Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30297
(674 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 91 2e-18
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 88 1e-17
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 80 3e-15
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 79 4e-15
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 74 2e-13
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 70 3e-12
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 68 1e-11
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 68 1e-11
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 68 1e-11
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 60 2e-09
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 60 3e-09
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 60 3e-09
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 59 5e-09
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 59 6e-09
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 59 6e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 58 1e-08
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 58 1e-08
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 58 1e-08
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 56 3e-08
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 53 3e-07
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 45 1e-04
AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-P... 31 1.9
AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-P... 31 1.9
AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p pro... 29 4.4
AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,... 29 4.4
AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p pro... 29 5.8
AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA... 29 5.8
BT021444-1|AAX33592.1| 667|Drosophila melanogaster GH02866p pro... 29 7.7
AY058634-1|AAL13863.1| 382|Drosophila melanogaster LD33276p pro... 29 7.7
AL109630-8|CAB51688.1| 382|Drosophila melanogaster EG:BACR7A4.1... 29 7.7
AE014298-131|AAF45570.1| 382|Drosophila melanogaster CG3704-PA ... 29 7.7
AE013599-3350|AAF46812.1| 667|Drosophila melanogaster CG6758-PA... 29 7.7
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 90.6 bits (215), Expect = 2e-18
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Frame = +1
Query: 61 NIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD-IEALLGMGSSVILAGDLNCKHIRWN 237
+++A+ I L + + +A+VY PP VL + ++ +G I AGD N KH W
Sbjct: 87 HLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQFLDFFQALGPHFIAAGDYNAKHTHWG 146
Query: 238 SHTTTPNGRRLDALVDDLA--FDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIE 411
S P G++L + D V+P +PT++P ++ PD++D A+ KN++ L E
Sbjct: 147 SRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLNKLPDLIDFAVTKNISRSLVKAE 206
Query: 412 VVSELDSDHRPVVMKLGRAPDSV-PVTR 492
+ +L SDH PV++ L R ++V P TR
Sbjct: 207 CLPDLSSDHSPVLIHLRRYAENVKPPTR 234
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 87.8 bits (208), Expect = 1e-17
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 3/220 (1%)
Frame = +1
Query: 7 IYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLG-M 183
I + +L PL P A A ++ + I T PI +VY PP + + + +L
Sbjct: 70 ILIKNSLAHFPLTPIATAKVQLAPAVIE-TALGPISFGAVYCPPRFAWTTDEFKDILEEF 128
Query: 184 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDIL 363
+ I+AGD N H W + + G L LV + D +A PT YP P +
Sbjct: 129 QTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGSPGYI 188
Query: 364 DIALLKNVTLRLHS-IEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHTLGISLAESD 540
D AL K V L +H+ I V EL SDH P+V+ L S P ++ T + + +S
Sbjct: 189 DFALTKGV-LGIHANISAVVELSSDHLPLVITLDAGAISYPKMERLITRRT-NLEVFQSQ 246
Query: 541 PPS-LPFNPDSIPSPQDTAEAIDILTSHITSTLDRSSKQV 657
S LP N +I S QD +AI++LT++I S +++ +
Sbjct: 247 LESTLPLN-TAINSGQDVDDAIELLTNNIKSAARLATRSI 285
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 79.8 bits (188), Expect = 3e-15
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Frame = +1
Query: 115 IASVYLPPDKIVLSSD--IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVD 285
+A+VY PP + +S D +E +G I AGD N KH W S TP G++L +AL
Sbjct: 104 LAAVYCPP-RFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTK 162
Query: 286 -DLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 459
+ D V+P PT++P + PD++D A+ K+V + + E +++L SDH PV + +
Sbjct: 163 PENKLDYVSPGKPTYWPADPRKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNM 221
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 79.4 bits (187), Expect = 4e-15
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Frame = +1
Query: 115 IASVYLPPDKIVLSSD--IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVD 285
+A+VY PP + +S D +E +G I AGD N KH W S +P G++L +AL
Sbjct: 104 LAAVYCPP-RFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTK 162
Query: 286 -DLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLG 462
+ D V+P PT++P + PD++D A+ K+V + + E +++L SDH PV + +
Sbjct: 163 PENKLDYVSPGKPTYWPADPRKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNML 222
Query: 463 RAPDSVPVTRTVVDWHT 513
P V + ++ T
Sbjct: 223 TRPHIVDPPYRLTNFRT 239
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 74.1 bits (174), Expect = 2e-13
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
Frame = +1
Query: 4 VIYYRRALHCVPLDPPALANIEASVCRISL-TGHAPIVIASVYLPPDKIVLSSDIEALLG 180
VI R H PL P ++ + + R+ L T + +A+VYLPP + + D +++
Sbjct: 71 VIIKSRLCHS-PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKSMFA 127
Query: 181 -MGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPD 357
+G+ I GD N KH W + + P G+ L ++ + ++A PT Y N P
Sbjct: 128 ALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLLTPS 187
Query: 358 ILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVP 483
LD + + ++ + EL SDH P++ L P P
Sbjct: 188 ALDFFITCGYGMGRLDVQTLQELSSDHLPILAVLHATPLKKP 229
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 69.7 bits (163), Expect = 3e-12
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 1/207 (0%)
Frame = +1
Query: 7 IYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPD-KIVLSSDIEALLGM 183
++ R L P +I+ S +++ TG + +++Y P +I + +
Sbjct: 71 VFVRTTLRHFPQRVIETRHIQLSSVKVA-TGLGDLQFSAIYCSPSTRIEERHFTDIIRAC 129
Query: 184 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDIL 363
G ++ GD N +H W +P GR L + I+A +PT YP +H P +
Sbjct: 130 GQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPSCI 189
Query: 364 DIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDWHTLGISLAESDP 543
D A+ + L +I +LDSDH P+++ + V + +V HT ++ +
Sbjct: 190 DFAVYHGIPDHLATITQSWDLDSDHLPLIISIETDSTHVNPSPRLVTKHTDLLAFSRQLE 249
Query: 544 PSLPFNPDSIPSPQDTAEAIDILTSHI 624
+ N ++ S ++ A+D LT I
Sbjct: 250 SLISLN-TTLNSGEEIEMAVDNLTESI 275
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.7 bits (158), Expect = 1e-11
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Frame = +1
Query: 55 LANIEASVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDLNCKHI 228
+A I +S R +T API VY L + E LL S IL GD NCKH
Sbjct: 104 IALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHR 163
Query: 229 RWNSHTTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHS 405
W ++ + GR L +++ DIVA TH+P + +P LD A+ K +
Sbjct: 164 LWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFHTQKLK 223
Query: 406 IEVVSELDSDHRPVVMKLGRAPDSVPVTRT---VVDWHTLGISLAESDPPSLPFNPDSIP 576
EL SDH P+ + L +T ++ T ++ + N + I
Sbjct: 224 TYSTDELSSDHLPIQIVLDPDDSDWQHNKTNNAIIQKRTDLTKFKKNLENKILLNTE-IR 282
Query: 577 SPQDTAEAIDILTSHITSTLDRSS 648
+ QD + IDIL ++I S + ++
Sbjct: 283 TGQDIDDCIDILINNIKSAANEAT 306
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.7 bits (158), Expect = 1e-11
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Frame = +1
Query: 55 LANIEASVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDLNCKHI 228
+A I +S R +T API VY L + E LL S IL GD NCKH
Sbjct: 104 IALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHR 163
Query: 229 RWNSHTTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHS 405
W ++ + GR L +++ DIVA TH+P + +P LD A+ K +
Sbjct: 164 LWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFHTQKLK 223
Query: 406 IEVVSELDSDHRPVVMKLGRAPDSVPVTRT---VVDWHTLGISLAESDPPSLPFNPDSIP 576
EL SDH P+ + L +T ++ T ++ + N + I
Sbjct: 224 TYSTDELSSDHLPIQIVLDPDDSDWQHNKTNNAIIQKRTDLTKFKKNLENKILLNTE-IR 282
Query: 577 SPQDTAEAIDILTSHITSTLDRSS 648
+ QD + IDIL ++I S + ++
Sbjct: 283 TGQDIDDCIDILINNIKSAANEAT 306
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.7 bits (158), Expect = 1e-11
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Frame = +1
Query: 55 LANIEASVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDLNCKHI 228
+A I +S R +T API VY L + E LL S IL GD NCKH
Sbjct: 104 IALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHR 163
Query: 229 RWNSHTTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHS 405
W ++ + GR L +++ DIVA TH+P + +P LD A+ K +
Sbjct: 164 LWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFHTQKLK 223
Query: 406 IEVVSELDSDHRPVVMKLGRAPDSVPVTRT---VVDWHTLGISLAESDPPSLPFNPDSIP 576
EL SDH P+ + L +T ++ T ++ + N + I
Sbjct: 224 TYSTDELSSDHLPIQIVLDPDDSDWQHNKTNNAIIQKRTDLTKFKKNLENKILLNTE-IR 282
Query: 577 SPQDTAEAIDILTSHITSTLDRSS 648
+ QD + IDIL ++I S + ++
Sbjct: 283 TGQDIDDCIDILINNIKSAANEAT 306
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.5 bits (140), Expect = 2e-09
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 109 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRR 267
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 268 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 444
L +A+ D +I+A TH+P + P +D ++ K + I V++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSVADLSSDHLP 232
Query: 445 VVMKL 459
+++++
Sbjct: 233 ILLEI 237
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 60.1 bits (139), Expect = 3e-09
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 109 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRR 267
IVIASVY PP L +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLRWLPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 268 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 444
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 173 LYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRFEKRISSGADLSSDHLP 232
Query: 445 VVMKL 459
+++++
Sbjct: 233 ILLEI 237
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 60.1 bits (139), Expect = 3e-09
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 109 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRR 267
IVIASVY PP +D+ E +G + +IL GD N KH +W G
Sbjct: 125 IVIASVYCPPSLSWSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAA 184
Query: 268 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 444
L DA+ D +IVA + TH+P + P +D ++ K + I + L SDH P
Sbjct: 185 LYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSICKRLGRYEKRISSSAHLSSDHLP 244
Query: 445 VVMKL 459
+++++
Sbjct: 245 ILLEI 249
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 59.3 bits (137), Expect = 5e-09
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Frame = +1
Query: 46 PPALANIEASV-CR-ISLTGHAPIVIASVYLPPDKIVLSSDI-EALLGMGSSVILAGDLN 216
P NI +S+ C + L I I + Y+PP +I SSDI E L + S IL GDLN
Sbjct: 78 PHTYRNINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISEILQNLNGSTILLGDLN 137
Query: 217 CKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLR 396
W S T G++++ ++ + + ++ +PTH L+ + +DI+L+
Sbjct: 138 SWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTH--LSTHNTFTHIDISLISPQIAH 195
Query: 397 LHSIEVVSEL-DSDHRPVVMKLG---RAPDSVPVTRTVVD 504
+ S + L SDH P+ + + R +++P+ + D
Sbjct: 196 MCSWSISDNLHGSDHFPITIHINTPTRPDNTLPLPKYKTD 235
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 58.8 bits (136), Expect = 6e-09
Identities = 34/105 (32%), Positives = 53/105 (50%)
Frame = +1
Query: 142 KIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTP 321
K + SD+ + + + ++ GD N +H W G+ L+ L D F I+ P P
Sbjct: 139 KSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQP 198
Query: 322 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMK 456
T+ P N + LD+ L N+ +L + V+ EL SDH PVV+K
Sbjct: 199 TYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVIK 242
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 58.8 bits (136), Expect = 6e-09
Identities = 34/105 (32%), Positives = 53/105 (50%)
Frame = +1
Query: 142 KIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTP 321
K + SD+ + + + ++ GD N +H W G+ L+ L D F I+ P P
Sbjct: 87 KSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQP 146
Query: 322 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMK 456
T+ P N + LD+ L N+ +L + V+ EL SDH PVV+K
Sbjct: 147 TYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVIK 190
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.0 bits (134), Expect = 1e-08
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 109 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRR 267
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 268 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 444
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 232
Query: 445 VVMKL 459
+++++
Sbjct: 233 ILLEI 237
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 58.0 bits (134), Expect = 1e-08
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 109 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRR 267
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 75 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 134
Query: 268 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 444
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 135 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 194
Query: 445 VVMKL 459
+++++
Sbjct: 195 ILLEI 199
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.0 bits (134), Expect = 1e-08
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 109 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRR 267
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 268 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 444
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 232
Query: 445 VVMKL 459
+++++
Sbjct: 233 ILLEI 237
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 56.4 bits (130), Expect = 3e-08
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Frame = +1
Query: 4 VIYYRRALHCVPLDPPALANIEASVCRISL-TGHAPIVIASVYLPPDKIVLSSDIEALLG 180
VI R H PL P ++ + + R+ L T + +A+VYLPP + + D +++
Sbjct: 71 VIIKSRLCHS-PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKSMFA 127
Query: 181 -MGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLN 339
+G+ I GD N KH W + + P G+ L ++ + ++A PT Y N
Sbjct: 128 ALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYN 181
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 53.2 bits (122), Expect = 3e-07
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +1
Query: 166 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNI 342
E LG + IL GD N KH +W G L +A+ D +I+A TH+P +
Sbjct: 23 EKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDT 82
Query: 343 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 459
P +D ++ K + I ++L SDH P+++++
Sbjct: 83 RKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEI 121
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 44.8 bits (101), Expect = 1e-04
Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Frame = +1
Query: 64 IEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSV-ILAGDLNCKHIRWNS 240
I+ I++ + I S Y+ P K + + + + + ++ GD N H W S
Sbjct: 82 IDIEAIAINIESKLKLNIFSTYISPTKNITNQTLHNTFNIQQTPSLITGDFNGWHHPWGS 141
Query: 241 HTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVS 420
TT G+ +D++ ++ +PTH+ + + +D+ L + ++++
Sbjct: 142 PTTNKRGKITHRFIDNMHLILLNDKSPTHFSTHNTYTH--IDLTLCSPILAPHAKWKILN 199
Query: 421 EL-DSDHRPVVMKL 459
+L SDH P++ L
Sbjct: 200 DLHGSDHFPIITTL 213
>AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-PB,
isoform B protein.
Length = 653
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 124 VYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGR 264
V+ PD LSSD+ LLG+ + + + L C + S T P R
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYPRHR 274
>AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-PA,
isoform A protein.
Length = 804
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 124 VYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGR 264
V+ PD LSSD+ LLG+ + + + L C + S T P R
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYPRHR 274
>AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p
protein.
Length = 224
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 184 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAP 312
G S+ LA D+N K T T NG RLD++ LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,
isoform A protein.
Length = 224
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 184 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAP 312
G S+ LA D+N K T T NG RLD++ LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p
protein.
Length = 844
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 373 LLKNVTLRLHSIEVVSELDSDHRPVVMK--LGRAPD-SVPVTRTVVDWHTLGI 522
++KNV RL ++V+ SDHR V++ L + P S V + +HTL +
Sbjct: 267 MVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNL 319
>AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA
protein.
Length = 844
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 373 LLKNVTLRLHSIEVVSELDSDHRPVVMK--LGRAPD-SVPVTRTVVDWHTLGI 522
++KNV RL ++V+ SDHR V++ L + P S V + +HTL +
Sbjct: 267 MVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNL 319
>BT021444-1|AAX33592.1| 667|Drosophila melanogaster GH02866p
protein.
Length = 667
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 481 PVTRTVVDWHTLGISLAESDPPSLPFNPDSIPSPQD 588
P + + D H + A + PPS P P++ PSP D
Sbjct: 453 PRSGRLSDLHAPPAAAAAASPPSPPVRPNAPPSPAD 488
>AY058634-1|AAL13863.1| 382|Drosophila melanogaster LD33276p
protein.
Length = 382
Score = 28.7 bits (61), Expect = 7.7
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 406 IEVVSELDSDHRPVVMKLGR------APDSVPVTRTVVDWHTLGISLAESDPPSLPFNPD 567
+E V E ++D++PV K + A PV D H + + L+ DPP N
Sbjct: 263 LESVDEYETDYKPVYEKKRQERLAESATGPKPVDHVEEDGHAVPLGLSLQDPPPHTGNSI 322
Query: 568 SIPSPQDTAEAIDI 609
+ +P E+ +I
Sbjct: 323 FLMAPSLVPESAEI 336
>AL109630-8|CAB51688.1| 382|Drosophila melanogaster EG:BACR7A4.17
protein.
Length = 382
Score = 28.7 bits (61), Expect = 7.7
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 406 IEVVSELDSDHRPVVMKLGR------APDSVPVTRTVVDWHTLGISLAESDPPSLPFNPD 567
+E V E ++D++PV K + A PV D H + + L+ DPP N
Sbjct: 263 LESVDEYETDYKPVYEKKRQERLAESATGPKPVDHVEEDGHAVPLGLSLQDPPPHTGNSI 322
Query: 568 SIPSPQDTAEAIDI 609
+ +P E+ +I
Sbjct: 323 FLMAPSLVPESAEI 336
>AE014298-131|AAF45570.1| 382|Drosophila melanogaster CG3704-PA
protein.
Length = 382
Score = 28.7 bits (61), Expect = 7.7
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 406 IEVVSELDSDHRPVVMKLGR------APDSVPVTRTVVDWHTLGISLAESDPPSLPFNPD 567
+E V E ++D++PV K + A PV D H + + L+ DPP N
Sbjct: 263 LESVDEYETDYKPVYEKKRQERLAESATGPKPVDHVEEDGHAVPLGLSLQDPPPHTGNSI 322
Query: 568 SIPSPQDTAEAIDI 609
+ +P E+ +I
Sbjct: 323 FLMAPSLVPESAEI 336
>AE013599-3350|AAF46812.1| 667|Drosophila melanogaster CG6758-PA
protein.
Length = 667
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 481 PVTRTVVDWHTLGISLAESDPPSLPFNPDSIPSPQD 588
P + + D H + A + PPS P P++ PSP D
Sbjct: 453 PRSGRLSDLHAPPAAAAAASPPSPPVRPNAPPSPAD 488
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,390,616
Number of Sequences: 53049
Number of extensions: 604082
Number of successful extensions: 1690
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1665
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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