Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30298
         (787 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434...    28   9.7  

>11_06_0151 - 20643032-20643085,20643202-20643307,20643415-20643495,
            20643588-20643715,20643829-20643903,20644853-20645374,
            20646622-20646687,20647990-20648076,20648173-20648247,
            20648705-20648821,20648932-20649015,20649152-20649217,
            20649352-20649417,20650079-20650150,20650231-20650332,
            20650428-20650605,20650700-20650755,20653159-20653269,
            20653354-20653422,20653558-20653741,20653826-20653914,
            20654070-20654147,20654509-20654631,20654755-20654874,
            20654975-20655055,20655285-20655431,20655533-20655611,
            20657114-20657223,20659138-20659236,20659467-20659582,
            20659673-20659781,20659839-20660069,20660152-20660417,
            20661349-20661506,20661601-20661751,20661897-20661966,
            20662203-20662232
          Length = 1451

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +3

Query: 558  NDVKLPVDLFDWTH 599
            +D+ LPVDLFD+TH
Sbjct: 1228 DDILLPVDLFDFTH 1241


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,578,488
Number of Sequences: 37544
Number of extensions: 305937
Number of successful extensions: 471
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)