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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30292
         (770 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)                   71   1e-12
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)                 66   4e-11
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)                   55   6e-08
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)                       55   6e-08
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)               55   6e-08
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)                 55   6e-08
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)                 55   6e-08
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)                 55   6e-08
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)                 41   0.001
SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.45 
SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)              30   1.8  
SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   2.4  
SB_12240| Best HMM Match : IBB (HMM E-Value=9.5)                       29   3.1  
SB_56248| Best HMM Match : RVT_1 (HMM E-Value=8.6e-20)                 29   3.1  
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)                     29   4.2  
SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05)                   29   4.2  
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)                    29   4.2  
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.5  
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.3  

>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
          Length = 210

 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = +3

Query: 273 LGSTIKTEKDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKY 449
           L +  + E DK +I  LDV+++ P+EIS+K   G + ++ KH+  + EHGY + +F R Y
Sbjct: 29  LAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKS-EGEHGYETSEFHRSY 87

Query: 450 SLPEGAETANVVSELSADGILTVTA 524
           +LP+G + + V S ++ DG+L + A
Sbjct: 88  NLPDGVDVSTVSSRITGDGLLHIEA 112


>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
          Length = 185

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
 Frame = +3

Query: 294 EKDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAE 470
           + DKFQI  LDV+ F P+EI+ K   G + V      + +E G+ S++F R Y+LPEG +
Sbjct: 2   DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVD 60

Query: 471 TANVVSELSADGILTVTAPRKVIDDKGERVVPITK 575
            +++ + ++ DG+L V A +K      E   P TK
Sbjct: 61  ESSISTRIAEDGMLHVEALKKSPPATTENKAPATK 95



 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = +3

Query: 303 KFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYIS-RQFVRKYSLPEGAETAN 479
           KF + LDV  F P+E+ VK     + V A+ E   +EHG+ + RQF R + LP   +   
Sbjct: 99  KFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPREVDMDT 156

Query: 480 VVSELSADGILTVTAPRK 533
           +V  L  DG+L + A ++
Sbjct: 157 LVPRLGKDGVLYIEADKR 174


>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
          Length = 695

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +3

Query: 297 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAET 473
           ++K +I  LDV+ + P+EIS K   G V V+ +H   +   G+  ++F R ++LPEG E 
Sbjct: 5   ENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 63

Query: 474 ANVVSELSADGILTVTAPRKVIDDKGER 557
           +NV + +S  G L + A + + +  G +
Sbjct: 64  SNVKTRISNHGQLHIEAMKALPEPDGAK 91



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 24/86 (27%), Positives = 47/86 (54%)
 Frame = +3

Query: 276 GSTIKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSL 455
           G+  +++ DKF + +DV+ F P+ I V+     ++V A HE + + H Y +  F R++ L
Sbjct: 89  GAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFIL 147

Query: 456 PEGAETANVVSELSADGILTVTAPRK 533
           P   +  ++ + L  +G L   A ++
Sbjct: 148 PREVDMDSLTTRLDKEGKLHFEAKKR 173


>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
          Length = 424

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +3

Query: 297 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAET 473
           ++K +I  LDV+ + P+EIS K   G+V V+ +H   +   G+  ++F R ++LPEG E 
Sbjct: 4   ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62

Query: 474 ANVVSELSADGILTVTA 524
           +NV + +S  G L + A
Sbjct: 63  SNVKTRISNHGQLHIEA 79



 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +3

Query: 300 DKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAETA 476
           D+ +I  LDV+ + P+EIS K   G+V V+ +H   +   G+  ++F R ++LPEG E +
Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEAS 297

Query: 477 NVVSELSADGILTVTA 524
           NV + +S  G L + A
Sbjct: 298 NVKTRISNHGQLHIEA 313



 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 24/78 (30%), Positives = 41/78 (52%)
 Frame = +3

Query: 300 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAETAN 479
           DKF + +DV  F PD I V+     ++V A HE + + H Y +  F R++ LP   +  +
Sbjct: 97  DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155

Query: 480 VVSELSADGILTVTAPRK 533
           + + L  +G L   A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173



 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 24/78 (30%), Positives = 41/78 (52%)
 Frame = +3

Query: 300 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAETAN 479
           DKF + +DV  F PD I V+     ++V A HE + + H Y +  F R++ LP   +  +
Sbjct: 331 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 389

Query: 480 VVSELSADGILTVTAPRK 533
           + + L  +G L   A ++
Sbjct: 390 LTTRLDKEGKLHFEAKKR 407


>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 760

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +3

Query: 297 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAET 473
           ++K +I  LDV+ + P+EIS K   G+V V+ +H   +   G+  ++F R ++LPEG E 
Sbjct: 4   ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62

Query: 474 ANVVSELSADGILTVTA 524
           +NV + +S  G L + A
Sbjct: 63  SNVKTRISNHGQLHIEA 79



 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 24/78 (30%), Positives = 41/78 (52%)
 Frame = +3

Query: 300 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAETAN 479
           DKF + +DV  F PD I V+     ++V A HE + + H Y +  F R++ LP   +  +
Sbjct: 97  DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155

Query: 480 VVSELSADGILTVTAPRK 533
           + + L  +G L   A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173


>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
          Length = 189

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = +3

Query: 294 EKDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAE 470
           +K+  +I  LDV+ + P+EIS K   G V V+ +H   + E G+  ++F R ++LPEG +
Sbjct: 3   KKNTLEIAKLDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGID 61

Query: 471 TANVVSELSADGILTVTAPRKVI 539
             NV S +S  G L + A RK +
Sbjct: 62  PENVTSRISNHGHLHIEA-RKAL 83



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 25/83 (30%), Positives = 44/83 (53%)
 Frame = +3

Query: 288 KTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGA 467
           K ++DKF + +DV  F P+ I V+     ++V A HE + + H Y +  F R++ LP   
Sbjct: 92  KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREV 150

Query: 468 ETANVVSELSADGILTVTAPRKV 536
           +  ++ + L  +G L   A + V
Sbjct: 151 DMDSLTTRLDKEGKLHFEAKKSV 173


>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
          Length = 190

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +3

Query: 297 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAET 473
           ++K +I  LDV+ + P+EIS K   G+V V+ +H   +   G+  ++F R ++LPEG E 
Sbjct: 4   ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62

Query: 474 ANVVSELSADGILTVTA 524
           +NV + +S  G L + A
Sbjct: 63  SNVKTRISNHGQLHIEA 79



 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 24/78 (30%), Positives = 41/78 (52%)
 Frame = +3

Query: 300 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAETAN 479
           DKF + +DV  F PD I V+     ++V A HE + + H Y +  F R++ LP   +  +
Sbjct: 97  DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155

Query: 480 VVSELSADGILTVTAPRK 533
           + + L  +G L   A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173


>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
          Length = 190

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +3

Query: 297 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAET 473
           ++K +I  LDV+ + P+EIS K   G+V V+ +H   +   G+  ++F R ++LPEG E 
Sbjct: 4   ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62

Query: 474 ANVVSELSADGILTVTA 524
           +NV + +S  G L + A
Sbjct: 63  SNVKTRISNHGQLHIEA 79



 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 24/78 (30%), Positives = 41/78 (52%)
 Frame = +3

Query: 300 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAETAN 479
           DKF + +DV  F PD I V+     ++V A HE + + H Y +  F R++ LP   +  +
Sbjct: 97  DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155

Query: 480 VVSELSADGILTVTAPRK 533
           + + L  +G L   A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173


>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
          Length = 259

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +3

Query: 279 STIKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYI-SRQFVRKYSL 455
           S    +  KF + LDV  F P+E+ VK     + V A+ E   +EHG+  +RQF R + L
Sbjct: 19  SAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVL 76

Query: 456 PE 461
           P+
Sbjct: 77  PQ 78


>SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 163

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 285 IKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEH 416
           I  + D+F I  D  H   DE+ ++T E Y+  +  H ++ + H
Sbjct: 45  IHLDTDEFHIETDELHIDIDELHIETYELYIDTDELHTDRNEIH 88


>SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1146

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +3

Query: 315 NLDVQHFSPDEI--SVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEGAETANVV 485
           ++DV   S ++I  ++  A+G +  E+ H    DE+G I   F++  S  E A  A  V
Sbjct: 94  DVDVSSISGEDILRAIDAADGDISGESGHVTDSDENGDIDSSFIKLESSSESAPLATKV 152


>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
          Length = 3397

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 384  EAKHEEKQDEHGYISRQFVRKYSLPEGAETANVVSELSADGILT 515
            E K+EE  DEHG I R+  +        E   V   ++ DG+ T
Sbjct: 1187 ETKYEEYVDEHGQIIRRTTKVKHTAVKQERTTVTKTVTRDGVTT 1230


>SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1295

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 258 TPCAAKVGSSRELSTASSCLLRSRPELAASRSPD 157
           TP +A   SS  L   S+CL+ S+P L   +S D
Sbjct: 835 TPSSATSTSSLSLKATSTCLVESKPPLTKQKSLD 868


>SB_12240| Best HMM Match : IBB (HMM E-Value=9.5)
          Length = 161

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = +3

Query: 426 SRQFVRKYSLPEGAETANVVSELSADGILTVTAPRKVIDDKGERVVPIT-KTGPVRKESA 602
           +R+ + K + P   ET     E  A G    T P+ V+D+  ERV P+T  TG  R E +
Sbjct: 35  NRRHILKTNEPALQETDTPFQEPEASG--EDTPPQIVLDESNERVRPVTMPTGLRRSERS 92

Query: 603 ESKNSKEADPGFCEDGKSEMQ*RLV 677
           +       D      G  E+Q  LV
Sbjct: 93  KQVPVWHEDYEVTMRGALEVQRDLV 117


>SB_56248| Best HMM Match : RVT_1 (HMM E-Value=8.6e-20)
          Length = 1193

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +3

Query: 426  SRQFVRKYSLPEGAETANVVSELSADGILTVTAPRKVIDDKGERVVPIT-KTGPVRKESA 602
            +R+ + K + P   ET     E  A G    T P+ V+D+  ERV P+T  TG  R E +
Sbjct: 1109 NRRHILKTNEPALRETDTPFQEPEASG--EDTPPQIVLDESNERVRPVTMPTGLRRSERS 1166

Query: 603  ESKNS 617
            +   S
Sbjct: 1167 KQCRS 1171


>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 1023

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +3

Query: 303 KFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRKYSLPEG 464
           K +IN D +     ++ + + + Y+   AK E +  ++G ++    +KY  PEG
Sbjct: 730 KLRINADEKEEQEQKVPISSDKRYINGHAKDENETVKNGNMNLDNSQKYFSPEG 783


>SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05)
          Length = 493

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
 Frame = +3

Query: 129 KKQRDNKLVDQDFGMPLTPDDFLTNMMTPWIVHDYFRPWRHTASLARDLGSTIKTEKDKF 308
           KK+R++K     FG  L+P+ F   +     V     P R    ++ D  S +  +K K 
Sbjct: 140 KKRRESKSKRVSFGPMLSPEQFDKELPPATPVRRGATPRR----VSSDRKSLLMDQKKKH 195

Query: 309 QINLD-VQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYISRQFVRK---YSLPEGAETA 476
            +N + ++    +E + KT E   V E K EE ++E    + + V +     LPE   T 
Sbjct: 196 IVNENRIEELPEEEATPKTPE--EVEENKIEEPEEEAISKTPEEVTENKIKELPEEEATP 253

Query: 477 NVVSELSADGILTVTAPR 530
             V E        ++AP+
Sbjct: 254 KEVKETPRRSSRRLSAPQ 271


>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
          Length = 436

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +3

Query: 384 EAKHEEKQDEHGYISRQFVRKYSL 455
           + KHEE++D HGY+  +   +++L
Sbjct: 70  QVKHEEREDRHGYLKDKVTLQHAL 93


>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1926

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 537 IDDKGERVVPITKTGPVRKESAESKNSKEADPG 635
           ID K + V   +K+  V K ++  K+SKE DPG
Sbjct: 763 IDAKSKDVRSKSKSKSVEKRTSTEKSSKEPDPG 795


>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2870

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -3

Query: 264  PKTPCA--AKVGSSRELSTA-SSCLLRSRPELAASRSPDPQVCCLAAF 130
            PK  C+   KVGS+   S   SSCLL  +P         P  CCLAAF
Sbjct: 1886 PKKCCSKPTKVGSAPTSSQCPSSCLLACQPSC-------PMECCLAAF 1926


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,078,426
Number of Sequences: 59808
Number of extensions: 454238
Number of successful extensions: 1458
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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