Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30296
         (757 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    26   1.4  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.5  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   5.8  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   5.8  

>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +1

Query: 178 LLHSSVLCKTVLYETKSRSQYKKKE*FSYCIAFIAGFERGDRIKKIRN 321
           + H +V     +YE K   + +++  F+YC     G    +  KKIR+
Sbjct: 149 IYHGTVDSVAKIYEAKPEIKKQEESFFAYCAKKALGANGKEGYKKIRD 196


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 248 FFLYWLLLLVSYKTVLHNTELCRSVSTML 162
           F +  LL LVSY  + H+   CRS   +L
Sbjct: 900 FTIELLLKLVSYGFLFHDGAFCRSAFNLL 928



 Score = 25.0 bits (52), Expect = 2.5
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +2

Query: 665  NYASTYF--YLLLCYILSINLYIKNK**NFDY 754
            N A  YF  + +LC  L INL++     NFDY
Sbjct: 1399 NIAFPYFISFYVLCSFLIINLFVAVIMDNFDY 1430


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 314 SVTKIKPNTPHSAYHVARVQHIHTLHLC 397
           ++ +  P  PH   HVA  QH+   H C
Sbjct: 156 TIHRRSPGVPH---HVAEPQHLGATHSC 180


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 314 SVTKIKPNTPHSAYHVARVQHIHTLHLC 397
           ++ +  P  PH   HVA  QH+   H C
Sbjct: 156 TIHRRSPGVPH---HVAEPQHLGATHSC 180


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,149
Number of Sequences: 2352
Number of extensions: 11640
Number of successful extensions: 69
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)