Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30307
         (721 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316...    28   8.6  
07_01_0828 - 6679393-6680432,6680448-6680784                           28   8.6  

>12_02_0772 -
           23029703-23029715,23029835-23030463,23030637-23031673,
           23031830-23032166
          Length = 671

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -2

Query: 663 QRLWELGLETRFWSNGKRPLIESYFER---VRQRESFKNTIPNLPQH 532
           Q L ++  E   W+  +R  +ESY E    + + E+ KN I N  Q+
Sbjct: 344 QNLGKILSEEEQWAENERLFLESYEEEINLINEMENIKNEIDNAEQY 390


>07_01_0828 - 6679393-6680432,6680448-6680784
          Length = 458

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -2

Query: 663 QRLWELGLETRFWSNGKRPLIESYFER---VRQRESFKNTIPNLPQH 532
           Q L ++  E   W+  +R  +ESY E    + + E+ KN I N  Q+
Sbjct: 391 QNLGKILSEEEQWAENERLFLESYEEEINLINEMENIKNEIDNAEQY 437


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,544,420
Number of Sequences: 37544
Number of extensions: 255426
Number of successful extensions: 619
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)