Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30294
(749 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48843| Best HMM Match : V_ATPase_I (HMM E-Value=0) 96 3e-42
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34) 36 0.027
SB_25425| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_53979| Best HMM Match : TetR_C (HMM E-Value=5.3) 34 0.14
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 34 0.14
SB_29623| Best HMM Match : GM_CSF (HMM E-Value=5) 34 0.14
SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 34 0.14
SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14) 34 0.14
SB_9562| Best HMM Match : TetR_C (HMM E-Value=4) 34 0.14
SB_46950| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 33 0.25
SB_45147| Best HMM Match : zf-CCHC (HMM E-Value=0.0051) 33 0.25
SB_56000| Best HMM Match : HSA (HMM E-Value=2.8) 32 0.43
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36) 32 0.57
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_56455| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033) 30 2.3
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_27052| Best HMM Match : Clathrin (HMM E-Value=3.3) 29 3.0
SB_53902| Best HMM Match : PSI (HMM E-Value=8.7) 29 4.0
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_34626| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 29 5.3
SB_42811| Best HMM Match : SRCR (HMM E-Value=0) 28 7.0
SB_25918| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 9.3
SB_50139| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 28 9.3
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 9.3
SB_32130| Best HMM Match : TSP_1 (HMM E-Value=0) 28 9.3
SB_1704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_48843| Best HMM Match : V_ATPase_I (HMM E-Value=0)
Length = 1128
Score = 96.3 bits (229), Expect(2) = 3e-42
Identities = 42/85 (49%), Positives = 63/85 (74%)
Frame = +2
Query: 494 EEIGMDSLTKSLISDETGQQAATRGRLGFVAGVVQRERVPAFERMLWRISRGNVFLRRAE 673
+E G T L+ +E +A +LGFV+GV+ RE+VP+FER+LWR RGNVF ++AE
Sbjct: 175 QEPGRTDDTVQLLGEEPSAASAAT-QLGFVSGVISREKVPSFERLLWRACRGNVFFKQAE 233
Query: 674 LDKPLEDPATGNEIYKTVFVAFFQG 748
+++ LEDP+TG++++K VF+ FFQG
Sbjct: 234 IEEALEDPSTGDQVHKCVFIIFFQG 258
Score = 94.3 bits (224), Expect(2) = 3e-42
Identities = 50/106 (47%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Frame = +2
Query: 86 SEEMALCQLFIQPEAAYTSVSELGE-AGSVQFRD-LNPDVNAFQRKFVNEVRRCDEMERK 259
++E+ + +F++ ++ Y S GE GS R LNPDVNAFQRKFVNEVRRC+EMERK
Sbjct: 72 AKELLIGCMFLR-DSVYFSAEFYGEFEGSYVIRQSLNPDVNAFQRKFVNEVRRCEEMERK 130
Query: 260 LRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILE 397
LR+++ E+ K + + E+ AP+PRE+IDLEA + +I E
Sbjct: 131 LRFLQKEIEKAEIAMVDTGESSEAPHPREMIDLEAEQHVHQQQIQE 176
>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
Length = 837
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 209 QRKFVNEVRRCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHL 370
Q K + +C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L A L
Sbjct: 277 QEKMXAQREKCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRAFL 332
>SB_25425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA---VKEAPRAPNPREIIDLEAHL 370
+C+ M+ L+Y+ + KDG+H PA V+ AP+P+++ L A L
Sbjct: 62 KCEFMQPSLKYLGHVIDKDGIH-PASDKVEAIKTAPSPQDVTQLRAFL 108
>SB_53979| Best HMM Match : TetR_C (HMM E-Value=5.3)
Length = 327
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHL 370
+C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L A L
Sbjct: 50 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRAFL 96
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHL 370
+C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L A L
Sbjct: 463 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRAFL 509
>SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1084
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHL 370
+C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L A L
Sbjct: 608 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRAFL 654
>SB_29623| Best HMM Match : GM_CSF (HMM E-Value=5)
Length = 296
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHL 370
+C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L A L
Sbjct: 29 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRAFL 75
>SB_23788| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1122
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHL 370
+C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L A L
Sbjct: 642 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRAFL 688
>SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1696
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHL 370
+C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L A L
Sbjct: 685 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRAFL 731
>SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14)
Length = 1217
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHL 370
+C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L A L
Sbjct: 415 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRAFL 461
>SB_9562| Best HMM Match : TetR_C (HMM E-Value=4)
Length = 242
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHL 370
+C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L A L
Sbjct: 80 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRAFL 126
>SB_46950| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 797
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHL 370
+C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L A L
Sbjct: 497 KCEFMQPPLKYLGHIIDKDGIHPTSDKVEAIKTAPSPQDVTQLRAFL 543
>SB_45147| Best HMM Match : zf-CCHC (HMM E-Value=0.0051)
Length = 522
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA---VKEAPRAPNPREIIDLEAHL 370
+C+ M+ L+Y+ + KDG+H PA ++ AP+P+++ L A L
Sbjct: 326 KCEFMQPSLKYLGHVIDKDGIH-PASDKLETIKTAPSPQDVTQLRAFL 372
>SB_56000| Best HMM Match : HSA (HMM E-Value=2.8)
Length = 410
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -3
Query: 390 ISFSVFSKCASKSMISLGLGARGASLTAGMWTPSLCTSASMY 265
+ F+ FS+ I+ L AR ++AG+WT C SA+ +
Sbjct: 346 LEFAQFSRKRVIEFIAFALWARDCCISAGLWTRDRCISAACF 387
>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2309
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHLEKTENE 388
+C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L + +E
Sbjct: 536 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRLTTSSSTSE 588
>SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36)
Length = 877
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 236 RCDEMERKLRYIEAEVHKDGVHIPA--VKEAPRAPNPREIIDLEAHLEKTENE 388
+C+ M+ L+Y+ + KDG+H + V+ AP+P+++ L + +E
Sbjct: 319 KCEFMQPSLKYLGHVIDKDGIHPTSDKVEAIKTAPSPQDVTQLRLTTSSSTSE 371
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 30.7 bits (66), Expect = 1.3
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Frame = +2
Query: 203 AFQRKFVNEVRRCDEMERKLRYIE---AEVHKDGVHI-PAVKEAPRAPNPREIIDLE-AH 367
A +++ +R+ +++R+L+ +E AEV KDGV I A++ + + + + +E
Sbjct: 720 AMKQRESKRLRQAQQIQRELQELEVKQAEVEKDGVVIEKAIRSGELSKSEEQKMMMEWFK 779
Query: 368 LEKTENEILELSHNAVNLKQNYLEL--------TELRHVLEKTEAFFTAQEEIGMDSLTK 523
+ +N ++ V + NY++L E+R +L K + T Q++I + TK
Sbjct: 780 IINRKNAMIRYESELV-IHANYIQLEDQQGRLEQEIRELLMKEAS--TEQDQIEIQLKTK 836
Query: 524 SLISDETGQQ 553
L+ D GQ+
Sbjct: 837 ELV-DIVGQR 845
>SB_56455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 206 FQRKFVNEVR-RCDEMERKLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTE 382
+ R + E R ++ +R+ R VH+D + + ++KE P P+ II + + E
Sbjct: 76 YTRLVIQESRDEYEKQQRQSRENLKRVHEDTLTVQSLKETPAIEPPKNIISQKLNQETNG 135
Query: 383 NEILELS 403
++ E++
Sbjct: 136 GQLREIT 142
>SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033)
Length = 311
Score = 29.9 bits (64), Expect = 2.3
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Frame = +2
Query: 143 VSELG-EAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL--RYIEAEVHKDGVHIPAV 313
++E+G E G+V+ R L +V + + + + R KL +Y E E KD + ++
Sbjct: 85 MAEIGVEKGNVE-RSLE-EVQSQNKDLMQQAERAKAELAKLSAKYEELEDEKDEMQ-ESL 141
Query: 314 KEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYLELTELR-HVLEKTEAFFTA 490
+ R + REI DLEA LE +E + +L + N + L ++L+ +++ E A
Sbjct: 142 SDTIREKS-REIRDLEADLEMSEQKYEDLKSSWNNTE---LVTSDLQGELMQAREEVIRA 197
Query: 491 QEEI 502
Q E+
Sbjct: 198 QSEV 201
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +2
Query: 194 DVNAFQRKFVNEVRRCDEMERKLR---YIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEA 364
D+ A Q + + E++R E R ++ E E D +H + + RE+ DL+
Sbjct: 1215 DIRAQQLEEIEELKRQIEHMRDVQNNYQKELEAKDDSLHY---LQDSKKEMMRELEDLKE 1271
Query: 365 HLEKTENEILELSHN-AVNLKQNYLELTELRHVLEKTE 475
L K ENE+ E + V NY + EL K E
Sbjct: 1272 MLHKKENELAEQAERIRVFESNNYGDAKELYETCNKLE 1309
>SB_27052| Best HMM Match : Clathrin (HMM E-Value=3.3)
Length = 203
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Frame = +2
Query: 245 EMERKLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTE----NEILEL-SHN 409
E+ +E H++ V + +E RE+++L H E E E++EL H
Sbjct: 14 ELVEHRELVELVEHRELVELVEHRELVELVEHRELVELVEHRELVELVEHRELVELVEHR 73
Query: 410 AVNLKQNYLELTELRHVLEKTEAFFTAQEEIGMDSLT 520
+ + +EL E R ++E E F + + ++S T
Sbjct: 74 ELVEHRELVELVEHRELVEHRELGFLSILDARVNSNT 110
Score = 28.7 bits (61), Expect = 5.3
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Frame = +2
Query: 266 YIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTE----NEILEL-SHNAVNLKQN 430
++E H++ V + +E RE+++L H E E E++EL H +
Sbjct: 12 HLELVEHRELVELVEHRELVELVEHRELVELVEHRELVELVEHRELVELVEHRELVELVE 71
Query: 431 YLELTELRHVLEKTE-AFFTAQEEIGMDSLTKSLISDET 544
+ EL E R ++E E E+G S+ + ++ T
Sbjct: 72 HRELVEHRELVELVEHRELVEHRELGFLSILDARVNSNT 110
>SB_53902| Best HMM Match : PSI (HMM E-Value=8.7)
Length = 139
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 630 CGVSREATSSCDVLNWTSRSKIL 698
CGV+R +SC V W+S K L
Sbjct: 82 CGVTRSQPASCSVAEWSSLQKCL 104
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +2
Query: 152 LGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDE--MERKLRYIEAEVHKDGVHIPAVKEAP 325
L +A +VQ +L D+ Q++ E+R+ +E +RKL +E +V +
Sbjct: 3032 LRQADNVQL-NLRKDLEDLQKE-KEELRKENENLKKRKLSIVE-KVKVTSSECAVASQVS 3088
Query: 326 RAPN-PREIIDLEAHLEKTENEILELSHNAVNLKQNYLE 439
+ P+ E + + +E +NEI+ L + A NL++ L+
Sbjct: 3089 QVPDLGSEPVAKASSMESAQNEIIMLENQAKNLRKQILK 3127
>SB_34626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 554 LVDQSRQILKTWSKNPCRFPPVR*RKLRSFQGHVSI 447
L +++ + K W + P RFP R + R F GH S+
Sbjct: 16 LREKTEKPQKGWIRKPFRFPNFRAKTERKFTGHDSL 51
>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
Length = 851
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 292 WCPHSRRQGSPPCSQPEGNH*LRGTFRENRKRNSRAVTQRGQLETKLSGVDRIE 453
W P SRR+ P ++P + GT R +R R R + R +L + V R+E
Sbjct: 593 WKPFSRRKARPSSARPRS---IFGTSRTSRHRRRRRIVARLRLRVHRTQV-RLE 642
>SB_42811| Best HMM Match : SRCR (HMM E-Value=0)
Length = 854
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 591 WSSASACPHSNGCCGVSREATSSCDVLNWT-SRSKIL 698
+S +C NG CG + + S D L+W +R +L
Sbjct: 141 YSGTGSCNFENGMCGYANDLLPSNDQLDWALTRPNVL 177
>SB_25918| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 238 LR*NGTQTPVHRGRGAQRWCPHSRRQGSPPCSQPE 342
LR T P+ G Q W P R+ P C PE
Sbjct: 51 LRAENTVNPLGEGEHLQTWVPPLRKGQGPLCPAPE 85
>SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1017
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/56 (26%), Positives = 22/56 (39%)
Frame = -2
Query: 727 HGLVDLVTRSRIFERLVQFSTSQEDVASRDTPQHPFECGHALALDHARNEPEAAAS 560
H D ++R + T +D+A+ D P ALA R PE + S
Sbjct: 434 HNAADAISRHPTGSTTPEMMTLPDDIATIDASNSPHPANAALASLRTREPPEESCS 489
>SB_50139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 537 TRLVNKRPLAAASGSLRAWSSASACPHSNGCCGVSREATSSCDVLNWTSRSKILLRVTRS 716
TR K P +G +SS S+C S C G +R T +C +S K + + +
Sbjct: 370 TRECGKAP-CPVNGGWSDYSSWSSCTKS--CGGGTRTRTRTCTNPKPSSGGKDCVGIAKQ 426
Query: 717 TRPC 728
TR C
Sbjct: 427 TREC 430
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 161 AGSVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRYIEAEVHKDGVHIPAV 313
+GS FR D ++RK++ C +RYIEA + G +P V
Sbjct: 348 SGSFYFR--TTDTAPYRRKYLTLDTDCFSRFTSIRYIEAAPYPGGPQLPKV 396
>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1229
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = -2
Query: 727 HGLVDLVTRSRIFERLVQFSTSQEDVASRDTPQHPFECGHALALDHARNEPEAAASGRLL 548
H D ++R + T +D+A+ D P ALA R PE + S +
Sbjct: 681 HKAADAISRHPTGSTTPEMMTLPDDIATIDASNSPHPANAALASLRTREPPEESCSYEID 740
Query: 547 TSLV 536
LV
Sbjct: 741 KELV 744
>SB_32130| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 446
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 537 TRLVNKRPLAAASGSLRAWSSASACPHSNGCCGVSREATSSCDVLNWTSRSKILLRVTRS 716
TR K P +G +SS S+C S C G +R T +C +S K + + +
Sbjct: 285 TRECGKAP-CPVNGGWSDYSSWSSCTKS--CGGGTRTRTRTCTNPKPSSGGKDCVGIAKQ 341
Query: 717 TRPC 728
TR C
Sbjct: 342 TREC 345
>SB_1704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = -2
Query: 727 HGLVDLVTRSRIFERLVQFSTSQEDVASRDTPQHPFECGHALALDHARNEPEAAAS 560
H D ++R + + T +D+A+ D P ALA R PE + S
Sbjct: 174 HKAADAISRHPMGSTTPEMMTLPDDIATIDASNSPHPANAALASLRTREPPEESCS 229
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,086,686
Number of Sequences: 59808
Number of extensions: 563350
Number of successful extensions: 1791
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1786
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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