Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30304
         (678 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7F880 Cluster: Predicted protein; n=1; Sclerotinia scl...    34   2.8  
UniRef50_UPI0000E4A7D4 Cluster: PREDICTED: similar to hyalin; n=...    34   3.7  
UniRef50_UPI0000E45CE9 Cluster: PREDICTED: similar to ENSANGP000...    34   3.7  
UniRef50_Q9CD28 Cluster: Uncharacterized protein ML2537; n=17; M...    33   8.4  

>UniRef50_A7F880 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 426

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = -2

Query: 620 YKMNTLQRNRMNKLIKLIV--MAILEEVDEEISVIKKNKLWVRKWIDIR 480
           YK N+ Q N MNK+ KL+   + I EE +EE+  +K   L  + + D+R
Sbjct: 291 YKCNSRQANHMNKIKKLVEQRLKISEEREEEVEFVKGFDLHKQVFDDVR 339


>UniRef50_UPI0000E4A7D4 Cluster: PREDICTED: similar to hyalin; n=10;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           hyalin - Strongylocentrotus purpuratus
          Length = 822

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = -2

Query: 521 KKNKLWVRKWIDIRDKLGATQCLLKELALEEITK 420
           KK  +WVRKW+  R  LG    L+ EL  EE TK
Sbjct: 637 KKRSIWVRKWLQRRPNLGQYARLMNELK-EEDTK 669


>UniRef50_UPI0000E45CE9 Cluster: PREDICTED: similar to
           ENSANGP00000010363, partial; n=2; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to
           ENSANGP00000010363, partial - Strongylocentrotus
           purpuratus
          Length = 536

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = -2

Query: 521 KKNKLWVRKWIDIRDKLGATQCLLKELALEEITK 420
           KK  +WVRKW+  R  LG    L+ EL  EE TK
Sbjct: 147 KKRSIWVRKWLQRRPNLGQYARLMNELK-EEDTK 179


>UniRef50_Q9CD28 Cluster: Uncharacterized protein ML2537; n=17;
           Mycobacterium|Rep: Uncharacterized protein ML2537 -
           Mycobacterium leprae
          Length = 640

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
 Frame = -2

Query: 365 NYTIKFIAKIPI*GVPLMNSTNQQVRTCLVSE-PVSKDARWEALLARKN*TKWIDLTKLF 189
           ++ + + A +   G P   +   Q+ T ++   P  +DARW A +      +W D+ KL 
Sbjct: 147 DFHLAYAASLASTGGPGPYAEADQIVTGIIDRRPGWRDARWVAAVIHYRAGRWSDVVKLL 206

Query: 188 TNLLD--*IFGVQTHLATKLLGTRL 120
           T +++   I    TH A   LGT L
Sbjct: 207 TPIVNDPDIDEAYTHAAKIALGTAL 231


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,696,872
Number of Sequences: 1657284
Number of extensions: 9911382
Number of successful extensions: 21343
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21341
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)