Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30305
         (307 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   1.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   3.8  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    20   5.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   6.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   6.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    19   8.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 4   DSGKDESEDTENE 42
           D G+DE EDT+ E
Sbjct: 249 DVGEDEDEDTKKE 261


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 154  VKPLKHSPVKLVRIEITYTVLMRED 80
            V P    P K+   + T+T   +ED
Sbjct: 1299 VSPSASVPAKIASFDDTFTTTYKED 1323


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 162 ILNINHICNFY 194
           +L  N IC+FY
Sbjct: 281 VLGFNEICSFY 291


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 81  TICFSLLGLLEI 46
           T+CF +L +LEI
Sbjct: 168 TVCFMMLLMLEI 179


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 4/16 (25%), Positives = 12/16 (75%)
 Frame = +3

Query: 180 ICNFYFLIFTSYIICL 227
           +C +YF++   +++C+
Sbjct: 131 LCIYYFVVPLFFLLCI 146


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 81  TICFSLLGLLEI 46
           T+CF +L +LEI
Sbjct: 164 TVCFMMLLMLEI 175


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 162 ILNINHICNFYFLIF 206
           I+  + + NFYF+IF
Sbjct: 288 IILTSFLNNFYFIIF 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,740
Number of Sequences: 336
Number of extensions: 728
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)