BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30315
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43090-1|AAC47303.1| 1505|Drosophila melanogaster similar protein. 29 5.1
BT016132-1|AAV37017.1| 776|Drosophila melanogaster GH16921p pro... 29 5.1
AE014297-4537|AAF57008.2| 1507|Drosophila melanogaster CG7951-PA... 29 5.1
BT021340-1|AAX33488.1| 835|Drosophila melanogaster LP23904p pro... 29 8.9
AY129445-1|AAM76187.1| 855|Drosophila melanogaster LD18893p pro... 29 8.9
AE014296-2189|AAF49878.1| 835|Drosophila melanogaster CG10967-P... 29 8.9
>U43090-1|AAC47303.1| 1505|Drosophila melanogaster similar protein.
Length = 1505
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 464 SNHKYRSPSSSNPSLATKSSASELTHRYSPLS 559
S Y+SPSSS+ S + +S+S ++ SPLS
Sbjct: 712 SGQHYQSPSSSSTSAPSNTSSSNNSYANSPLS 743
>BT016132-1|AAV37017.1| 776|Drosophila melanogaster GH16921p
protein.
Length = 776
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 464 SNHKYRSPSSSNPSLATKSSASELTHRYSPLS 559
S Y+SPSSS+ S + +S+S ++ SPLS
Sbjct: 712 SGQHYQSPSSSSTSAPSNTSSSNNSYANSPLS 743
>AE014297-4537|AAF57008.2| 1507|Drosophila melanogaster CG7951-PA
protein.
Length = 1507
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 464 SNHKYRSPSSSNPSLATKSSASELTHRYSPLS 559
S Y+SPSSS+ S + +S+S ++ SPLS
Sbjct: 712 SGQHYQSPSSSSTSAPSNTSSSNNSYANSPLS 743
>BT021340-1|AAX33488.1| 835|Drosophila melanogaster LP23904p
protein.
Length = 835
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 705 AISASPLTCR*AHGAQTGSVADTSPSKSRALQNLSPDRKHDPPRRSG 565
AI P R A G GS+++T P + + +SP P RRSG
Sbjct: 482 AIGTPPTRMRSASG---GSLSETPPPHAPSTWQVSPGHSQSPLRRSG 525
>AY129445-1|AAM76187.1| 855|Drosophila melanogaster LD18893p
protein.
Length = 855
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 705 AISASPLTCR*AHGAQTGSVADTSPSKSRALQNLSPDRKHDPPRRSG 565
AI P R A G GS+++T P + + +SP P RRSG
Sbjct: 502 AIGTPPTRMRSASG---GSLSETPPPHAPSTWQVSPGHSQSPLRRSG 545
>AE014296-2189|AAF49878.1| 835|Drosophila melanogaster CG10967-PA
protein.
Length = 835
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 705 AISASPLTCR*AHGAQTGSVADTSPSKSRALQNLSPDRKHDPPRRSG 565
AI P R A G GS+++T P + + +SP P RRSG
Sbjct: 482 AIGTPPTRMRSASG---GSLSETPPPHAPSTWQVSPGHSQSPLRRSG 525
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,362,624
Number of Sequences: 53049
Number of extensions: 642984
Number of successful extensions: 1505
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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