Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30299
(722 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 27 0.78
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 27 0.78
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 27 0.78
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 27 0.78
AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. 25 2.4
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 25 2.4
AY146731-1|AAO12091.1| 150|Anopheles gambiae odorant-binding pr... 25 3.1
AF437887-1|AAL84182.1| 150|Anopheles gambiae odorant binding pr... 25 3.1
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 24 4.1
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 9.6
AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein. 23 9.6
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 26.6 bits (56), Expect = 0.78
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +2
Query: 530 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILK 700
+SG+ + H V Y+G + A+ D + D K +R Y + + I++
Sbjct: 155 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 26.6 bits (56), Expect = 0.78
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +2
Query: 530 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILK 700
+SG+ + H V Y+G + A+ D + D K +R Y + + I++
Sbjct: 155 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 26.6 bits (56), Expect = 0.78
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +2
Query: 530 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILK 700
+SG+ + H V Y+G + A+ D + D K +R Y + + I++
Sbjct: 155 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 26.6 bits (56), Expect = 0.78
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +2
Query: 530 ESGEAIKHVVHEYKGAGVALAMFNTDASIIDFAHSSFKFALDRKYPLYLSTKNTILK 700
+SG+ + H V Y+G + A+ D + D K +R Y + + I++
Sbjct: 155 DSGDGVSHTVPIYEGYALPHAILRMDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211
>AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein.
Length = 356
Score = 25.0 bits (52), Expect = 2.4
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 512 QEYQHLGQQSQLLCIDQHEHDVQ**WV-CPTLLQVS 408
+E + + ++++C+DQH + W+ C TL +S
Sbjct: 293 EEMRKVRLAARVVCVDQHRPSIPSRWIACDTLHAIS 328
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 25.0 bits (52), Expect = 2.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 443 IGRHAHADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVH 562
+GR +AD+Y A D+ + AG ++ E +KH+VH
Sbjct: 500 LGRPTYADRYDANDYHL-HAGRNAMV--KEFAAKLKHLVH 536
>AY146731-1|AAO12091.1| 150|Anopheles gambiae odorant-binding
protein AgamOBP4 protein.
Length = 150
Score = 24.6 bits (51), Expect = 3.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 168 SMSKKGRISFSLIRSQIILVISSPRMST 85
+M+KKG ISFS +QI ++ P M T
Sbjct: 83 TMTKKGEISFSKTMAQIEAML-PPEMKT 109
>AF437887-1|AAL84182.1| 150|Anopheles gambiae odorant binding
protein protein.
Length = 150
Score = 24.6 bits (51), Expect = 3.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 168 SMSKKGRISFSLIRSQIILVISSPRMST 85
+M+KKG ISFS +QI ++ P M T
Sbjct: 83 TMTKKGEISFSKTMAQIEAML-PPEMKT 109
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 24.2 bits (50), Expect = 4.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 490 NKVSCFVLISMSMTSNDDGFV 428
++V+C L+SM+M N DG V
Sbjct: 1485 HRVACKRLVSMNMPLNSDGTV 1505
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.0 bits (47), Expect = 9.6
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 68 IKAG-PVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEA 244
+ AG P ILG + I++D + + + P +++ + DL + T D+V EA
Sbjct: 682 VTAGVPQGSILGPTLWNIMYDGVLDVPLPPDVEVIGYADDLALLVPATTTDEVRARAEEA 741
Query: 245 I 247
+
Sbjct: 742 V 742
>AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein.
Length = 437
Score = 23.0 bits (47), Expect = 9.6
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 338 GFSTFSSV*ILQLSSHQELWSHI*CPHCISLWPQHNQL*LDHQSYHDFPYPSRRHV 171
G S + + +QL+ E W I ++LW ++ Q +H Y + RR V
Sbjct: 209 GESEMTEISSMQLTGDYEGWLEINVTGAVNLWLKNRQ--ANHGLYIGAYFGERREV 262
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,817
Number of Sequences: 2352
Number of extensions: 15722
Number of successful extensions: 48
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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