ++ + +F EEY PTV D Y + +G + + D++G +
Sbjct: 10 EIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLNTTDSSGSYQF 69
Query: 288 ERLRPLS 308
+R ++
Sbjct: 70 PAMREVA 76
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 37.5 bits (83), Expect = 0.012
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Frame = +3
Query: 210 NYVGHITVDGEDVEMALWDTAGQEDY-----ERLRPLSYTQTNCFLVCYSVGSRSSYENV 374
++ + + G+ V + + DT G+ E PL Y + ++ + V R S+E V
Sbjct: 5 DFFERLELRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERV 64
Query: 375 VHKWYPELK-HFSASVPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALER 551
W +++ H +P+VLV K D + + + K +E SAL
Sbjct: 65 P-TWLDKVQEHCGHEIPVVLVGNKTDRPLNSWKIPSNVAAKYATNN--GFLYIETSALGM 121
Query: 552 INMDEVF 572
N+DE+F
Sbjct: 122 CNIDEIF 128
>SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 213 YVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYE 368
Y H+ VDG+ + + + DTAG+ E++ T F + YSV R+S++
Sbjct: 4 YRHHLIVDGQFISLDIMDTAGKNSVEKM-STCLTFAELFFIVYSVTDRTSFD 54
>SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34)
Length = 240
Score = 36.7 bits (81), Expect = 0.021
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Frame = +3
Query: 111 ITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDYE 290
+TV+G GKT LL Y RN E ++G +V D ++A DT G E +
Sbjct: 94 VTVMGHVDHGKTSLLD-YIRNANVIEGESGGITQHIGAYSVKVGDQKIAFLDTPGHEAFT 152
Query: 291 RLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATKIDLRSSDK 467
+R T+ ++ + ++V+ + + H A+ VPI+ KID +++
Sbjct: 153 AMRARGAQVTDLVIIVVAAD-----DDVMPQTKEAISHAQAAGVPIIFAINKIDKPNANP 207
Query: 468 AVVTTQ 485
+ TQ
Sbjct: 208 DNIKTQ 213
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 36.3 bits (80), Expect = 0.027
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 381 KWYPELKHFSAS-VPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERIN 557
KW +++ + V I+LV K DL SDK VT +EG++ K++ +E SA N
Sbjct: 19 KWIDDVRTERGNDVIIMLVGNKTDL--SDKRQVTAEEGERKAKELNVM-FIETSAKAGYN 75
Query: 558 MDEVFEGSGARGPPQETSPQ 617
+ ++F A P E++ +
Sbjct: 76 VKQLFRRVAAALPGMESTTE 95
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 35.9 bits (79), Expect = 0.036
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 228 TVDGEDVEMALWDTAGQEDYERLRPLSY 311
+ +GED+ + LWDTAGQE+++ + Y
Sbjct: 28 SANGEDIRLMLWDTAGQEEFDAITKAYY 55
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 35.5 bits (78), Expect = 0.047
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +3
Query: 63 LSDVAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGE 242
+S + R G K+++I +VG GKT +LY E +PT+ N +V+ +
Sbjct: 5 ISSLFTRLFGK-KQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---SVEYK 59
Query: 243 DVEMALWDTAGQEDYERLRPL 305
++ +WD GQ +++RPL
Sbjct: 60 NISFTVWDVGGQ---DKIRPL 77
>SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06)
Length = 138
Score = 35.5 bits (78), Expect = 0.047
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = +3
Query: 198 TVFDNYVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSY---E 368
T ++ I G+ ++ + D+AGQE+Y R S + FLV +++ S SS+ +
Sbjct: 7 TFYNLMFNQIDYCGKLYDIEVVDSAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELK 66
Query: 369 NVVHKWYPELK--HFSASVPIVLVATKI 446
++ K E K + + ++P+V+V K+
Sbjct: 67 DLRGKIIREHKESNTTCTIPMVIVGNKM 94
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 35.5 bits (78), Expect = 0.047
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 99 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQ 278
K ++I +VG GKT +LY E +PT+ N TV+ +++ +WD GQ
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 71
Query: 279 EDYERLRPL 305
+++RPL
Sbjct: 72 ---DKIRPL 77
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 34.7 bits (76), Expect = 0.083
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 423 IVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVF 572
+VLV K DL D+ VV +G+ L K+ +E SA +IN++E+F
Sbjct: 1 MVLVGNKCDLE--DERVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIF 48
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 90 GTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPT 200
G +KI + GD GKTC+ + F E+Y+PT
Sbjct: 221 GVHYNMKIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 33.1 bits (72), Expect = 0.25
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 13/129 (10%)
Frame = +3
Query: 102 RLKITVVGDGMVGKTCLLYVYTRNEFPEEY--VPTVFDNYVGHITVD-----------GE 242
R+K+ VVG GKT LL P V V D + I+ G
Sbjct: 666 RMKLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVDEWSVQISTSLLSRIGITSGIGP 725
Query: 243 DVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSASVP 422
+ ++ WD AGQ Y + T + +L ++ + W +K +
Sbjct: 726 TITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIKARAPYSD 785
Query: 423 IVLVATKID 449
++++ T +D
Sbjct: 786 VIIIGTHLD 794
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 33.1 bits (72), Expect = 0.25
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = +3
Query: 93 TTKRLKITVVGDGMVGKTCLL-YVYTRNEF---PEEYVPTVFDNYVGHITVDGEDVEMAL 260
T K+ K+ +VGD VGK+ ++ + + +E Y PT + + T + L
Sbjct: 10 TYKQYKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTT-GGHASYFTA-SNSCHLYL 67
Query: 261 WDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKW 386
DT+G E+Y L + +C + +++ S + + KW
Sbjct: 68 LDTSGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSS-LEKW 108
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 32.7 bits (71), Expect = 0.33
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV 203
K+ ++GD VGKTC+L+ ++ + F ++ T+
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 32.7 bits (71), Expect = 0.33
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +3
Query: 213 YVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENV--VHKW 386
Y + + +E+ + DTAG + + + F+V YS+ SYE + K
Sbjct: 4 YEKELRIGDSSMELDILDTAGNGEASYIH-----NGDGFVVVYSITDYYSYEMARQLVKL 58
Query: 387 YPELKHFS--ASVPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINM 560
+++ +PIVLV K DLR V E ++ + +H E SAL N+
Sbjct: 59 VTQVRKTDDICQIPIVLVGNKRDLRRG--RCVAKDEAREFASEYGCSH-YETSALTNRNV 115
Query: 561 DEVF 572
+F
Sbjct: 116 HVIF 119
>SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059)
Length = 141
Score = 32.3 bits (70), Expect = 0.44
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Frame = +3
Query: 384 WYPELKHFSASVPIVLVATKIDLRSS--------------DKA-VVTTQEGKKLKKKIRA 518
W PELK VP +L+ K DLR+ D A ++ + I A
Sbjct: 1 WAPELKEACPGVPYLLIGCKNDLRTDSALELNFLSVPGEPDNADSISRLRAIATAQSIGA 60
Query: 519 AHLVECSALERINMDEVFEGSGARGPPQETSPQTHLP 629
VEC A R N+ EVF+ + +E S T P
Sbjct: 61 RQYVECCAKMRWNIKEVFQQAAEAILSKEDSNNTEAP 97
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV 203
K+ +VGD VGKT + Y EY PT+
Sbjct: 24 KVLIVGDATVGKTSFVQRYVHGNTRREYKPTI 55
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 31.9 bits (69), Expect = 0.58
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +3
Query: 246 VEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHF-SASVP 422
V++ WD A E + ++ + + LV + S S + + KW ++K S SVP
Sbjct: 108 VKLQFWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSAL-KWSEKVKEANSGSVP 166
Query: 423 IVLVATKIDLRSSDKAVVTTQEGKKLKKK 509
+VLV I K + +GK + K
Sbjct: 167 MVLVVENIPPSKRGKPMEWIGKGKTAESK 195
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ + + VG ++S S +V + + +PS + I + M R A S
Sbjct: 38 TPSPNITSYPSLMKSAVGNFTSATSVVVDSTTPNATRLVPSSSASISPNVTINMTREANS 97
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 98 TMILPSTSVPYNTTL 112
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S +V + + +PS + I + M R A S
Sbjct: 641 TPSPNITSYPSLMTSAVGNFTSATSVVVDSTTPNATRLVPSSSASISPNVTINMTREANS 700
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ + + VG ++S S + + + +PS + + F + M R A S
Sbjct: 1043 TPSPNITSYPSLMKSAVGNFTSATSVVFDSTTPNATRLVPSISASVSPNFTINMTREANS 1102
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 1103 TMILPSTSVPYNTTL 1117
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 239 TPSPNITSYPSLMTSAVGNFTSAKSVVFDSTTPNATTLVPSISASISPNVTINMTRKANS 298
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 299 TMILPSTSVPYNTTL 313
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 1445 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRLVPSISASISPNVTIDMTREANS 1504
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 1505 TMILPSTSVPYNTTL 1519
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 1646 TPSPNITSYPSLMTSAVGNFTSAKSVVFDSTTPNATRVVPSISASISPNVTINMTREANS 1705
Query: 67 DKPISPQNSRFKTL 26
+ + + T+
Sbjct: 1706 TMILPSTSVPYNTM 1719
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 440 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRVVPSISASISPNVTINMTREANS 499
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ ++ VG ++S S + + + +PS + I + M R A S
Sbjct: 842 TPSPNITSYPSLTTSAVGNFTSATSVVFDSTTPNATRLVPSISASISPNVTIDMTREANS 901
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 902 TMILPSTSVPYNTTL 916
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 31.5 bits (68), Expect = 0.77
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS T I + M R A S
Sbjct: 239 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSITASISPNVTINMTREANS 298
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 299 TMILPSTSVPYNTTL 313
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 440 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISASISPNVTINMTREANS 499
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 500 TMILPSTSVPYNTTL 514
>SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 168 RNEFPEEYVPTVFDNYVGHITVDGEDV-EMALWDTAGQED 284
R ++ Y+P +YV H T +GEDV E L AG D
Sbjct: 465 RGKYQVSYLPNTPGDYVTHCTFNGEDVPESPLRSVAGDPD 504
>SB_48977| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 725
Score = 30.7 bits (66), Expect = 1.4
Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Frame = +3
Query: 63 LSDVAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGE 242
L ++ +G+ ++LKITV+ + CL YV + PE+ + + D
Sbjct: 358 LYELVFMNLGSLEKLKITVIETYIKTYRCLFYVSIILDKPEQAL-LASEQGRSRALKDSL 416
Query: 243 DVEMALWDTAGQEDYERLRP--LSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFSAS 416
+ L A ++ R R +S T+ ++C S+ +W L ++
Sbjct: 417 QKKYGLESNAPSDEDTRYRSSLISEDNTSFVVICLSL-----------EWL-HLFTLASG 464
Query: 417 VPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALERINMDEVFEGSGARGP 596
P+V + ++ SS ++ + +E + L+ I + E +A R+N DE FE R
Sbjct: 465 KPLVTESVPKEIFSSVESEINGKELEWLRDYIDRM-VNEANAHVRLNRDESFEDRSLRLS 523
Query: 597 PQETSPQTHLPISLMKKNAT 656
+ ++ P S++ + A+
Sbjct: 524 CDDDGDESRQP-SVLARGAS 542
>SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46)
Length = 572
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 222 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTPVPSISASISPNVTINMTRGANS 281
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 282 TMILPSTSVPYNTTL 296
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I M R A S
Sbjct: 21 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISASISPNVTTNMTREANS 80
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I M R A S
Sbjct: 423 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISASISPNVTTNMTREANS 482
>SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 29.9 bits (64), Expect = 2.4
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 5/160 (3%)
Frame = +3
Query: 111 ITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALW-DTAGQEDY 287
+T++G GKT LL RN ++G V E + DT G +
Sbjct: 31 VTIMGHVDHGKTTLLDAL-RNSSVAAGEAGGITQHIGAFLVKLPSGEKITFIDTPGHAAF 89
Query: 288 ERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKH-FSASVPIVLVATKIDLRSSD 464
+R T+ ++ + + V ++H A VP+++ KID +
Sbjct: 90 NSMRARGANVTDIVVLVVAADDGVKTQTV-----ESIRHAMHAKVPLIVAINKIDKPKKN 144
Query: 465 KAVVTTQ---EGKKLKKKIRAAHLVECSALERINMDEVFE 575
++ Q G +L++ +VE SAL+ IN+D + E
Sbjct: 145 LNLLKQQLLTNGIQLEEYGGEVQVVEISALKGINLDSLSE 184
>SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5)
Length = 737
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 350 TPSPNITSYPSLMTSAVGNFTSAKSVVFDSTTPNATTLVPSISASISPNVTINMTRKANS 409
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 410 TMILHSTSVPYNTTL 424
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = -2
Query: 247 TSSPSTVMWPT*LSNTVGTYSSGNSFLVYTYSKQVLPTIPSPTTVIFNLFVVPMVRAATS 68
T SP+ +P+ +++ VG ++S S + + + +PS + I + M R A S
Sbjct: 149 TPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATRLVPSISASISPNVTINMTREANS 208
Query: 67 DKPISPQNSRFKTLL 23
+ + + T L
Sbjct: 209 TMILPSTSVPYNTTL 223
>SB_53706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 414 SVPIVLVATKIDLRSSDKAVVTTQEGKKLKKKIRAAHLVECSALE---RINMDEVFEGSG 584
SVP+++ K+ +R D V E K+ +AAH + + + +D+ G+
Sbjct: 719 SVPLLITKVKLLIRLEDVVAVDVLERFSCKRDFQAAHGISADVVHDDGDVEIDDTLPGAS 778
Query: 585 A-RGP-PQETSP 614
A RG ET+P
Sbjct: 779 ADRGAGDDETTP 790
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 29.9 bits (64), Expect = 2.4
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 4/158 (2%)
Frame = +3
Query: 117 VVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDYERL 296
++G GKT +LY E VPT+ N TV +++ +WD GQ+ L
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVST-VPTLGFNVE---TVTYKNISFTVWDIGGQDKIRAL 56
Query: 297 RPLSYTQTNCFLVCYSVGSRSSYE---NVVHKWYPELKHFSASVPIVLVATKIDLRSSDK 467
+ Y + R E N +HK E + V ++++A K D+ +
Sbjct: 57 WRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEE--LQQVILLVIANKQDMAN--- 111
Query: 468 AVVTTQEGKKLK-KKIRAAHLVECSALERINMDEVFEG 578
A+ ++ +KLK +IR SA + + +FEG
Sbjct: 112 AMTASEIREKLKLNEIRGRPWFVQSAC-AVKGEGLFEG 148
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 96 TKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGHI----TVDGEDVEMALW 263
+KR+K+ ++G+ GKT + E + T+ D VG + V+ + +E+ +
Sbjct: 258 SKRIKLVLLGESGAGKTSCAHGLVECEAINQ---TLNDGTVGVVIRNWQVEPDGLEVQVV 314
Query: 264 DTAGQEDYERLRPLSYTQTNCFLVCYSVGS 353
D AGQ Y+ P ++ L+ ++ S
Sbjct: 315 DCAGQRRYQLTHPFFLSEEALHLLVINLHS 344
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 108 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYV 218
K+ V+GD VGKT L+ Y F Y TV N V
Sbjct: 673 KVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFNIV 709
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 28.7 bits (61), Expect = 5.5
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +3
Query: 141 KTCLLYVYTRNEFPEEYVPTVFDNYVGHITVDGEDVEMALWDTAGQEDYERLRPLSYTQT 320
KT +LY E VPTV N V I+ +++ ++WD GQ+ RL +
Sbjct: 122 KTTILYKLKLKETVNT-VPTVAFN-VETIS-PCKNITFSVWDIGGQDKIRRLWRHYFQGA 178
Query: 321 NCFLVCYSVGSRSSYENVVHKWYPELKHFSAS-VPIVLVATKIDL 452
+ + V + L+H + VP+V+VA K DL
Sbjct: 179 EGIIFVVDSADKERIFEVREELTRVLQHSELNGVPVVVVANKQDL 223
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 105 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPT 200
LK+ ++GD VGKT LL + E + +PT
Sbjct: 13 LKVLLIGDSNVGKTKLLLTFLGQESIVQQMPT 44
>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
Length = 479
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +3
Query: 231 VDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPELKHFS 410
+ G + + WD G DY +R Y QT L+ V SS E +LK++
Sbjct: 7 IHGVEYRINFWDFGGDPDYNEIRSELYGQTQIDLISRRV--ISSKEGQKWARAQDLKYYE 64
Query: 411 AS 416
S
Sbjct: 65 TS 66
>SB_19176| Best HMM Match : YGGT (HMM E-Value=1.1)
Length = 409
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +3
Query: 219 GHITVDGEDVEMALWDTAGQEDYERLRPLSYTQTNCFLVCYSVGSRSSYENVVHKWYPEL 398
GH+TV+ E W A ++ R RP TN L R H W+
Sbjct: 190 GHVTVE----EFQSWFEAIEKPRRRNRPAMSYVTNPLL-------RKLQVVAAHHWFDYF 238
Query: 399 KHFSASVPIVLVATKIDL 452
F ++V +V V+ ++DL
Sbjct: 239 GDFISAVNVVFVSIELDL 256
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,582,644
Number of Sequences: 59808
Number of extensions: 500373
Number of successful extensions: 1651
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 1426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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