Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30291
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical ... 29 3.6
AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying de... 28 6.3
AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying de... 28 6.3
AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying de... 28 6.3
AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying de... 28 6.3
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 28 6.3
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 8.3
AC024214-16|ABA00187.1| 343|Caenorhabditis elegans Hypothetical... 28 8.3
>AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical
protein Y116F11B.6 protein.
Length = 345
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 521 VMNLQITKEKKHLN---KHLKVRKINKTLQMAKILKNPVKMKTPVKNLKRL*IKTVKHSH 691
+ N +I + + +N +H + KI + I K VK+K KNLK K +K +H
Sbjct: 196 INNNEIIRNYQEVNGCLEHFENDKIRIIEDVENIKKQDVKLKKIEKNLKES-RKELKEAH 254
Query: 692 QMHLQR 709
Q +L R
Sbjct: 255 QEYLNR 260
>AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying
defective protein 4,isoform f protein.
Length = 470
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 358 PVVHKTENEADVSSDDEAPPAND 426
P++ K N ADV++ D PP ND
Sbjct: 435 PILPKVSNPADVTNFDNYPPDND 457
>AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying
defective protein 4,isoform c protein.
Length = 749
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 358 PVVHKTENEADVSSDDEAPPAND 426
P++ K N ADV++ D PP ND
Sbjct: 714 PILPKVSNPADVTNFDNYPPDND 736
>AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying
defective protein 4,isoform e protein.
Length = 743
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 358 PVVHKTENEADVSSDDEAPPAND 426
P++ K N ADV++ D PP ND
Sbjct: 708 PILPKVSNPADVTNFDNYPPDND 730
>AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying
defective protein 4,isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 358 PVVHKTENEADVSSDDEAPPAND 426
P++ K N ADV++ D PP ND
Sbjct: 702 PILPKVSNPADVTNFDNYPPDND 724
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 358 PVVHKTENEADVSSDDEAPPAND 426
P++ K N ADV++ D PP ND
Sbjct: 745 PILPKVSNPADVTNFDNYPPDND 767
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 229 TLLNENGMNDSSDDEDVPDKSIXXXXXXXXXXXXNVLKINNTLPVVHKTENE-ADVSSDD 405
T+++ G ND+S+ ED P+KS I + LPV T+ E A+ D
Sbjct: 1100 TVVDHAGQNDTSEVEDAPEKSAGGTVIEKF-----TSMIESILPVQAPTQPENAESHIDQ 1154
Query: 406 EAPPAND-KKSANLPD 450
E A++ K N P+
Sbjct: 1155 ETGGASEIKDDQNQPE 1170
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 229 TLLNENGMNDSSDDEDVPDKSIXXXXXXXXXXXXNVLKINNTLPVVHKTENE-ADVSSDD 405
T+++ G ND+S+ ED P+KS I + LPV T+ E A+ D
Sbjct: 1100 TVVDHAGQNDTSEVEDAPEKSAGGTVIEKF-----TSMIESILPVQAPTQPENAESHIDQ 1154
Query: 406 EAPPAND-KKSANLPD 450
E A++ K N P+
Sbjct: 1155 ETGGASEIKDDQNQPE 1170
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 229 TLLNENGMNDSSDDEDVPDKSIXXXXXXXXXXXXNVLKINNTLPVVHKTENE-ADVSSDD 405
T+++ G ND+S+ ED P+KS I + LPV T+ E A+ D
Sbjct: 1100 TVVDHAGQNDTSEVEDAPEKSAGGTVIEKF-----TSMIESILPVQAPTQPENAESHIDQ 1154
Query: 406 EAPPAND-KKSANLPD 450
E A++ K N P+
Sbjct: 1155 ETGGASEIKDDQNQPE 1170
>AC024214-16|ABA00187.1| 343|Caenorhabditis elegans Hypothetical
protein Y77E11A.16 protein.
Length = 343
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 432 LLVICRWGFIVTRHICFVFSFMHDRQCIIYFK 337
L+ C W +HICF+FS + Y K
Sbjct: 142 LMCFCLWLVAFAQHICFIFSESPPDEITAYLK 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.300 0.123 0.327
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,438,585
Number of Sequences: 27780
Number of extensions: 188607
Number of successful extensions: 356
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.6 bits)
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