Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30289
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    23   2.9  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    23   2.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   5.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   6.8  

>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -2

Query: 601 DLFLNSHGHILSLLEELSKTHSSVEQLL 518
           DLF N H HI ++ + +  T+  + + +
Sbjct: 50  DLFDNVHNHIQNIFKIIKSTNEKITRYI 77


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -2

Query: 601 DLFLNSHGHILSLLEELSKTHSSVEQLL 518
           DLF N H HI ++ + +  T+  + + +
Sbjct: 33  DLFDNVHNHIQNIFKIIKSTNEKITRYI 60


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = -1

Query: 242 QSGSHHPFCQTS*RHAQADGSEDRTRHQDKPH 147
           Q  +H+       RH+    +++  +H D+ H
Sbjct: 420 QDNNHYNHNHNQARHSSKSDNQNNNQHNDQAH 451


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 608 IYCGVRGHLDKLDPLQNHC-LREGIHSTH 691
           +YCG+R  L  L+ +Q    + EGI   H
Sbjct: 686 LYCGIRAGLSWLERIQIALDVLEGIRYLH 714


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 608 IYCGVRGHLDKLDPLQNHC-LREGIHSTH 691
           +YCG+R  L  L+ +Q    + EGI   H
Sbjct: 724 LYCGIRAGLSWLERIQIALDVLEGIRYLH 752


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 716 EKTLVASFDVLSEFLLEGSDFGGGPACRGD 627
           E+TL+   DVL E      D+      RGD
Sbjct: 226 EETLIKISDVLEETFYNNGDYIIRQGARGD 255


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 4/8 (50%), Positives = 8/8 (100%)
 Frame = -2

Query: 724 IVERRPWW 701
           ++++RPWW
Sbjct: 70  VIDKRPWW 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,785
Number of Sequences: 438
Number of extensions: 4900
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)