Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30300
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 65 4e-11
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 65 4e-11
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 65 4e-11
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 62 5e-10
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical p... 51 7e-07
Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical p... 51 7e-07
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 49 4e-06
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 48 9e-06
U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical p... 46 2e-05
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 46 2e-05
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 46 2e-05
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 46 2e-05
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 46 2e-05
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 41 0.001
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 40 0.001
Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical pr... 33 0.21
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 32 0.36
AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.36
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 32 0.36
AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical ... 32 0.36
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 65.3 bits (152), Expect = 4e-11
Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Frame = +1
Query: 253 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 432
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 231
Query: 433 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 573
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 232 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 291
Query: 574 PQREATMTNLINKLPNCNHNLLAWLMRHFQHVVSNEQVN 690
+R + L KLP N+ L ++M H V +VN
Sbjct: 292 EERVEQLRQLARKLPVHNYETLKFIMLHLNRVSWFHEVN 330
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 65.3 bits (152), Expect = 4e-11
Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Frame = +1
Query: 253 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 432
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 460
Query: 433 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 573
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 461 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 520
Query: 574 PQREATMTNLINKLPNCNHNLLAWLMRHFQHVVSNEQVN 690
+R + L KLP N+ L ++M H V +VN
Sbjct: 521 EERVEQLRQLARKLPVHNYETLKFIMLHLNRVSWFHEVN 559
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 65.3 bits (152), Expect = 4e-11
Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Frame = +1
Query: 253 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 432
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 231
Query: 433 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 573
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 232 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 291
Query: 574 PQREATMTNLINKLPNCNHNLLAWLMRHFQHVVSNEQVN 690
+R + L KLP N+ L ++M H V +VN
Sbjct: 292 EERVEQLRQLARKLPVHNYETLKFIMLHLNRVSWFHEVN 330
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 65.3 bits (152), Expect = 4e-11
Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Frame = +1
Query: 253 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 432
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAFE 460
Query: 433 DRGPTFPYHWD--VPVACA-MLKAFISELPESILTQELHGQF-----EQATAIA-----E 573
D P+ A ++K ++ +LPE +LT EL+ F E +A A E
Sbjct: 461 RSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELYDDFVRLGTECCSAQASGSNCE 520
Query: 574 PQREATMTNLINKLPNCNHNLLAWLMRHFQHVVSNEQVN 690
+R + L KLP N+ L ++M H V +VN
Sbjct: 521 EERVEQLRQLARKLPVHNYETLKFIMLHLNRVSWFHEVN 559
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 61.7 bits (143), Expect = 5e-10
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Frame = +1
Query: 238 GVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQL 417
G P+ GV + S C D +P++V+ + ++ +G+ + IYR + L
Sbjct: 774 GAPQPVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNAL 830
Query: 418 RKLFTDRG---------PTFPYHW-DVPVACAMLKAFISELPESILTQELHGQFEQATAI 567
++ ++RG + W DV V ++LK F+ +LPE +LT +L+ F A I
Sbjct: 831 KESLSNRGFDSVDLSKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRI 890
Query: 568 A-EPQREATMTNLINKLPNCNHNLLAWLMRHFQHVVSNEQVNQ 693
+ R + NL+ KLP +++ L +L+ H + + VN+
Sbjct: 891 STHHNRLHKLRNLLRKLPRPHYDTLRFLIVHLSEITKHSDVNK 933
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical protein
C04D8.1 protein.
Length = 1317
Score = 61.7 bits (143), Expect = 5e-10
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Frame = +1
Query: 238 GVALPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQL 417
G P+ GV + S C D +P++V+ + ++ +G+ + IYR + L
Sbjct: 652 GAPQPVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNAL 708
Query: 418 RKLFTDRG---------PTFPYHW-DVPVACAMLKAFISELPESILTQELHGQFEQATAI 567
++ ++RG + W DV V ++LK F+ +LPE +LT +L+ F A I
Sbjct: 709 KESLSNRGFDSVDLSKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRI 768
Query: 568 A-EPQREATMTNLINKLPNCNHNLLAWLMRHFQHVVSNEQVNQ 693
+ R + NL+ KLP +++ L +L+ H + + VN+
Sbjct: 769 STHHNRLHKLRNLLRKLPRPHYDTLRFLIVHLSEITKHSDVNK 811
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical protein
C38D4.5 protein.
Length = 837
Score = 55.6 bits (128), Expect = 3e-08
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Frame = +1
Query: 250 PIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLR-KL 426
P+FG L + H+++ +P +R + +++ GL++ IYR + Q++R +
Sbjct: 606 PVFGSTLSAICQ----HENSLVPKFIRVITEVIESKGLETDGIYRVSGNLSAVQKIRCQA 661
Query: 427 FTDRGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQ-REATMTNL 603
D D+ V LK F EL + + LH ++ A + R L
Sbjct: 662 DQDNYKALVSEEDIHVLTGALKLFFRELTDPLFPISLHKEYTSAMQMPNATTRFKKFEEL 721
Query: 604 INKLPNCNHNLLAWLMRHFQHVVSNEQVNQ 693
+++LPN N L L+RH V S+ N+
Sbjct: 722 LSRLPNENRETLKMLLRHLNRVASHSSQNR 751
>Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical
protein W02B12.8b protein.
Length = 245
Score = 51.2 bits (117), Expect = 7e-07
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Frame = +1
Query: 256 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPD--KIKFQQLR--- 420
FGVPL+ + H +P +V I+YL+AH L + ++R + IK Q R
Sbjct: 48 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFRKSANIGSIKRLQDRINK 103
Query: 421 --KLFTDRGPTFPYHWDVPV--ACAMLKAFISELPESILTQELHGQFEQATAIAEPQREA 588
K+ + P + + V A +LK F L E + T L+ + + +++ ++ A
Sbjct: 104 GEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAALSEVSKTEKSA 163
Query: 589 TMTNLINKLPNCNHNLLAWLMRHFQHVVSNEQVN 690
+ + LP N+ LL +++ V N +VN
Sbjct: 164 AVKEFVKLLPRENYILLKTVIKFLTRVAENSKVN 197
>Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical
protein W02B12.8a protein.
Length = 444
Score = 51.2 bits (117), Expect = 7e-07
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Frame = +1
Query: 256 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPD--KIKFQQLR--- 420
FGVPL+ + H +P +V I+YL+AH L + ++R + IK Q R
Sbjct: 247 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFRKSANIGSIKRLQDRINK 302
Query: 421 --KLFTDRGPTFPYHWDVPV--ACAMLKAFISELPESILTQELHGQFEQATAIAEPQREA 588
K+ + P + + V A +LK F L E + T L+ + + +++ ++ A
Sbjct: 303 GEKIDFENDPEYKDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAALSEVSKTEKSA 362
Query: 589 TMTNLINKLPNCNHNLLAWLMRHFQHVVSNEQVN 690
+ + LP N+ LL +++ V N +VN
Sbjct: 363 AVKEFVKLLPRENYILLKTVIKFLTRVAENSKVN 396
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 48.8 bits (111), Expect = 4e-06
Identities = 32/140 (22%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Frame = +1
Query: 313 LPLVVRDSIDYLQAHG-LKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYHWDVPV--ACA 483
+P+ + I +++ +G + + +YR ++ ++ K F G +D PV A
Sbjct: 1161 IPIYLEKCIQFIEQNGGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAAT 1220
Query: 484 MLKAFISELPESILTQELHGQFEQATAIAEPQREAT-MTNLINKLPNCNHNLLAWLMRHF 660
LK+F S LPES++ H +++Q +++ ++ + + + LP N +L +L+ H
Sbjct: 1221 ALKSFFSCLPESLIPTAYHLRWKQIMMVSDDIKKIDGIRDALAILPVSNQKVLQYLVTHL 1280
Query: 661 QHVVSNEQ--VNQANIKR*W 714
V + + +N N+ + W
Sbjct: 1281 TKVSCSPKTVMNSNNLSKVW 1300
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 48.8 bits (111), Expect = 4e-06
Identities = 32/140 (22%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Frame = +1
Query: 313 LPLVVRDSIDYLQAHG-LKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYHWDVPV--ACA 483
+P+ + I +++ +G + + +YR ++ ++ K F G +D PV A
Sbjct: 1161 IPIYLEKCIQFIEQNGGFEQEGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDTPVHVAAT 1220
Query: 484 MLKAFISELPESILTQELHGQFEQATAIAEPQREAT-MTNLINKLPNCNHNLLAWLMRHF 660
LK+F S LPES++ H +++Q +++ ++ + + + LP N +L +L+ H
Sbjct: 1221 ALKSFFSCLPESLIPTAYHLRWKQIMMVSDDIKKIDGIRDALAILPVSNQKVLQYLVTHL 1280
Query: 661 QHVVSNEQ--VNQANIKR*W 714
V + + +N N+ + W
Sbjct: 1281 TKVSCSPKTVMNSNNLSKVW 1300
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/94 (28%), Positives = 49/94 (52%)
Frame = +1
Query: 253 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 432
+ G+PL +SV D LP R +ID+++ +GL ++ IYR P K + +L +
Sbjct: 52 VLGLPLTESVSADPSLDGIPLPSFFRYAIDFVEENGLCTEGIYRLSPPKSRLDELERR-A 110
Query: 433 DRGPTFPYHWDVPVACAMLKAFISELPESILTQE 534
+ G + D A ++K F+ ++PE ++ E
Sbjct: 111 NCGEKMIFA-DAHDAAGLIKRFLRQIPEPVVPIE 143
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 47.6 bits (108), Expect = 9e-06
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Frame = +1
Query: 220 EEIFTLGVALPIFGVPLQQ--SVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEP 393
E + + P+FGVPL + S+++ R V+ D+L+ +G+ + I+R
Sbjct: 227 ERMIATALPRPVFGVPLDEHLSIQKERISG------VLTKCCDFLRQNGMNERGIFRVSG 280
Query: 394 DKIKFQQLRKLFTDRGPTFP----YHWDVPVACAMLKAFISELPESILTQELHGQFEQAT 561
+ K +++R D G Y+ D + LKA++ ELP+ + L + +A
Sbjct: 281 NASKIKRIRAAL-DAGQFDADEKHYNNDPHAVASTLKAYLRELPDPLTMDSLQSDWVEAI 339
Query: 562 AIAEPQREATMTNLINKLPNCNHNLLAWLMR 654
+ +R + + + K+ + L +LM+
Sbjct: 340 NLEGEERFSAIDRCLKKMTRGHRQNLIYLMK 370
>U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical
protein T04C9.1c protein.
Length = 475
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Frame = +1
Query: 301 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 456
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 66 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 124
Query: 457 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNL-INKLPNCNHN 633
W+ + +K F+ LPE ++T ELH F A + + + +++LP +
Sbjct: 125 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLR 184
Query: 634 LLAWLMRHFQHV--VSNEQV 687
+L ++RH + V +SNE +
Sbjct: 185 MLEIVVRHLKRVADLSNENL 204
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Frame = +1
Query: 301 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 456
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 406 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 464
Query: 457 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNL-INKLPNCNHN 633
W+ + +K F+ LPE ++T ELH F A + + + +++LP +
Sbjct: 465 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLR 524
Query: 634 LLAWLMRHFQHV--VSNEQV 687
+L ++RH + V +SNE +
Sbjct: 525 MLEIVVRHLKRVADLSNENL 544
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Frame = +1
Query: 301 DDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPY-------- 456
DD G V + ID L+ G+ + +YR K Q++ L DR
Sbjct: 406 DDIGFEFV-QQCIDILEESGIHEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDD 464
Query: 457 HWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREATMTNL-INKLPNCNHN 633
W+ + +K F+ LPE ++T ELH F A + + + +++LP +
Sbjct: 465 EWETKTISSAVKTFLRNLPEPLMTFELHNVFINAAKMGDATMRIDHIHFYVHQLPAQHLR 524
Query: 634 LLAWLMRHFQHV--VSNEQV 687
+L ++RH + V +SNE +
Sbjct: 525 MLEIVVRHLKRVADLSNENL 544
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Frame = +1
Query: 253 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 420
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 486 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 541
Query: 421 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREAT 591
L T+ + P D V ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 542 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQT 598
Query: 592 MTNLINKLPNC 624
+L+ K+ +C
Sbjct: 599 NRHLVLKIIDC 609
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Frame = +1
Query: 253 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 420
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 684 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 739
Query: 421 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREAT 591
L T+ + P D V ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 740 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQT 796
Query: 592 MTNLINKLPNC 624
+L+ K+ +C
Sbjct: 797 NRHLVLKIIDC 807
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Frame = +1
Query: 253 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 420
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 752 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 807
Query: 421 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREAT 591
L T+ + P D V ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 808 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQT 864
Query: 592 MTNLINKLPNC 624
+L+ K+ +C
Sbjct: 865 NRHLVLKIIDC 875
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Frame = +1
Query: 253 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIY----RTEPDKIKFQQLR 420
+FG+ L + V+R R DT P+V+ I ++ G+ +Y E K+ +L
Sbjct: 684 VFGISLSRLVQRER--RDT--PIVLTRLIQEIEKRGVDYSGLYVLCGSVEKKKMLRAELE 739
Query: 421 K--LFTD-RGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQFEQATAIAEPQREAT 591
L T+ + P D V ++K F+ ELPE +++ ++HG +A ++A P T
Sbjct: 740 SNPLGTELAAESIP---DTNVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPNDVQT 796
Query: 592 MTNLINKLPNC 624
+L+ K+ +C
Sbjct: 797 NRHLVLKIIDC 807
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 40.7 bits (91), Expect = 0.001
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Frame = +1
Query: 313 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQ-LRKLFTDRGPTFPYHWD---VPVAC 480
+P++V I ++ A+G+K + IYR + + L KL D +P H + V
Sbjct: 585 IPVIVDKCIRFVSAYGMKCEGIYRRNGKVTEAKTILTKLTEDPVGYYPVHENDETVYAVA 644
Query: 481 AMLKAFISELPESILTQELHGQ-FEQATAIAEPQREATMTNLINKLPNCNHNLLAWLMRH 657
+L+ F +L + F+ AT + A LIN + + L L+ H
Sbjct: 645 DVLRQFFRKLDAPLFPSSSQADLFDLATESQSDELCARYAQLINTFELVHRSTLKKLIGH 704
Query: 658 FQHVVSNEQVNQANIK 705
++V + Q N+A+++
Sbjct: 705 LKNVSEHAQENRASVE 720
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Frame = +1
Query: 316 PLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYH-WDVPVACAMLK 492
P + +D+L+ G ++ I+R P + F++L K D+G +H ++ V ++LK
Sbjct: 264 PQPIMTIVDHLRMDGFDAEGIFRKSPKQSTFKEL-KCELDKGVVPDFHKYNTHVLASILK 322
Query: 493 AFISELPESILTQELHGQFE--QATAIAEPQREATMT---NLINKLPNCNHNLLAWLMRH 657
++ +P IL L G +E EP E ++ L++ LP + LLA +++
Sbjct: 323 EYLRSIPGKIL---LSGNYELWMREIADEPNTEKKVSCCRALLSHLPTSHSILLANVLK- 378
Query: 658 FQHVVSNEQVNQAN 699
+ +SN ++ N
Sbjct: 379 LLNKISNSPSSKMN 392
>Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical
protein F45H7.2b protein.
Length = 722
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 484 MLKAFISELPESILTQELHGQFEQ-ATAIAEPQREATMTNLINKLPNCNHNLLAWLMRHF 660
+LK + +LPE ++T ++ F + + + +R + I LP+ N L L+
Sbjct: 348 LLKQYFRDLPEPLMTVKMSEVFANICSVVPDVERITALQYAILLLPDENREALKTLLLFL 407
Query: 661 QHVVSNEQVN 690
+ V N QVN
Sbjct: 408 KEVSRNSQVN 417
>Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical
protein F45H7.2a protein.
Length = 842
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 484 MLKAFISELPESILTQELHGQFEQ-ATAIAEPQREATMTNLINKLPNCNHNLLAWLMRHF 660
+LK + +LPE ++T ++ F + + + +R + I LP+ N L L+
Sbjct: 468 LLKQYFRDLPEPLMTVKMSEVFANICSVVPDVERITALQYAILLLPDENREALKTLLLFL 527
Query: 661 QHVVSNEQVN 690
+ V N QVN
Sbjct: 528 KEVSRNSQVN 537
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 313 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGP-TFPYHWDVPVACAML 489
+P + ++ + + HG+ + I+R E + ++ + +G P + V C M+
Sbjct: 65 VPKFIVNAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQRDIPNDYSVIDVCTMV 124
Query: 490 KAFISELPESILTQE 534
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>AC199241-1|ABO33279.1| 343|Caenorhabditis elegans Hypothetical
protein 2RSSE.1 protein.
Length = 343
Score = 32.3 bits (70), Expect = 0.36
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Frame = +1
Query: 256 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTD 435
FGVP+ ++ HD +P + + + G KDI+R ++ + ++L ++
Sbjct: 28 FGVPINEAF----AHD---IPATLLMLLLKVNKDGPAKKDIWRAPGNQAQVRKLSQVMQH 80
Query: 436 RGPTFPYHWDVPVACAMLKAFISELPESILTQELHGQ-FEQA-TAIAEPQREATMTNLIN 609
++ V A +++K F+S+LP I ++ F A T + ++ +
Sbjct: 81 GRLVNIENFTVYTAASVIKKFLSKLPNGIFGRDNEETLFNSASTGMDIEKQRQVFYRIFG 140
Query: 610 KLPNCNHNLLAWLMRHFQHVVSNEQVNQAN 699
LP + +LL L F+ VV++ +N
Sbjct: 141 SLPVASQHLLVLLFGTFR-VVADSSDGHSN 169
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 313 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPT-FPYHWDVPVACAML 489
+P + + + + HG+ + I+R E + ++ + +G + P + V C M+
Sbjct: 65 VPKFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMV 124
Query: 490 KAFISELPESILTQE 534
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
>AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4b protein.
Length = 285
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 313 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPT-FPYHWDVPVACAML 489
+P + + + + HG+ + I+R E + ++ + +G + P + V C M+
Sbjct: 65 VPKFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMV 124
Query: 490 KAFISELPESILTQE 534
K F+ +L +L E
Sbjct: 125 KRFLRDLKPPLLDSE 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,690,033
Number of Sequences: 27780
Number of extensions: 278162
Number of successful extensions: 828
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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