Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30319
         (362 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   1.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   2.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   5.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   5.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   5.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   5.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   5.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   5.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   5.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   9.0  

>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 202 GGTRATLTIFYFYLLGE*FNYV 137
           GGT  T T++YF + G  F+Y+
Sbjct: 330 GGT-ITRTMWYFQICGSAFSYL 350


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 267 ASRTDMPHTISFFHP 223
           ASR  +P   +FFHP
Sbjct: 45  ASRLSLPTNPAFFHP 59


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 90  LTLSIVTTAAPPFKPKRITASR 25
           LT  +  + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 90  LTLSIVTTAAPPFKPKRITASR 25
           LT  +  + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 90  LTLSIVTTAAPPFKPKRITASR 25
           LT  +  + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 90  LTLSIVTTAAPPFKPKRITASR 25
           LT  +  + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 90  LTLSIVTTAAPPFKPKRITASR 25
           LT  +  + +PP KP   TAS+
Sbjct: 99  LTSPLSVSTSPPGKPATSTASQ 120


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 90  LTLSIVTTAAPPFKPKRITASR 25
           LT  +  + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 90  LTLSIVTTAAPPFKPKRITASR 25
           LT  +  + +PP KP   TAS+
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = +3

Query: 252 CQCEKHTSEKWYEC 293
           C+CE      W EC
Sbjct: 876 CKCENGKPTCWREC 889


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,229
Number of Sequences: 336
Number of extensions: 1343
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)