Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30303
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.47 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.47 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.47 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.47 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.47 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.47 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.47 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    25   0.82 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   1.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.4  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   2.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.6  

>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +3

Query: 339 LTS-LTLTQTASG-PETSPASDNLSVPSSDT 425
           LTS L+++ +  G P TS AS NLS P+S T
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASST 173


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +3

Query: 339 LTS-LTLTQTASG-PETSPASDNLSVPSSDT 425
           LTS L+++ +  G P TS AS NLS P+S T
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASST 173


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +3

Query: 339 LTS-LTLTQTASG-PETSPASDNLSVPSSDT 425
           LTS L+++ +  G P TS AS NLS P+S T
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASST 173


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +3

Query: 339 LTS-LTLTQTASG-PETSPASDNLSVPSSDT 425
           LTS L+++ +  G P TS AS NLS P+S T
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASST 173


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +3

Query: 339 LTS-LTLTQTASG-PETSPASDNLSVPSSDT 425
           LTS L+++ +  G P TS AS NLS P+S T
Sbjct: 99  LTSPLSVSTSPPGKPATSTASQNLSSPASST 129


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +3

Query: 339 LTS-LTLTQTASG-PETSPASDNLSVPSSDT 425
           LTS L+++ +  G P TS AS NLS P+S T
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASST 173


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +3

Query: 339 LTS-LTLTQTASG-PETSPASDNLSVPSSDT 425
           LTS L+++ +  G P TS AS NLS P+S T
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQNLSSPASST 173


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 264 HQRWPKPPELSPIYLPVSPVMPVQPLTSLTL 356
           HQ+ PKP   +PIY PVS  +  + L +  L
Sbjct: 34  HQKCPKP---APIYSPVSKPVSFESLPNRRL 61


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +3

Query: 339 LTS-LTLTQTASG-PETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVVP 512
           LTS L+++ +  G P TS  S NLS P+S T   +      ++     S   S+ P + P
Sbjct: 143 LTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNPPQIYP 202


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 285 PELSPIYLPVSPVMPVQPLTSLTLTQTAS 371
           P LSP+ + + P +P     +L   QTA+
Sbjct: 116 PTLSPVGVALPPTLPAAAAAALLPPQTAA 144


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +3

Query: 264 HQRWPKPPELSPIYLPVSPVMPV 332
           H   P PP   PIY P     PV
Sbjct: 24  HSPEPYPPRCPPIYEPSCQYSPV 46


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 228 RTWPARATMQV 260
           RTWPAR   QV
Sbjct: 280 RTWPARPVNQV 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,122
Number of Sequences: 336
Number of extensions: 3363
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)