Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30320
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 95 4e-20
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 91 9e-19
SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034) 44 1e-04
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 44 1e-04
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 40 0.002
SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11) 40 0.003
SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) 36 0.027
SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0) 35 0.081
SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15) 34 0.14
SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042) 34 0.14
SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015) 33 0.19
SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05) 33 0.33
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 31 0.76
SB_31847| Best HMM Match : Sugar_tr (HMM E-Value=4.6e-05) 31 1.00
SB_20394| Best HMM Match : SbmA_BacA (HMM E-Value=6.2) 31 1.00
SB_14846| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012) 30 2.3
SB_51293| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_34212| Best HMM Match : EGF (HMM E-Value=1.1e-05) 30 2.3
SB_42090| Best HMM Match : Ldl_recept_a (HMM E-Value=0.54) 30 2.3
SB_2808| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_37206| Best HMM Match : MFS_1 (HMM E-Value=3.4e-17) 29 3.0
SB_20421| Best HMM Match : Xlink (HMM E-Value=1.5e-18) 29 3.0
SB_11833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_59015| Best HMM Match : Arif-1 (HMM E-Value=0.62) 29 5.3
SB_40134| Best HMM Match : Calx-beta (HMM E-Value=0) 29 5.3
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06) 28 7.0
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 95.5 bits (227), Expect = 4e-20
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 3/204 (1%)
Frame = +1
Query: 136 AISMAQFGLVFGITAILIPQLQSQ-KPVMLIDESTESWIAAIPGFALLFGNFTIPTIMGK 312
A+ FG G ++ + L ++ K + + S SW +++ + G +
Sbjct: 52 ALGPLSFGFCLGYSSSALEDLIAESKESVKLTVSQGSWFSSLVTLGAILGAPLGGWTLEY 111
Query: 313 YGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGEYTSPKY 492
+GRK + +P VGW+LI A++ Y + RF+ G+++GM + P+ I E +SP
Sbjct: 112 FGRKGTIMACAVPFEVGWMLIAYANSHYMLYIGRFITGLAVGMVSLTVPVYIAEISSPSL 171
Query: 493 RGAFLSSLCLVMAMATLTVHSVGSYVTWQWTAFVCSVITFIDLLIVIN--SPESPSWLAD 666
RG S L + M L +S+G + W+W A CS F LL+V+ PE+P W
Sbjct: 172 RGMLGSVNQLAVTMGLLLAYSMGVVLKWRWLA--CSGAIFPALLVVLMFFVPETPRWSLS 229
Query: 667 QGKYEDCRKVFIWLRGDTENEELE 738
+ D +W RG + E E
Sbjct: 230 HKRRRDALDAMMWFRGPEADVEEE 253
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 91.1 bits (216), Expect = 9e-19
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 1/194 (0%)
Frame = +1
Query: 136 AISMAQFGLVFGITAILIPQLQSQKPVMLIDESTE-SWIAAIPGFALLFGNFTIPTIMGK 312
A+ FG G ++ QL+++ L + E +W ++ + G ++
Sbjct: 48 ALGPLSFGYCMGYSSAATTQLENKNATDLYLNADEITWFGSLLNIGAMLGGPIQGFLIDL 107
Query: 313 YGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGEYTSPKY 492
GRK A I++ +P GWLLI N + A RF+ G+ +GM++ P+ I E S
Sbjct: 108 IGRKFALILTSVPFCSGWLLIGFGKNAAMLNAGRFMSGLGVGMASLNVPVYISETASFSN 167
Query: 493 RGAFLSSLCLVMAMATLTVHSVGSYVTWQWTAFVCSVITFIDLLIVINSPESPSWLADQG 672
RGA S L + L +++G W+W+A S + ++++ PE+ WL +
Sbjct: 168 RGAMGSINQLGITAGILISYAIGYAFDWRWSAVAGSFPAALLVVLMAFMPETARWLIAKK 227
Query: 673 KYEDCRKVFIWLRG 714
K RK +WLRG
Sbjct: 228 KETRARKTLLWLRG 241
>SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034)
Length = 363
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Frame = +1
Query: 274 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSL 453
LFG+F T+ +GRK+ +SV ++ + ++ ++ F G+S+ S +
Sbjct: 160 LFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILIFFAGLSLASSIAC 219
Query: 454 GPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYV-TWQWTAFVCSVITFIDLLIV 630
LI E P +R L L + V ++ W+ + + LL
Sbjct: 220 QYTLIIEMIGPDHRTIAGIINELFWKAGWLLIILVAYFIRDWRTFMLIGAAPGLAILLFW 279
Query: 631 INSPESPSWLADQGKYEDCRKVFIWLRGDTENEELEK 741
ESP WL +G+ ++ ++ + G ++ + L+K
Sbjct: 280 KWIFESPRWLLTKGRLDEAHEILVNFGGKSKEQPLDK 316
>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 493
Score = 44.0 bits (99), Expect = 1e-04
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Frame = +1
Query: 316 GRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGEYTSPKYR 495
GRK ++ G +++ A + +L R + G+ +G ++ PI + E R
Sbjct: 115 GRKPVLVLCSGVFTAGAVVMGVAGTKHVLLVGRLVIGLGIGGASMTVPIYVAEAAPSSMR 174
Query: 496 GAFLSSLCLVMA---MATLTVHSVGSYVT---WQWTAFVCSVITFIDLLIVINSPESPSW 657
G ++ L + V + +Y W++ + +V + I + PESP W
Sbjct: 175 GKLVTLNNLFITGGQFIASVVDGIFAYDRQNGWRFMLGLAAVPSIIMFFGCVILPESPRW 234
Query: 658 LADQGKYEDCRKVFIWLRGDTE-NEELE 738
L + KY + R +RG T+ + ELE
Sbjct: 235 LISKCKYAEARAALCKIRGRTDVDRELE 262
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 39.9 bits (89), Expect = 0.002
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 4/164 (2%)
Frame = +1
Query: 217 MLIDESTESWIA-AIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNT 393
++ + S+ SW +I LFGN + KYGR+ IS +V W+ S+
Sbjct: 85 LVCEYSSLSWATNSIMFTGWLFGNIVFGILSDKYGRRKVLFIS--SCMVCWVAFASSFVP 142
Query: 394 YFILAA--RFLQGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSY 567
Y+ L A RF G +G S + I+ E+ P+ R + A + + + +
Sbjct: 143 YYWLYAVFRFFIGFGLGGSIVILFIMATEFVGPQKRAMAGTFTWYFWTGALMLIALLAYF 202
Query: 568 V-TWQWTAFVCSVITFIDLLIVINSPESPSWLADQGKYEDCRKV 696
+ W+ + S + L PES WL + ++ +
Sbjct: 203 IRDWRILSITTSAPGILLFLFWWLIPESVRWLLTHERSKEAEMI 246
>SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11)
Length = 302
Score = 39.5 bits (88), Expect = 0.003
Identities = 32/157 (20%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Frame = +1
Query: 274 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSL 453
LFG+ T+ +GRK++ +SV ++ + ++ ++ F G+S+ S +
Sbjct: 66 LFGSLLSGTLSDAFGRKISLTVSVALQAAAFIGASFVTSHTALIILIFFAGLSIASSIAC 125
Query: 454 GPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYV-TWQWTAFVCSVITFIDLLIV 630
LI E P +R L L + V ++ W+ + + LL
Sbjct: 126 QYTLIIEMIGPDHRTIAGIINELFWKAGWLLIILVAYFIRDWRTFMLIGAAPGLAILLFW 185
Query: 631 INSPESPSWLADQGKYEDCRKVFIWLRGDTENEELEK 741
ESP WL +G+ ++ ++ + +++ + L+K
Sbjct: 186 KWIFESPRWLITKGRLDEAHEILVNFGSNSKEQSLDK 222
>SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)
Length = 201
Score = 36.3 bits (80), Expect = 0.027
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 274 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITS---ASNTYFILAARFLQGISMGMS 444
+ G P ++GRK + + + IVG LL+ A + + RF+ GI+ GM+
Sbjct: 1 MIGALAGPLFANRFGRKRSLLANNGLAIVGALLMFLSYFAKTSPLLTVGRFVIGINCGMN 60
Query: 445 TSLGPILIGEYTSPKYRGA 501
T++ PI + E RG+
Sbjct: 61 TAIAPIYLSELAPIHLRGS 79
>SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 34.7 bits (76), Expect = 0.081
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 10/179 (5%)
Frame = +1
Query: 52 LFFVFSFHNKMVRWITPFVKQCFVTSGVAISMAQFGLVFGITAILIPQLQSQKPVMLIDE 231
+FFV MVRW F+ + + V ++ + IT + + + V + +
Sbjct: 81 IFFVTYLPYTMVRWFEAFMNSSQIAAAVFMNSPKIAAAVSITEVFMNSTKIAAAVNITEV 140
Query: 232 STES-WIAAIPGFALLFGNFT-IPTIMGKYGRKVANIISVLPVIVGWLLITSA---SNTY 396
S IAA +F N T I + K+A +S+ V + I +A S T
Sbjct: 141 FMNSNKIAAAVSITEVFMNCTKIAAAVFMNSPKIAAAVSITEVFMNCTKIATACLSSTTA 200
Query: 397 FILAARFL-----QGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSV 558
F +A +L QG+ + + G+ S Y + ++ A+AT + +V
Sbjct: 201 FGVACNYLARYEEQGVGAQWNNLYASPIAGDEFSLGYAMGMMMIDGVLYALATFYIEAV 259
>SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15)
Length = 839
Score = 33.9 bits (74), Expect = 0.14
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Frame = +1
Query: 271 LLFGNFTIPTIMGKYGRKVANIISV-LPVIVGWLLITSASNTYFILAARFLQGISMGMST 447
LL G+ + ++GR++ IS+ L + G S + FIL RF+ G++
Sbjct: 129 LLVGSLVFSAVSDRFGRRIGVFISIALLAVCGTTSGFSNCLSLFILL-RFVTGMANAGCL 187
Query: 448 SLGPILIGEYTSPKYRGA--FLSSLCLVMA--MATLTVHSVGSYVTWQWTAFVCSVITFI 615
+ + E S +R A FL+++ + + M +L + + Y Q+ S+
Sbjct: 188 LVRYVFCMELISINHRTAVGFLTNIFVSLGFDMLSLLAYLIRDY---QYLLLAVSLPAAP 244
Query: 616 DLLIVINSPESPSWLADQGKYEDCRKVFI 702
+L PE+P WL Q + ++ K+ +
Sbjct: 245 LVLFWGVIPETPRWLIAQNRLDEAHKLLM 273
>SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042)
Length = 277
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 274 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSL 453
LFG+F T+ +GRK+ +SV ++ + ++ ++ F G+S+ S +
Sbjct: 157 LFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILLFFAGLSLASSIAC 216
Query: 454 GPILIGEYTSPKYR 495
LI E P +R
Sbjct: 217 QYTLIIEMIGPDHR 230
>SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015)
Length = 292
Score = 33.5 bits (73), Expect = 0.19
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Frame = +1
Query: 271 LLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAA-RFLQGISMGMST 447
LL G+ T +I +GR+++ +S+ ++ +++ S+ + A RF G +
Sbjct: 10 LLVGSVTFSSISDHFGRRLSMFLSIF-LMAACGIVSGVSDCLSMFALFRFGAGAACAGCL 68
Query: 448 SLGPILIGEYTSPKYRGA--FLSSLCLVMAMATLTVHSVGSYVTWQWTAFVCSVITFIDL 621
+ E K+R A F+S++ + + +++T+ V W++ S L
Sbjct: 69 LARYVYCVELVVRKHRTAAGFISNMFVSVGFSSVTLF-VYFIHEWRYQLVAVSATGLPLL 127
Query: 622 LIVINSPESPSWLADQGKYED 684
+ PESP WL + K ++
Sbjct: 128 IFWWFIPESPRWLIAENKLDE 148
>SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05)
Length = 457
Score = 32.7 bits (71), Expect = 0.33
Identities = 36/154 (23%), Positives = 52/154 (33%), Gaps = 1/154 (0%)
Frame = +1
Query: 271 LLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTS 450
+L G+ I +GRK IS + V + F RF+ G +
Sbjct: 87 MLIGSLVCGVISDAWGRKKCLFISYTLLGVAGVGSACVDCVSFFAFLRFVVGFGLTGVML 146
Query: 451 LGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYV-TWQWTAFVCSVITFIDLLI 627
+ + E PK R L A + + + W+ V +V F LL
Sbjct: 147 SEYVYLAEMVGPKRRTLIAVLFALFGGAADIFFVLIAYLIRAWRTLLLVYTVPAFAVLLC 206
Query: 628 VINSPESPSWLADQGKYEDCRKVFIWLRGDTENE 729
PESP WL G Y D I G + +
Sbjct: 207 WRWIPESPRWLLAHG-YVDTAYAVIMKYGPKKGQ 239
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 574 WQWTAFVCSVITFIDLLIVINSPESPSWLADQGKYEDCRKVFI 702
W+W + + + + L+ PE+P WL G+ E+ R V I
Sbjct: 800 WRWYMRISGLPSILFLVFWRLLPETPRWLIAHGRLEEARDVLI 842
>SB_31847| Best HMM Match : Sugar_tr (HMM E-Value=4.6e-05)
Length = 549
Score = 31.1 bits (67), Expect = 1.00
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +1
Query: 379 SASNTYFILA-ARFLQGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHS 555
S +N Y +L F+ G + +S L S R + S+ + L +H+
Sbjct: 107 SFANGYILLGFLEFMVGFFL-VSALLSEFTYVIELSATKRRTMIGSVVEIFWPVCLLLHT 165
Query: 556 VGSYVTWQWTAFVCSVIT--FIDLLIVINSPESPSWLADQGKYEDCRKV 696
+ +++ +W + +V F+ + PESP WL +G+ ++ + V
Sbjct: 166 LIAFLVHEWRNLLLAVSIPGFVFVCFWRYIPESPRWLVTRGRLDEAQAV 214
>SB_20394| Best HMM Match : SbmA_BacA (HMM E-Value=6.2)
Length = 215
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 574 WQWTAFVCSVITFIDLLIVINSPESPSWLADQGKYEDCRKVFI 702
W+ VCS F+ + + PES +L +G+ ED KV I
Sbjct: 114 WRTMIRVCSTPIFLLFIFIRVFPESSRFLVTKGRIEDALKVLI 156
>SB_14846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 574 WQWTAFVCSVITFIDLLIVINSPESPSWLADQGKYEDCRKVFI 702
W+ VCS F+ + + PES +L +G+ ED KV I
Sbjct: 55 WRTMIRVCSTPIFLLFIFIRVFPESSRFLVTKGRIEDALKVLI 97
>SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012)
Length = 466
Score = 29.9 bits (64), Expect = 2.3
Identities = 34/157 (21%), Positives = 55/157 (35%), Gaps = 4/157 (2%)
Frame = +1
Query: 271 LLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTS 450
+LFG+F + +GRK + ++ + F RFL G + +
Sbjct: 121 MLFGSFLTGMVSDAWGRKNCLFLFTGIMLAAGVASALVDCVSFFAFLRFLVGFGLSGAML 180
Query: 451 LGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYVTWQWTAFVCSVITFIDLLIV 630
I + E PK R L L + ++ T + + I L
Sbjct: 181 SQFIYLTEIVGPKRRTLTGYVAYLFWGGFGLVILLFAYFIRGWRTLLLAGTLPAIILFPF 240
Query: 631 IN-SPESPSWLADQGKYEDCRKVFIWL---RGDTENE 729
PESP WL G ++ V + RG+T +E
Sbjct: 241 WRWIPESPRWLVANGGLDEAHAVLVKFGAKRGNTIDE 277
>SB_51293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +1
Query: 385 SNTYFILAA-RFLQGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVG 561
+NT + A RF G++ + + E T+ R A + L + + LT+ +
Sbjct: 10 ANTLTLFAVMRFFCGMATAGCLLVRFVYSMEITNLANRTAMGIMMNLFIVLGALTLTLIA 69
Query: 562 SYVT-WQWTAFVCSVITFIDLLIVINSPESPSWLADQGKYEDCRKVF 699
V +++ C + LL+ PE+P WL +GK + ++VF
Sbjct: 70 YLVRDFRYLMLSCVLPGIPPLLLWKWIPETPPWLIAKGKLPEAQRVF 116
>SB_34212| Best HMM Match : EGF (HMM E-Value=1.1e-05)
Length = 178
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 447 CAHSHRDPLKKSCSQDEVCVGGAC 376
CA + RDPL+ +C +D+ C G C
Sbjct: 88 CARASRDPLQSAC-EDKPCKNGTC 110
>SB_42090| Best HMM Match : Ldl_recept_a (HMM E-Value=0.54)
Length = 282
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +3
Query: 57 FCFFIS*QNGEMDHAICEAVLRNIRCGYQHGAVRSRLWYHRDPDTAAAVTKTCNADRRIH 236
F FFIS N C++ IRC ++ LW R PD + +T C I
Sbjct: 23 FDFFISGNNIRRARYNCKSF--GIRCN----SINRHLWRDRKPDCVSNITTECGC--VIV 74
Query: 237 RVLDSCY 257
+D CY
Sbjct: 75 TTMDGCY 81
>SB_2808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 255 YTWFRAVIW*LHYTYHHGQIWTKSRQHHQCSAR-NRRLAVNHKRLQH 392
+ W+R V L ++Y +G++W+ R+ C A L + H R+ H
Sbjct: 9 HQWYRPVS--LKWSYANGKVWSSDRKKVACKANIYDALTLAHTRIAH 53
>SB_37206| Best HMM Match : MFS_1 (HMM E-Value=3.4e-17)
Length = 1088
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +1
Query: 160 LVFGITAILI-PQLQSQKPVMLIDESTESWIAAIPGFALLFGNFTIPTIMGKYGRKVANI 336
L FG+ A +I P L V ++ WI + LFG+ + +Y + +
Sbjct: 612 LTFGMAAAVIGPTLLELGCVTSRPVNSMGWIFFSQALSALFGSSISGIMADRYDCNIILV 671
Query: 337 ISVLPVIVGWLLITSASNTYFILAARFLQGISMG-MSTSLGPILI 468
+ V V + +I S +L+ G++MG + T +LI
Sbjct: 672 VCVACVAISLTVIPLCSQFQLMLSVFAFLGVNMGIIDTVANSVLI 716
>SB_20421| Best HMM Match : Xlink (HMM E-Value=1.5e-18)
Length = 154
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2
Query: 200 CSCGIRIAVIPKTRPNCAMLIATPDVTKHCFTNGVIHLTILL*NEKTK 57
C+CG+ I V+P NCA+ PD+ G + L EK++
Sbjct: 25 CNCGLEIRVVPFLNANCAV---DPDLVGDYKGKGTYNKVFYLSGEKSR 69
>SB_11833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 274 LFGNFTIPTIMGKYGRKVANIISVL-PVIVGWLLITSASNTYFILAA-RFLQGISMGMST 447
+FG I K+GRK+ V+ + G L ++ +N Y++ A R L G +G +
Sbjct: 265 IFGAMAGSIISDKFGRKIVVFPCVIFASLCG--LASAFANKYWVFALFRALLGAGIGGYS 322
Query: 448 SLGPILIGEYTSPKYR 495
G +L+ EY ++R
Sbjct: 323 ICGFVLVMEYIGIRHR 338
>SB_59015| Best HMM Match : Arif-1 (HMM E-Value=0.62)
Length = 526
Score = 28.7 bits (61), Expect = 5.3
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +3
Query: 135 GYQHGAVRSRLWYHRDPDTAAAVTKTCNADRRIHRVLDSC---YTWFRAVIW*LHYTY-- 299
G HGA+R+ + D A+ RR+ V+ +C + W+R V+ L +
Sbjct: 188 GVCHGAIRTLGAHGPDDKMCNAMPLLTKTKRRLRTVVFNCRSLWCWYRLVLPILAVSRLG 247
Query: 300 HHGQIWTKSRQHHQCSARNRRLAVNHKRLQHILHLGCKISSR 425
HG + + HH+ + + + R H L +SR
Sbjct: 248 QHGHVRLYNTIHHRPTGNAAQTMICASRNSHTLSRNDHSTSR 289
>SB_40134| Best HMM Match : Calx-beta (HMM E-Value=0)
Length = 517
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -2
Query: 629 TINKSMKVITEHTKAVHCHVTYEPTECTVKVAIAITKQ-RLDKNAPRYFGLVYSPIKIGP 453
T N + +T++TK + VT+ E T V ++IT ++++N Y L S +
Sbjct: 219 TSNDTASPLTDYTKINNLEVTFLSNETTKTVNVSITDDVKVEENETFYAHLTTSLSSVNI 278
Query: 452 NDVLIPIEI 426
D + I I
Sbjct: 279 TDNRVSITI 287
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 290 VKLPNNSAKPGIAAIQDSVDSSI 222
+KLP KPGI IQD +D S+
Sbjct: 779 IKLPMARPKPGICPIQDYIDPSL 801
>SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06)
Length = 624
Score = 28.3 bits (60), Expect = 7.0
Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 3/135 (2%)
Frame = +1
Query: 301 IMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGEYT 480
I +GR++ +S +++ + + A + RF G S+ I + E
Sbjct: 77 ISDAFGRRLCMFLSCGILVISGVAASFADCLSLLGLLRFCIGFSLASFMLSSYIYMIELI 136
Query: 481 SPKYR--GAFLSSLCLVMAMATLTVHSVGSYVT-WQWTAFVCSVITFIDLLIVINSPESP 651
P+YR G +S + + +G +V W++ C ++ L PES
Sbjct: 137 GPQYRTMGGQISHVFYSPGYCLTAL--IGYFVRDWRYLNMTCCLLPAFFFLTWKVFPESA 194
Query: 652 SWLADQGKYEDCRKV 696
WL + ++ +V
Sbjct: 195 RWLIANNRLDEALQV 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,138,056
Number of Sequences: 59808
Number of extensions: 524543
Number of successful extensions: 1643
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1627
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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