Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30307
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17849-1|CAA76892.1| 358|Homo sapiens ganglioside-induced diffe... 69 2e-11
BC024939-1|AAH24939.1| 290|Homo sapiens ganglioside-induced dif... 69 2e-11
BC009014-1|AAH09014.1| 367|Homo sapiens ganglioside-induced dif... 59 2e-08
BC000199-1|AAH00199.1| 367|Homo sapiens ganglioside-induced dif... 59 2e-08
AL117382-2|CAI23110.1| 367|Homo sapiens ganglioside-induced dif... 59 2e-08
AL117382-1|CAI23109.1| 288|Homo sapiens ganglioside-induced dif... 59 2e-08
AL035462-2|CAI23551.1| 367|Homo sapiens ganglioside-induced dif... 59 2e-08
AL035462-1|CAI23550.1| 288|Homo sapiens ganglioside-induced dif... 59 2e-08
AK056251-1|BAB71128.1| 367|Homo sapiens rotein 1. protein. 59 2e-08
AF277566-1|AAM73515.1| 367|Homo sapiens ganglioside-induced dif... 59 2e-08
AL117382-4|CAI23112.1| 123|Homo sapiens ganglioside-induced dif... 58 4e-08
AL035462-5|CAI23553.1| 123|Homo sapiens ganglioside-induced dif... 58 4e-08
AF123765-1|AAP97244.1| 368|Homo sapiens ganglioside-induced dif... 48 4e-05
AF123764-1|AAP97243.1| 347|Homo sapiens ganglioside-induced dif... 48 4e-05
X63679-1|CAA45218.1| 374|Homo sapiens TRAM protein protein. 31 3.1
CR541739-1|CAG46539.1| 374|Homo sapiens TRAM1 protein. 31 3.1
CR541654-1|CAG46455.1| 374|Homo sapiens TRAM1 protein. 31 3.1
BT007359-1|AAP36023.1| 374|Homo sapiens translocating chain-ass... 31 3.1
BC037738-1|AAH37738.1| 374|Homo sapiens translocation associate... 31 3.1
BC000687-1|AAH00687.1| 374|Homo sapiens translocation associate... 31 3.1
>Y17849-1|CAA76892.1| 358|Homo sapiens ganglioside-induced
differentiation associated protein 1 protein.
Length = 358
Score = 68.9 bits (161), Expect = 2e-11
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTI 550
WLC E+F++AD++LAV L RL LG R W NGKRP +E+Y+ERV +R++F +
Sbjct: 238 WLCGESFTLADVSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTFNKVL 293
>BC024939-1|AAH24939.1| 290|Homo sapiens ganglioside-induced
differentiation-associated protein 1 protein.
Length = 290
Score = 68.9 bits (161), Expect = 2e-11
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTI 550
WLC E+F++AD++LAV L RL LG R W NGKRP +E+Y+ERV +R++F +
Sbjct: 170 WLCGESFTLADVSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTFNKVL 225
>BC009014-1|AAH09014.1| 367|Homo sapiens ganglioside-induced
differentiation-associated protein 1-like 1 protein.
Length = 367
Score = 58.8 bits (136), Expect = 2e-08
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPNL 541
WLC F++AD+ L L RL LGL ++W +G RP ++S+FERV++R +F+ + ++
Sbjct: 260 WLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDI 318
>BC000199-1|AAH00199.1| 367|Homo sapiens ganglioside-induced
differentiation-associated protein 1-like 1 protein.
Length = 367
Score = 58.8 bits (136), Expect = 2e-08
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPNL 541
WLC F++AD+ L L RL LGL ++W +G RP ++S+FERV++R +F+ + ++
Sbjct: 260 WLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDI 318
>AL117382-2|CAI23110.1| 367|Homo sapiens ganglioside-induced
differentiation-associated protein 1-like 1 protein.
Length = 367
Score = 58.8 bits (136), Expect = 2e-08
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPNL 541
WLC F++AD+ L L RL LGL ++W +G RP ++S+FERV++R +F+ + ++
Sbjct: 260 WLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDI 318
>AL117382-1|CAI23109.1| 288|Homo sapiens ganglioside-induced
differentiation-associated protein 1-like 1 protein.
Length = 288
Score = 58.8 bits (136), Expect = 2e-08
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPNL 541
WLC F++AD+ L L RL LGL ++W +G RP ++S+FERV++R +F+ + ++
Sbjct: 202 WLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDI 260
>AL035462-2|CAI23551.1| 367|Homo sapiens ganglioside-induced
differentiation-associated protein 1-like 1 protein.
Length = 367
Score = 58.8 bits (136), Expect = 2e-08
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPNL 541
WLC F++AD+ L L RL LGL ++W +G RP ++S+FERV++R +F+ + ++
Sbjct: 260 WLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDI 318
>AL035462-1|CAI23550.1| 288|Homo sapiens ganglioside-induced
differentiation-associated protein 1-like 1 protein.
Length = 288
Score = 58.8 bits (136), Expect = 2e-08
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPNL 541
WLC F++AD+ L L RL LGL ++W +G RP ++S+FERV++R +F+ + ++
Sbjct: 202 WLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDI 260
>AK056251-1|BAB71128.1| 367|Homo sapiens rotein 1. protein.
Length = 367
Score = 58.8 bits (136), Expect = 2e-08
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPNL 541
WLC F++AD+ L L RL LGL ++W +G RP ++S+FERV++R +F+ + ++
Sbjct: 260 WLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDI 318
>AF277566-1|AAM73515.1| 367|Homo sapiens ganglioside-induced
differentiation-associated protein 1-like 1 protein.
Length = 367
Score = 58.8 bits (136), Expect = 2e-08
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPNL 541
WLC F++AD+ L L RL LGL ++W +G RP ++S+FERV++R +F+ + ++
Sbjct: 260 WLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDI 318
>AL117382-4|CAI23112.1| 123|Homo sapiens ganglioside-induced
differentiation-associated protein 1-like 1 protein.
Length = 123
Score = 57.6 bits (133), Expect = 4e-08
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFK 559
WLC F++AD+ L L RL LGL ++W +G RP ++S+FERV++R +F+
Sbjct: 42 WLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFR 94
>AL035462-5|CAI23553.1| 123|Homo sapiens ganglioside-induced
differentiation-associated protein 1-like 1 protein.
Length = 123
Score = 57.6 bits (133), Expect = 4e-08
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFK 559
WLC F++AD+ L L RL LGL ++W +G RP ++S+FERV++R +F+
Sbjct: 42 WLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFR 94
>AF123765-1|AAP97244.1| 368|Homo sapiens ganglioside-induced
differentiation associated protein 2 protein.
Length = 368
Score = 47.6 bits (108), Expect = 4e-05
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPNL 541
WLC +AD+ L L RL LG W +G RP ++S+FERV++R +F+ + ++
Sbjct: 264 WLCLH---LADVLLGATLHRLKFLGRPRNTWEDGSRPNLQSFFERVQRRFAFRKVLGDI 319
>AF123764-1|AAP97243.1| 347|Homo sapiens ganglioside-induced
differentiation associated protein 1 protein.
Length = 347
Score = 47.6 bits (108), Expect = 4e-05
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = -2
Query: 717 WLCCENFSIADINLAVLLQRLWELGLETRFWSNGKRPLIESYFERVRQRESFKNTIPNL 541
WLC +AD+ L L RL LG W +G RP ++S+FERV++R +F+ + ++
Sbjct: 243 WLCLH---LADVLLGATLHRLKFLGRPRNTWEDGSRPNLQSFFERVQRRFAFRKVLGDI 298
>X63679-1|CAA45218.1| 374|Homo sapiens TRAM protein protein.
Length = 374
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = -3
Query: 329 LNILVLKQFSALYYV--IFYISKLIFTLKSKNPKGFK---ILFMVGSGLTVPLALLT 174
LN L L Y+V +F+IS+L + K KGF +LF++G LT+ L++LT
Sbjct: 215 LNHLGLVLLVLHYFVEFLFHISRLFYFSNEKYQKGFSLWAVLFVLGRLLTLILSVLT 271
>CR541739-1|CAG46539.1| 374|Homo sapiens TRAM1 protein.
Length = 374
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = -3
Query: 329 LNILVLKQFSALYYV--IFYISKLIFTLKSKNPKGFK---ILFMVGSGLTVPLALLT 174
LN L L Y+V +F+IS+L + K KGF +LF++G LT+ L++LT
Sbjct: 215 LNHLGLVLLVLHYFVEFLFHISRLFYFSNEKYQKGFSLWAVLFVLGRLLTLILSVLT 271
>CR541654-1|CAG46455.1| 374|Homo sapiens TRAM1 protein.
Length = 374
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = -3
Query: 329 LNILVLKQFSALYYV--IFYISKLIFTLKSKNPKGFK---ILFMVGSGLTVPLALLT 174
LN L L Y+V +F+IS+L + K KGF +LF++G LT+ L++LT
Sbjct: 215 LNHLGLVLLVLHYFVEFLFHISRLFYFSNEKYQKGFSLWAVLFVLGRLLTLILSVLT 271
>BT007359-1|AAP36023.1| 374|Homo sapiens translocating
chain-associating membrane protein protein.
Length = 374
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = -3
Query: 329 LNILVLKQFSALYYV--IFYISKLIFTLKSKNPKGFK---ILFMVGSGLTVPLALLT 174
LN L L Y+V +F+IS+L + K KGF +LF++G LT+ L++LT
Sbjct: 215 LNHLGLVLLVLHYFVEFLFHISRLFYFSNEKYQKGFSLWAVLFVLGRLLTLILSVLT 271
>BC037738-1|AAH37738.1| 374|Homo sapiens translocation associated
membrane protein 1 protein.
Length = 374
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = -3
Query: 329 LNILVLKQFSALYYV--IFYISKLIFTLKSKNPKGFK---ILFMVGSGLTVPLALLT 174
LN L L Y+V +F+IS+L + K KGF +LF++G LT+ L++LT
Sbjct: 215 LNHLGLVLLVLHYFVEFLFHISRLFYFSNEKYQKGFSLWAVLFVLGRLLTLILSVLT 271
>BC000687-1|AAH00687.1| 374|Homo sapiens translocation associated
membrane protein 1 protein.
Length = 374
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = -3
Query: 329 LNILVLKQFSALYYV--IFYISKLIFTLKSKNPKGFK---ILFMVGSGLTVPLALLT 174
LN L L Y+V +F+IS+L + K KGF +LF++G LT+ L++LT
Sbjct: 215 LNHLGLVLLVLHYFVEFLFHISRLFYFSNEKYQKGFSLWAVLFVLGRLLTLILSVLT 271
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,067,995
Number of Sequences: 237096
Number of extensions: 1580269
Number of successful extensions: 3046
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3046
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -