Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30309
         (761 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.4  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   7.1  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    22   7.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.4  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 322 ERVEYFVVLKPFLNYSLIPLIIT 254
           +R+ YF+    ++N +L PLI T
Sbjct: 360 DRMVYFITWLGYVNSALNPLIYT 382


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 322 ERVEYFVVLKPFLNYSLIPLIIT 254
           +R+ YF+    ++N +L PLI T
Sbjct: 360 DRMVYFITWLGYVNSALNPLIYT 382


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 322 ERVEYFVVLKPFLNYSLIPLIIT 254
           +R+ YF+    ++N +L PLI T
Sbjct: 360 DRMVYFITWLGYVNSALNPLIYT 382


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 233 CGPTLFGHGLPNTSKLNLFNSVVMMVPL 150
           CG   F  GL + S L  +   V  VPL
Sbjct: 202 CGTDYFNRGLLSASYLVCYGIWVYFVPL 229


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 233 CGPTLFGHGLPNTSKLNLFNSVVMMVPL 150
           CG   F  GL + S L  +   V  VPL
Sbjct: 78  CGTDYFNRGLLSASYLVCYGIWVYFVPL 105


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 291  GLRT-TKYSTLSSSYNLVSAG*PSE 362
            GLR  TKY+ +  +YN V +G  SE
Sbjct: 1076 GLRPYTKYTLVVQAYNQVGSGPLSE 1100


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 291  GLRT-TKYSTLSSSYNLVSAG*PSE 362
            GLR  TKY+ +  +YN V +G  SE
Sbjct: 1072 GLRPYTKYTLVVQAYNQVGSGPLSE 1096


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 428 AESTTGSETRPTEKIQRETQ 487
           A  TTG+ T PT ++++  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,146
Number of Sequences: 438
Number of extensions: 4243
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)