Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30305
         (307 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81088-9|CAB03126.1|  335|Caenorhabditis elegans Hypothetical pr...    26   6.0  
Z81088-8|CAB03130.2|  332|Caenorhabditis elegans Hypothetical pr...    25   7.9  

>Z81088-9|CAB03126.1|  335|Caenorhabditis elegans Hypothetical
           protein F53F1.9 protein.
          Length = 335

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 108 ISILTNFTGECFKGLTCNILNINHICNFYFLIF 206
           + ++  + G C +G T  IL+   +C   F IF
Sbjct: 93  VFLVITYGGRCIQGATAAILSFCRVCAVCFPIF 125


>Z81088-8|CAB03130.2|  332|Caenorhabditis elegans Hypothetical
           protein F53F1.8 protein.
          Length = 332

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 108 ISILTNFTGECFKGLTCNILNINHICNFYFLIF 206
           I  +  + G C +G T  IL+   +C   F IF
Sbjct: 97  IFFVITYGGRCIQGATAAILSFCRVCAVCFPIF 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,882,276
Number of Sequences: 27780
Number of extensions: 70953
Number of successful extensions: 165
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)