Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30303
(723 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 35 0.34
AK223042-1|BAD96762.1| 433|Homo sapiens eukaryotic translation ... 34 0.59
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 33 0.78
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 33 1.0
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 33 1.0
BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for IM... 33 1.0
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1... 32 1.8
Z34282-1|CAA84036.1| 98|Homo sapiens mucin protein. 31 3.2
Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein. 31 3.2
BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type c... 31 4.2
AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens ... 31 4.2
U31659-1|AAA84390.1| 677|Homo sapiens TAFII80 protein. 31 5.5
L25444-1|AAA63643.1| 677|Homo sapiens TAFII70 protein. 31 5.5
BC018115-1|AAH18115.1| 677|Homo sapiens TAF6 RNA polymerase II,... 31 5.5
AY149894-1|AAN10295.1| 677|Homo sapiens TAF6 RNA polymerase II,... 31 5.5
AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family... 31 5.5
AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated ant... 31 5.5
AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen C... 31 5.5
L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein... 30 7.3
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 30 9.6
BC109300-1|AAI09301.1| 784|Homo sapiens Sp4 transcription facto... 30 9.6
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 30 9.6
AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens ... 30 9.6
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 34.7 bits (76), Expect = 0.34
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +3
Query: 156 SHVHGTTSMTPTKASPSSTFKRS*RT-WPARATMQVKHQRWPK--PPELSPIYLPVSPVM 326
SH + + TP +ASP+ R+ T P R +++ H+ P PP SP P
Sbjct: 206 SH-RASPTRTPPRASPTRRPPRASPTRTPPRESLRTSHRASPTRMPPRASPTRRPPRASP 264
Query: 327 PVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT 437
P + +T + P T P + + PS + +T
Sbjct: 265 TGSPPRASPMTPPRASPRTPPRASPTTTPSRASLTRT 301
>AK223042-1|BAD96762.1| 433|Homo sapiens eukaryotic translation
elongation factor 1 alpha 1 variant protein.
Length = 433
Score = 33.9 bits (74), Expect = 0.59
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +2
Query: 302 LSAGIPGDACAAANVINSYTDGVRSGNFAGFRQSLGPFFGHVGQNLNLINQLVTNPGQLR 481
LS +PGD NV N VR GN AG ++ P G +I ++ +PGQ+
Sbjct: 270 LSEALPGDN-VGFNVKNVSVKDVRRGNVAGDSKNDPPMEA-AGFTAQVI--ILNHPGQIS 325
Query: 482 YSVGPALGC 508
P LGC
Sbjct: 326 AGYAPVLGC 334
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.78
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 4/129 (3%)
Frame = +3
Query: 168 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 347
GTT S +S S + P +T PE +P SPV P TS
Sbjct: 157 GTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 210
Query: 348 LTLTQTASGPETSPA----SDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVVPE 515
+ T T SGP T+P+ + +SVP++ T + + ++S T S P VP
Sbjct: 211 ASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTTSGP-GTTPSPVPT 269
Query: 516 VEESMTSKP 542
S TS P
Sbjct: 270 T--STTSAP 276
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 33.1 bits (72), Expect = 1.0
Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 5/130 (3%)
Frame = +3
Query: 63 QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTPTKASPSSTFKRS*RTWPA 242
Q+PT PS + + T S+ + TPT S T + T P
Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPK 1873
Query: 243 RA-TMQVKHQRWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS-- 407
+ T PK SP Y P SPV P P S T T + + P+ SP S S
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 408 VPSSDTWDKT 437
P T+ T
Sbjct: 1934 SPKGSTYSPT 1943
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 33.1 bits (72), Expect = 1.0
Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 5/130 (3%)
Frame = +3
Query: 63 QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTPTKASPSSTFKRS*RTWPA 242
Q+PT PS + + T S+ + TPT S T + T P
Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPK 1873
Query: 243 RA-TMQVKHQRWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS-- 407
+ T PK SP Y P SPV P P S T T + + P+ SP S S
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933
Query: 408 VPSSDTWDKT 437
P T+ T
Sbjct: 1934 SPKGSTYSPT 1943
>BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for
IMAGE:4824581) protein.
Length = 603
Score = 33.1 bits (72), Expect = 1.0
Identities = 22/105 (20%), Positives = 48/105 (45%)
Frame = +3
Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 350
T+ PT +SP + K S P+ ++M + P + + P ++P +P TS
Sbjct: 2 TSPFAPTMSSPKRSSKPSMSLAPSGSSMPTADPKPPASLKSTKSATPNRSLVPTKPATSR 61
Query: 351 TLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDT 485
+ S +++ ++ PS+ ++ + S + + V++DT
Sbjct: 62 NSVMSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDT 106
>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
protein.
Length = 3530
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNL 404
PKP L+P L +P +P++P+ + L Q + PET+ S L
Sbjct: 2518 PKP--LAPAPLAKAPRLPIKPVAAPVLAQDQASPETTSPSPEL 2558
>Z34282-1|CAA84036.1| 98|Homo sapiens mucin protein.
Length = 98
Score = 31.5 bits (68), Expect = 3.2
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +3
Query: 168 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 347
GTT S +S S + P +T PE +P SPV P TS
Sbjct: 3 GTTPSAVPTTSITSAPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 56
Query: 348 LTLTQTASGPETSPA----SDNLSVPSSDT 425
+ T T SGP T+P+ + +SVP++ T
Sbjct: 57 ASTTSTTSGPGTTPSPVPTTSTISVPTTST 86
>Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein.
Length = 94
Score = 31.5 bits (68), Expect = 3.2
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 315 SPVMPVQPLTSLTLTQTASGPETSPA----SDNLSVPSSDTWDKT*ILSINSSLTLVNSD 482
SPV P TS + T T SGP T+P+ + +SVP++ T + + ++S T S
Sbjct: 5 SPV-PTASTTSASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTTSG 63
Query: 483 TLSDQPWVVPEVEESMTSKP 542
P VP S TS P
Sbjct: 64 P-GTTPSPVPTT--STTSAP 80
>BC018708-1|AAH18708.1| 434|Homo sapiens zinc finger CCCH-type
containing 10 protein.
Length = 434
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 410
P P ++P+ + V+PV PV QPL +T++ T + T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429
>AK027357-1|BAB55059.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14451 fis, clone HEMBB1001834. ).
Length = 434
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +3
Query: 276 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 410
P P ++P+ + V+PV PV QPL +T++ T + T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429
>U31659-1|AAA84390.1| 677|Homo sapiens TAFII80 protein.
Length = 677
Score = 30.7 bits (66), Expect = 5.5
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338
V + P + P + F + A +T QV P S PV+ +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580
Query: 339 LTSLTLTQTASGPETSPA 392
+ L T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598
>L25444-1|AAA63643.1| 677|Homo sapiens TAFII70 protein.
Length = 677
Score = 30.7 bits (66), Expect = 5.5
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338
V + P + P + F + A +T QV P S PV+ +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580
Query: 339 LTSLTLTQTASGPETSPA 392
+ L T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598
>BC018115-1|AAH18115.1| 677|Homo sapiens TAF6 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 80kDa
protein.
Length = 677
Score = 30.7 bits (66), Expect = 5.5
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338
V + P + P + F + A +T QV P S PV+ +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580
Query: 339 LTSLTLTQTASGPETSPA 392
+ L T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598
>AY149894-1|AAN10295.1| 677|Homo sapiens TAF6 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 80kDa
protein.
Length = 677
Score = 30.7 bits (66), Expect = 5.5
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338
V + P + P + F + A +T QV P S PV+ +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580
Query: 339 LTSLTLTQTASGPETSPA 392
+ L T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598
>AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family C,
1 protein.
Length = 1142
Score = 30.7 bits (66), Expect = 5.5
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +3
Query: 291 LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 470
LSP+ +P SP+ L+SL Q S PE + L P + S+ S +++
Sbjct: 689 LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746
Query: 471 VNSDTLSDQPWVVPEVEESMTSKP 542
+S T P PE +S P
Sbjct: 747 CSSSTSLSLPQSFPESPQSPPEGP 770
>AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated
antigen protein.
Length = 1142
Score = 30.7 bits (66), Expect = 5.5
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +3
Query: 291 LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 470
LSP+ +P SP+ L+SL Q S PE + L P + S+ S +++
Sbjct: 689 LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746
Query: 471 VNSDTLSDQPWVVPEVEESMTSKP 542
+S T P PE +S P
Sbjct: 747 CSSSTSLSLPQSFPESPQSPPEGP 770
>AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen CT7
protein.
Length = 1142
Score = 30.7 bits (66), Expect = 5.5
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +3
Query: 291 LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 470
LSP+ +P SP+ L+SL Q S PE + L P + S+ S +++
Sbjct: 689 LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746
Query: 471 VNSDTLSDQPWVVPEVEESMTSKP 542
+S T P PE +S P
Sbjct: 747 CSSSTSLSLPQSFPESPQSPPEGP 770
>L12141-1|AAA58477.1| 347|Homo sapiens fork head-related protein
protein.
Length = 347
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 273 WPKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASG-PETSPASDNLSVP 413
W PE +Y PV+PV + PL S +TL +S P PAS S P
Sbjct: 15 WSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPGGLPASPLPSGP 63
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 29.9 bits (64), Expect = 9.6
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Frame = +3
Query: 183 TPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQ 362
TPT +T +S P +T ++ + PK E SP P P T +T
Sbjct: 859 TPTTTKEPTTIHKS----PDESTPELSAEPTPKALENSPKE-PGVPTTKTPAATKPEMTT 913
Query: 363 TASG----------PETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494
TA PET+ A+ ++ ++ T +KT I ++ T V S T D
Sbjct: 914 TAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQD 967
>BC109300-1|AAI09301.1| 784|Homo sapiens Sp4 transcription factor
protein.
Length = 784
Score = 29.9 bits (64), Expect = 9.6
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = +3
Query: 324 MPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPW 503
MP P +S T T TAS TS S + V S+DT + +S T+ S T +
Sbjct: 314 MPESPSSSTTCTTTAS---TSLTSSDTLVSSADTGQYASTSASSSERTIEESQTPAA--- 367
Query: 504 VVPEVEESMTSKPLGMQS 557
E + S +P GMQ+
Sbjct: 368 TESEAQSSSQLQPNGMQN 385
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 29.9 bits (64), Expect = 9.6
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Frame = +3
Query: 183 TPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQ 362
TPT +T +S P +T ++ + PK E SP P P T +T
Sbjct: 859 TPTTTKEPTTIHKS----PDESTPELSAEPTPKALENSPKE-PGVPTTKTPAATKPEMTT 913
Query: 363 TASG----------PETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494
TA PET+ A+ ++ ++ T +KT I ++ T V S T D
Sbjct: 914 TAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQD 967
>AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens
cDNA FLJ16561 fis, clone SYNOV4003981, moderately
similar to Homo sapiens proteoglycan 4, (megakaryocyte
stimulating ).
Length = 933
Score = 29.9 bits (64), Expect = 9.6
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Frame = +3
Query: 183 TPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQ 362
TPT +T +S P +T ++ + PK E SP P P T +T
Sbjct: 388 TPTTTKEPTTIHKS----PDESTPELSAEPTPKALENSPKE-PGVPTTKTPAATKPEMTT 442
Query: 363 TASG----------PETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494
TA PET+ A+ ++ ++ T +KT I ++ T V S T D
Sbjct: 443 TAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQD 496
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,187,820
Number of Sequences: 237096
Number of extensions: 2261887
Number of successful extensions: 7064
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7051
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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