Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30312
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 272 2e-73
Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical pr... 104 6e-23
Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical p... 104 6e-23
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z75714-7|CAB00064.2| 270|Caenorhabditis elegans Hypothetical pr... 28 8.1
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 272 bits (667), Expect = 2e-73
Identities = 129/189 (68%), Positives = 152/189 (80%), Gaps = 4/189 (2%)
Frame = +3
Query: 117 PNVTKMNADQKRLILARLTRSTGFENFLAKKWSSEKRFGLEGCEILIPAMKQVIDVSTKL 296
P VT+++ DQK+++ RL RST FE FLAKKW SEKRFGLEGCE+LIPAMKQVID S+ L
Sbjct: 246 PRVTELSHDQKKVLFKRLIRSTKFEEFLAKKWPSEKRFGLEGCEVLIPAMKQVIDSSSTL 305
Query: 297 GVESIIMGMPHRGRLNVLANVCRKPLHQLFTQFAGLEAEDDGSGDVKYHLGTYIERLNRV 476
GV+S ++GMPHRGRLNVLANVCR+PL + +QF+ LE D+GSGDVKYHLG IERLNR
Sbjct: 306 GVDSFVIGMPHRGRLNVLANVCRQPLATILSQFSTLEPADEGSGDVKYHLGVCIERLNRQ 365
Query: 477 TNKNIRLAVCANPSHLEAVDPVVXGKTRAEQFYRGDNEGKKVMSILLHGDAAFAGQGVVF 656
+ KN+++AV ANPSHLEAVDPVV GK RAE FY GD + + M+ILLHGDAAFAGQGVV
Sbjct: 366 SQKNVKIAVVANPSHLEAVDPVVMGKVRAEAFYAGDEKCDRTMAILLHGDAAFAGQGVVL 425
Query: 657 R----DDAP 671
DD P
Sbjct: 426 ETFNLDDLP 434
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +1
Query: 658 ETMHLSDLPAYTTHGTIHXVANNQIGFTTRP 750
ET +L DLP+YTTHG IH V NNQIGFTT P
Sbjct: 426 ETFNLDDLPSYTTHGAIHIVVNNQIGFTTDP 456
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
Frame = +2
Query: 2 LREILNRLEQAYCNNIGIEFMFINSLEQCNWIRQRMVA---TERNKDER 139
LREIL RL+ YC + G+E+M +N+LEQ +WIR+R A TE + D++
Sbjct: 208 LREILQRLKDIYCTSTGVEYMHLNNLEQQDWIRRRFEAPRVTELSHDQK 256
>Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 104 bits (250), Expect = 6e-23
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 13/180 (7%)
Frame = +3
Query: 168 LTRSTGFENFLAKKWSSEKRFGLEGCEILIPAMKQVIDVSTKLGVESIIMGMPHRGRLNV 347
+ + F+ FL+ K+ + KR+G EG E + ++ + + + VE II+G+ HRGRLN+
Sbjct: 160 MLKCENFDKFLSTKFPTLKRYGAEGAESMFAFFSELFEGAAEKQVEEIIIGIAHRGRLNL 219
Query: 348 LANVCRKPLHQLFTQFAG---LEAEDDGSGDVKYHLGTYIERLNRVTNKNIRLAVCANPS 518
L + P +F + G D +GDV HL + + + + N+ + + NPS
Sbjct: 220 LTQLMDFPPVHMFRKIKGRAEFPESADAAGDVLSHLVSSFD--YKGSEGNVHVTMLPNPS 277
Query: 519 HLEAVDPVVXGKTRAE--QFYRGD--------NEGKKVMSILLHGDAAFAGQGVVFRDDA 668
HLEAV+PV GK RA +GD G V+++L+HGD AF GQGVV+ A
Sbjct: 278 HLEAVNPVAMGKARARAWSMNKGDYSPDERSARAGDSVLNVLVHGDGAFTGQGVVWESIA 337
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 2 LREILNRLEQAYCNNIGIEFMFINSLEQCNWIRQRM---VATERNKDE 136
L ++ +L YC IEFM IN+ E+ WI Q +A E K+E
Sbjct: 105 LHDLAEQLRHIYCGPTAIEFMHINNWEERQWISQNFENCIAEELRKEE 152
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 655 FETMHLSDLPAYTTHGTIHXVANNQIGFT 741
+E++ LS P + GT+H V NNQI FT
Sbjct: 333 WESIALSQAPHFRLGGTVHLVTNNQIAFT 361
>Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 104 bits (250), Expect = 6e-23
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 13/180 (7%)
Frame = +3
Query: 168 LTRSTGFENFLAKKWSSEKRFGLEGCEILIPAMKQVIDVSTKLGVESIIMGMPHRGRLNV 347
+ + F+ FL+ K+ + KR+G EG E + ++ + + + VE II+G+ HRGRLN+
Sbjct: 160 MLKCENFDKFLSTKFPTLKRYGAEGAESMFAFFSELFEGAAEKQVEEIIIGIAHRGRLNL 219
Query: 348 LANVCRKPLHQLFTQFAG---LEAEDDGSGDVKYHLGTYIERLNRVTNKNIRLAVCANPS 518
L + P +F + G D +GDV HL + + + + N+ + + NPS
Sbjct: 220 LTQLMDFPPVHMFRKIKGRAEFPESADAAGDVLSHLVSSFD--YKGSEGNVHVTMLPNPS 277
Query: 519 HLEAVDPVVXGKTRAE--QFYRGD--------NEGKKVMSILLHGDAAFAGQGVVFRDDA 668
HLEAV+PV GK RA +GD G V+++L+HGD AF GQGVV+ A
Sbjct: 278 HLEAVNPVAMGKARARAWSMNKGDYSPDERSARAGDSVLNVLVHGDGAFTGQGVVWESIA 337
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +2
Query: 2 LREILNRLEQAYCNNIGIEFMFINSLEQCNWIRQRM---VATERNKDE 136
L ++ +L YC IEFM IN+ E+ WI Q +A E K+E
Sbjct: 105 LHDLAEQLRHIYCGPTAIEFMHINNWEERQWISQNFENCIAEELRKEE 152
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 655 FETMHLSDLPAYTTHGTIHXVANNQIGFT 741
+E++ LS P + GT+H V NNQI FT
Sbjct: 333 WESIALSQAPHFRLGGTVHLVTNNQIAFT 361
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 413 LSFETGELCEQLVQRLTAHVREYVEAPSMGHAHNDGFDSEF 291
+S +TG CE+ LTA +RE + A SM H+ + EF
Sbjct: 149 VSAKTGINCEEAFHTLTAAMRERITAGSM-HSDESDDNEEF 188
>Z75714-7|CAB00064.2| 270|Caenorhabditis elegans Hypothetical
protein ZC434.4 protein.
Length = 270
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3
Query: 459 ERLNRVTNKNIRLAVCANPSHLEAVDPVVXGKTRAEQFYRGDNEGKKVMSILLHGDAAFA 638
+R+ +V + + +P L + + GK AE+ + K SI++ AF
Sbjct: 7 KRVKKVAKRKSEKVIHLDPDALRYLRFRIGGKYMAERHMFLKKDPSKENSIIVSNIPAFV 66
Query: 639 GQGVV 653
G+GVV
Sbjct: 67 GEGVV 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,502,721
Number of Sequences: 27780
Number of extensions: 371926
Number of successful extensions: 1189
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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