Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30305
         (307 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0325 + 23135816-23135894,23136161-23136333,23136440-231366...    26   5.1  

>03_05_0325 + 23135816-23135894,23136161-23136333,23136440-23136613,
            23136881-23137004,23137090-23137190,23137337-23137423,
            23137801-23137896,23138209-23138329,23138475-23138603,
            23139458-23139549,23139660-23139771,23140189-23140541,
            23140670-23140899,23141179-23141278,23143357-23143411,
            23143548-23145496,23145587-23145745,23146514-23146685,
            23146758-23147056,23147246-23147521
          Length = 1626

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 96   TV*VISILTNFTGECFKG 149
            TV V+++L NFT  CF G
Sbjct: 1419 TVNVVALLVNFTSACFTG 1436


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,974,856
Number of Sequences: 37544
Number of extensions: 63523
Number of successful extensions: 93
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)