Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30313
         (547 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43318-1|AAC50385.1|  585|Homo sapiens transmembrane receptor pr...    29   8.0  

>U43318-1|AAC50385.1|  585|Homo sapiens transmembrane receptor
           protein.
          Length = 585

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
 Frame = +2

Query: 182 FWLG--TVLHGIYADNFWHFVLPEXDNFWHSQTPIIFLGA-RLPLHIILLYPAXIYHAXY 352
           FW+G  +VL  I         L + D F + + PIIFL A  L + +  L    + HA  
Sbjct: 237 FWIGLWSVLCFISTSTTVATFLIDMDTFRYPERPIIFLSACYLCVSLGFLVRLVVGHASV 296

Query: 353 AVSKLNLPRYAEPFAVGLXTVLIDIPYDIXAVKFVHW 463
           A S+ +   + E     L T++  + Y       + W
Sbjct: 297 ACSREHNHIHYETTGPALCTIVFLLVYFFGMASSIWW 333


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,769,369
Number of Sequences: 237096
Number of extensions: 1532255
Number of successful extensions: 3031
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3031
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)