Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30309
         (761 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    38   0.015
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    38   0.015
M17214-2|AAA28508.1|  858|Drosophila melanogaster protein ( D.me...    36   0.046
AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    31   1.7  

>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 37.9 bits (84), Expect = 0.015
 Identities = 19/58 (32%), Positives = 32/58 (55%)
 Frame = +2

Query: 311 LNSLQLIQSRFCRIAVGAPWCVRDVDLHDDLN*PSLEFLAESTTGSETRPTEKIQRET 484
           ++ +Q  QSR  RI  GAPW +R+ ++H DL    ++ + E     +T+  EK+   T
Sbjct: 809 IDIIQRAQSRILRIITGAPWYLRNENIHRDL---KIKLVIEVIAEKKTKYNEKLTTHT 863


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 37.9 bits (84), Expect = 0.015
 Identities = 19/58 (32%), Positives = 32/58 (55%)
 Frame = +2

Query: 311 LNSLQLIQSRFCRIAVGAPWCVRDVDLHDDLN*PSLEFLAESTTGSETRPTEKIQRET 484
           ++ +Q  QSR  RI  GAPW +R+ ++H DL    ++ + E     +T+  EK+   T
Sbjct: 809 IDIIQRAQSRILRIITGAPWYLRNENIHRDL---KIKLVIEVIAEKKTKYNEKLTTHT 863


>M17214-2|AAA28508.1|  858|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 858

 Score = 36.3 bits (80), Expect = 0.046
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +2

Query: 299 NNKILNSLQLIQSRFCRIAVGAPWCVRDVDLHDDLN*PSL 418
           +N  ++ +Q  QS+  R   GAPW VR  ++  DLN PS+
Sbjct: 807 SNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSV 846


>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown
           protein.
          Length = 908

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 311 LNSLQLIQSRFCRIAVGAPWCVRDVDLHDDL 403
           +  +Q IQ++  R+  G  W VR+  LH DL
Sbjct: 818 IKRIQAIQNKVARLITGCEWFVRNTTLHRDL 848


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,390,054
Number of Sequences: 53049
Number of extensions: 628224
Number of successful extensions: 1045
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)