Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30304
         (678 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z81509-3|CAB04156.1|  532|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z46934-1|CAA87039.1|  226|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
           protein F09C3.1 protein.
          Length = 1391

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = -2

Query: 554 LEEVDEEISVIKKNKLWVRKWIDIRDKLGAT 462
           LEE+DE+I ++ KN+L +++ I  RDK  A+
Sbjct: 713 LEEMDEKIGLLIKNRLNLQEVIAHRDKTAAS 743


>Z81509-3|CAB04156.1|  532|Caenorhabditis elegans Hypothetical
           protein F21A3.5 protein.
          Length = 532

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = -2

Query: 542 DEEISVIKKNKLWVRKWI--DIRDKLGATQCLL 450
           DE+++ +K+ KL+  KWI  + ++K GA  C L
Sbjct: 19  DEDLAGLKEQKLFNGKWIILEKKEKRGAAYCYL 51


>Z46934-1|CAA87039.1|  226|Caenorhabditis elegans Hypothetical
           protein ZK1320.1 protein.
          Length = 226

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -2

Query: 566 VMAILEEVDEEISVIKKNKLWVRKW 492
           V+ +L+E D+E+ +    ++WVR W
Sbjct: 102 VLLVLQEQDKELMLRAAREMWVRLW 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,889,831
Number of Sequences: 27780
Number of extensions: 252247
Number of successful extensions: 538
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)