Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30294
(749 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces ... 108 7e-25
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 31 0.13
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.18
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 30 0.40
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.54
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 29 0.94
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 29 0.94
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 27 2.2
SPBC1711.09c |||SNARE associated Golgi protein |Schizosaccharomy... 27 2.2
SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32 |Schi... 27 2.9
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 27 3.8
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 3.8
SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1 |Schizosa... 26 5.0
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 26 5.0
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 6.6
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 25 8.7
>SPAC16E8.07c |vph1||V-type ATPase subunit a|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 805
Score = 108 bits (260), Expect = 7e-25
Identities = 78/233 (33%), Positives = 114/233 (48%), Gaps = 31/233 (13%)
Frame = +2
Query: 143 VSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRYIEAEVHKDGVHIPAVKEA 322
+S LGE ++ F+DLNPDV AFQR FV E+RR + ER LRY+ +E+ +G+H+P
Sbjct: 1 MSALGELSTIHFKDLNPDVVAFQRSFVREIRRLTDTERLLRYLHSEIDLNGIHVPDHNLP 60
Query: 323 PRAPNPRE---IIDLEAHLEKTENEILELSHNAVNLKQNYLELTELRHVLEKTEAFF--- 484
P + E I D+ + + E + +L ++ L+ YL+ E +VL K +AFF
Sbjct: 61 PSYESVLESSTIEDIIERITRLEARVRQLVESSQLLEARYLQQLEFANVLTKADAFFSKS 120
Query: 485 ------------TAQEEIGMDSLTKSLI-------------SDETGQQAATRGRLGFVAG 589
T+ G D T LI S+ET Q T L FV+G
Sbjct: 121 GNTVDPLRNNYETSSIFSGEDDTTAPLIENALELGTTGTFDSEETSPQMNT--TLDFVSG 178
Query: 590 VVQRERVPAFERMLWRISRGNVFLRRAELDKPLEDPATGNEIYKTVFVAFFQG 748
++ + ER+LWR RGN+F+ + D L A NE KT+F+ G
Sbjct: 179 IIPTVKFQFLERILWRTLRGNLFIHQVRADDSLIHGAEKNE-EKTIFLVIAHG 230
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 31.5 bits (68), Expect = 0.13
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +2
Query: 263 RYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEI----LELSHNAVNLKQN 430
R++ V K + P+V A NP+ + LE LE +N++ LE + L++
Sbjct: 30 RFLATSVKKPNLKKPSVNSANETKNPK-LASLEFQLENLKNDLKRKELEFEREQIELQRK 88
Query: 431 YLELTELRHVLEKTEAFFTAQEEIGMDSLTKSLISDETGQQAATRGRL 574
E E ++ L+ Q E S K I + ++ AT+ ++
Sbjct: 89 LAEEHEQKNSLQLRLTLVEKQLEEQSTSYQKE-IEEVRNEKEATQVKI 135
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.1 bits (67), Expect = 0.18
Identities = 22/103 (21%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +2
Query: 182 DLNPDVNAFQRKFVNEVR-RCDEMERKLRYIEA-EVHKDGVHIPAVKEAPRAPNPREIID 355
+L D+ QR N++ + E++ +L+++E + + I A K+ + P+ E+
Sbjct: 889 ELKQDIT-LQRTVRNQLEIQTTELKERLKFMEERQENLQSKLIAANKDTTQNPDNVEVEA 947
Query: 356 LEAHLEKTENEILELSHNAVNLKQNYLELTELRHVLEKTEAFF 484
+ LE+T+ ++ N++Q YL + ++ +T F
Sbjct: 948 ISIELERTKEKLRMAELEKSNIQQKYLASEKTLEMMNETHEQF 990
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.9 bits (64), Expect = 0.40
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 131 AYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRYIEAEVHK-DGV 298
A T++S + +A ++ FR+L+ + F+RK C MER+ + E+ K DGV
Sbjct: 934 ALTTISSMNQAVNMNFRELDKSIQEFKRK-------CQSMEREFK---TELRKLDGV 980
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.5 bits (63), Expect = 0.54
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 3/157 (1%)
Frame = -3
Query: 609 TRSRWTTPATNPRRPRVAAC*PVSSDIKDLVKESMPISSCAVKKASVFSRTCLNSVNS-R 433
T S TT AT+ +A SS + S P+SS A+ S T L SVNS
Sbjct: 256 TSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTT 315
Query: 432 *FCFKLTALCDSSRISFSVFSKCASKSMISL-GLGARGASLTAGMWTPSLCTSASMYRSL 256
T L S + + + +S + S+ A AS T S +++ L
Sbjct: 316 TTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPL 375
Query: 255 RSISSQRRTSLTNF-LWKAFTSGFKSLNCTLPASPSS 148
S++S TS ++ L A ++ S++ T P+ +S
Sbjct: 376 TSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTS 412
Score = 27.9 bits (59), Expect = 1.6
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = -3
Query: 414 TALCDSSRISFSVFSKCASKSMISLGL---GARGASLTAGMWTPSLCTSASMYRSLRSIS 244
++L SS ++ S + S S S L A +SL + T S S+S+ S + S
Sbjct: 83 SSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASS 142
Query: 243 SQRRTSLTNFLWKAFTSGFKSLNCTLPASPSS 148
S +SL + + + S N T A+P+S
Sbjct: 143 SITSSSLASSSTTSSSLASSSTNSTTSATPTS 174
Score = 27.1 bits (57), Expect = 2.9
Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 7/176 (3%)
Frame = -3
Query: 630 SIRSNAGTRSRWT--TPATNPRRPRVAAC*P---VSSDIKDLVKESMPISSCAVKKASVF 466
S+ S + T + T T A + V++ P SS + S P+SS A+
Sbjct: 377 SVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSA 436
Query: 465 SRTCLNSVNSR*FCFKLTALCDSSRISFSVFSKCASKSMISLGLGARGASLTAGMWTPSL 286
S T L+SVNS TA SS SV S A+ + + + T+ TP
Sbjct: 437 SSTPLSSVNS------TTATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLT 490
Query: 285 CTSASMYRSLRSISSQRRTSLTNFLWKAFTSGFKSLNCT--LPASPSSETEV*AAS 124
+++ S S SS TS + + +S S N + LP S S T + +A+
Sbjct: 491 SVNST---SATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSAN 543
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 28.7 bits (61), Expect = 0.94
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = -3
Query: 372 SKCASKSMISLGLGARGASLTAGMWTPSLCTSASMYRSLRSISSQRRT-SLTNFLWKAFT 196
S +S S S + + +S T + +S+++ S+ SI++ T + L + T
Sbjct: 931 SLTSSVSTASSYIASSASSNTLSTEPKTFSSSSTLSESISSINTNSLTVKPESSLSSSTT 990
Query: 195 SGFKSLNCTLPASPSSETEV*AAS 124
SG S + T+P+S SE+ +AS
Sbjct: 991 SGLTSSSSTIPSSTRSESNSESAS 1014
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 28.7 bits (61), Expect = 0.94
Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = -2
Query: 280 LGLDVPEFAFHFIAT-AHLIN 221
LG +PEFA+HF+ T + L+N
Sbjct: 383 LGFQIPEFAYHFLQTCSRLVN 403
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 273 SMYRSLRSISSQRRTSLTNFLWKAFTSG 190
SMY+ L S+ Q LTN +W+A G
Sbjct: 467 SMYKVLHSLVFQNELGLTNTVWEAAHGG 494
>SPBC1711.09c |||SNARE associated Golgi protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 270
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +2
Query: 296 VHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYLELTELRHVL 463
V A+K + + D+ HLE + ++L H +QN + +E +H+L
Sbjct: 211 VRYKAIKNSTLEDSTNSTSDVLNHLESQPTDSIDLRHLEQTSEQNETDNSERKHLL 266
>SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 749
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 282 TSASMYRSL-RSISSQRRTSLTNFLWKAFTSGFKSLNCTLPASPSS 148
+SAS YRS + S+ T+ ++F + TSG + N P+S +S
Sbjct: 657 SSASSYRSYSQRASTPAVTAKSSFHYATPTSGLSNFNSVTPSSSAS 702
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 3.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 290 DGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQN 430
D I + EA RE+I+ E H K E+E L L N LK++
Sbjct: 725 DSSMILSNSEAVSDEQERELIESEKHRMKLESENLHLQANIELLKKD 771
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +2
Query: 347 IIDLEAHLEKTENEILELSHNAVNLKQNYLELTELRHVLEKTEAFFTAQEEIGMDSLTKS 526
++ +E E + + E S + + + E E V+EKTE E DS + S
Sbjct: 153 VVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSS 212
Query: 527 LISDETG 547
S E+G
Sbjct: 213 DSSSESG 219
>SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +2
Query: 497 EIGMDSLTKSLISDETGQQAATRGRLGFVAGVVQRERVPAFERMLWRISRGNVFLRRAEL 676
++G D++T+ L++ + + R +LG Q+E+V +L + NV R +
Sbjct: 150 KLGRDTVTRELLAIKIIPKTERRPKLGRANASSQKEKVRREIAILKKCVHPNVVRLREVI 209
Query: 677 DKP 685
D P
Sbjct: 210 DDP 212
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 304 NVDTIFVHLGLDVPEFAFHFIATAHLINEFPLESIYV 194
N D +F+H D P + ++ A + FP +S Y+
Sbjct: 25 NHDQVFLHNLPDAPRYTKSYMHNAEIYKCFPTKSNYI 61
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.8 bits (54), Expect = 6.6
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +2
Query: 440 LTELRHVLEKTEAFFTAQEEIGMDSLTKSLISDETGQQAATRGRLGFVAGVVQRERVPAF 619
L +L + + + FT Q+ + + LTKSL +D+T Q+ +VA + A+
Sbjct: 549 LQQLGWLCHQQSSSFTNQD-LAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKYNKAYEAY 607
Query: 620 ERMLWRISRGNVF 658
++ ++R R F
Sbjct: 608 QQAVYRDGRNPTF 620
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 353 DLEAHLEKTENEILELSHNAVNLKQNYLELTELRHVLEKTEAFFTAQEEIGM 508
DLEA+L E E LE S ++ + NY LR+ + + F E + M
Sbjct: 76 DLEAYLSDLEREELEHSLEELDEENNY--KLHLRYSFSQLQDFDEENEAVHM 125
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,196,198
Number of Sequences: 5004
Number of extensions: 68505
Number of successful extensions: 247
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -