Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30294
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...   360   e-101
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...   283   3e-78
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    29   0.12 
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    25   1.9  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    25   3.3  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   4.4  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    24   5.8  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            23   7.6  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            23   7.6  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            23   7.6  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            23   7.6  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            23   7.6  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score =  360 bits (885), Expect = e-101
 Identities = 175/229 (76%), Positives = 195/229 (85%), Gaps = 2/229 (0%)
 Frame = +2

Query: 68  MGAMFRSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDE 247
           M  MFRSEEMALCQ+FIQPEAAYTSVSELGE G+VQFRDLN DVNAFQRKFV+EVRRCDE
Sbjct: 1   MAMMFRSEEMALCQMFIQPEAAYTSVSELGETGAVQFRDLNADVNAFQRKFVSEVRRCDE 60

Query: 248 MERKLRYIEAEVHKDGVHIP--AVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNL 421
           MERKLRY+E EV KD V IP  +V + PRAPNPREIIDLEA LEKTENEILELS NAVNL
Sbjct: 61  MERKLRYVEGEVKKDSVQIPECSVDDWPRAPNPREIIDLEARLEKTENEILELSQNAVNL 120

Query: 422 KQNYLELTELRHVLEKTEAFFTAQEEIGMDSLTKSLISDETGQQAATRGRLGFVAGVVQR 601
           K NYLELTEL+HVLE+T++FF  QE I      KS +  E    A +RGRLGFVAGV+QR
Sbjct: 121 KSNYLELTELKHVLERTQSFFFEQEVIVSTDAAKSNLIAEDPTAAQSRGRLGFVAGVIQR 180

Query: 602 ERVPAFERMLWRISRGNVFLRRAELDKPLEDPATGNEIYKTVFVAFFQG 748
           E++P FERMLWRISRGN+FLR+ EL++PLEDPATGNEI+KTVFVAFFQG
Sbjct: 181 EKMPGFERMLWRISRGNIFLRQVELEEPLEDPATGNEIFKTVFVAFFQG 229


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score =  283 bits (695), Expect = 3e-78
 Identities = 142/229 (62%), Positives = 176/229 (76%), Gaps = 2/229 (0%)
 Frame = +2

Query: 68  MGAMFRSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDE 247
           MGAMFRSEEM++ QL IQPEAAY SV+ELGE G  QFRDLN D+N FQRK+ +E+RRC+E
Sbjct: 1   MGAMFRSEEMSMVQLLIQPEAAYQSVAELGELGIAQFRDLNTDINMFQRKYTSEIRRCEE 60

Query: 248 MERKLRYIEAEVHKDGVHIPAVKEA-PRAPNPREIIDLEAHLEKTENEILELSHNAVNLK 424
           MERK+ YI  E+ KD V IP + E  PR PN REIIDLEA LEKTENEI+ELS N   L 
Sbjct: 61  MERKIGYIRREIVKDSVAIPDMPEVIPRTPNSREIIDLEAQLEKTENEIVELSENNNALL 120

Query: 425 QNYLELTELRHVLEKTEAFFTAQEEIGMDSLTKSLISDETGQQAATRGR-LGFVAGVVQR 601
           QN++ELTEL+HVLEKT+ FF+ +  +      ++L  + TG +AA  G+ LGFVAGV+ R
Sbjct: 121 QNFMELTELKHVLEKTQVFFSDKSNV------QNL--EATGGEAANDGKPLGFVAGVISR 172

Query: 602 ERVPAFERMLWRISRGNVFLRRAELDKPLEDPATGNEIYKTVFVAFFQG 748
           ER+  FERMLWR+SRGN+FLR+A L++ L DP TG+ ++K VFVAFFQG
Sbjct: 173 ERIIGFERMLWRVSRGNIFLRQATLEESLVDPKTGDSVHKIVFVAFFQG 221


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 29.5 bits (63), Expect = 0.12
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +2

Query: 317 EAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYLELTELRHV 460
           E P   NP   I+ E H ++  N + EL +  V  K+   ELT L H+
Sbjct: 578 ELPEVDNPSNTIN-ERHDQRYANTLQELRNEMVMQKEGENELTVLTHL 624


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 249 WNANSGTSRPRCTKMVSTFPPSRKPPVLPTRGKSLT 356
           WNANSG +    T    +  P+++   +P R  + T
Sbjct: 110 WNANSGATNGATTGATGSNVPAQQNSSVPVRPSACT 145


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 249 WNANSGTSRPRCTKMVSTFPPSRKPPVLPTRGKSLT 356
           WNANSG +    T    +  P+++   +P R  + T
Sbjct: 110 WNANSGATNGATTGGTGSNVPAQQNSSVPVRPSACT 145


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 17/71 (23%), Positives = 28/71 (39%)
 Frame = +2

Query: 353 DLEAHLEKTENEILELSHNAVNLKQNYLELTELRHVLEKTEAFFTAQEEIGMDSLTKSLI 532
           D+EAHL + +     L +    L  +      L+ + E  +   T  E    D LT  L+
Sbjct: 113 DMEAHLFRMDELFSSLMNAGQELDSSLKVAMVLKSMPESYDHLTTTLETRSDDDLTMELV 172

Query: 533 SDETGQQAATR 565
             +   +A  R
Sbjct: 173 KSKLLDEAQKR 183


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +2

Query: 185 LNPDVNAFQRKFVNEVRRCDEMERKLR 265
           L+PD  A  R  V+ +RRC E ERK R
Sbjct: 388 LDPD-EASLRLEVDRLRRCIEEERKNR 413


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 310 GGNVDTIFVHLGLDVPEFAFHFIATAHLINEFPLESI 200
           GGNV T  V + + V   A     +  ++++FPL  I
Sbjct: 35  GGNVKTKKVEITISVDGVAIQEPRSLTIMHQFPLHKI 71


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 310 GGNVDTIFVHLGLDVPEFAFHFIATAHLINEFPLESI 200
           GGNV T  V + + V   A     +  ++++FPL  I
Sbjct: 35  GGNVKTKKVEITISVDGVAIQEPRSLTIMHQFPLHKI 71


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 310 GGNVDTIFVHLGLDVPEFAFHFIATAHLINEFPLESI 200
           GGNV T  V + + V   A     +  ++++FPL  I
Sbjct: 35  GGNVKTKKVEITISVDGVAIQEPRSLTIMHQFPLHKI 71


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 310 GGNVDTIFVHLGLDVPEFAFHFIATAHLINEFPLESI 200
           GGNV T  V + + V   A     +  ++++FPL  I
Sbjct: 35  GGNVKTKKVEITISVDGVAIQEPRSLTIMHQFPLHKI 71


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 310 GGNVDTIFVHLGLDVPEFAFHFIATAHLINEFPLESI 200
           GGNV T  V + + V   A     +  ++++FPL  I
Sbjct: 35  GGNVKTKKVEITISVDGVAIQEPRSLTIMHQFPLHKI 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,048
Number of Sequences: 2352
Number of extensions: 16547
Number of successful extensions: 45
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)