Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30298
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.8  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 257 NRQSALVRISNYNSLSEIQVVFNEPSK 177
           NR+  L    ++N L E   +FNE +K
Sbjct: 125 NRRKILTPAFHFNILQEFIQIFNEETK 151


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 215 LSEIQVVFNEPSKFCLDRYDHTE 147
           L  +++VF +   FCL  ++H E
Sbjct: 10  LHSVRIVFVQSEIFCLVNFNHRE 32


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 257 NRQSALVRISNYNSLSEIQVVFNEPSK 177
           NR+  L    ++N L E   +FNE +K
Sbjct: 125 NRRKILTPAFHFNILQEFIQIFNEETK 151


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,030
Number of Sequences: 336
Number of extensions: 3189
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)