Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30298
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    24   1.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.4  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   5.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   5.6  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 296 IKAHRLYNRNTDIYVILSLDCVV 364
           ++A   YN   DIY  LS DC V
Sbjct: 112 VEAEENYNLLEDIYETLSYDCDV 134


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 447 KLARLPPFYQFMP 409
           KL +LPP Y+ MP
Sbjct: 153 KLMKLPPMYEVMP 165


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 447 KLARLPPFYQFMP 409
           KL +LPP Y+ MP
Sbjct: 153 KLMKLPPMYEVMP 165


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -3

Query: 782 GLLICY--FIKDLKNRCYHRSCIK*SIYNFLFYEG 684
           G ++C+  F      R + R+CI  ++++ LF+ G
Sbjct: 17  GFILCWLPFFTMYLVRAFCRNCIHPTVFSVLFWLG 51


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -3

Query: 782 GLLICY--FIKDLKNRCYHRSCIK*SIYNFLFYEG 684
           G ++C+  F      R + R+CI  ++++ LF+ G
Sbjct: 465 GFILCWLPFFTMYLVRAFCRNCIHPTVFSVLFWLG 499


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,229
Number of Sequences: 438
Number of extensions: 3935
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)