Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30291
         (762 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome ass...    29   9.2  
BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p pro...    29   9.2  
AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA...    29   9.2  

>U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome
           assembly protein NAP-1 protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 376 ENEADVSSDDEAPPANDKKSANL 444
           ENE D   DD+APP    KSA +
Sbjct: 337 ENEEDEYDDDDAPPPKGPKSAGI 359


>BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p
           protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 376 ENEADVSSDDEAPPANDKKSANL 444
           ENE D   DD+APP    KSA +
Sbjct: 337 ENEEDEYDDDDAPPPKGPKSAGI 359


>AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA
           protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 376 ENEADVSSDDEAPPANDKKSANL 444
           ENE D   DD+APP    KSA +
Sbjct: 337 ENEEDEYDDDDAPPPKGPKSAGI 359


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.300    0.123    0.327 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,512,711
Number of Sequences: 53049
Number of extensions: 340489
Number of successful extensions: 532
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.6 bits)