Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30307
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.82 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.82 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   3.3  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -3

Query: 560 KILFQICHSTLK**LRLHLQFMLVLQVLFHLLWYL 456
           +ILF I ++TL+  + LHL  ML  Q ++ +++ +
Sbjct: 228 QILFLITYATLQILVYLHLAVMLGFQDIYMIVYII 262


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -3

Query: 560 KILFQICHSTLK**LRLHLQFMLVLQVLFHLLWYL 456
           +ILF I ++TL+  + LHL  ML  Q ++ +++ +
Sbjct: 228 QILFLITYATLQILVYLHLAVMLGFQDIYMIVYII 262


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 124 SRACSPPDGEWLLSLM 171
           +  CSPP G+ +LS M
Sbjct: 127 TNTCSPPQGQLVLSSM 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,160
Number of Sequences: 336
Number of extensions: 3080
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)