Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30289
(728 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial... 365 e-101
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati... 75 4e-14
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati... 75 4e-14
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP... 75 4e-14
At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putati... 55 4e-08
At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit... 54 1e-07
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati... 40 0.002
At3g12360.1 68416.m01541 ankyrin repeat family protein contains ... 34 0.084
At2g37050.1 68415.m04546 leucine-rich repeat family protein / pr... 29 3.2
At5g13150.1 68418.m01506 exocyst subunit EXO70 family protein le... 28 5.5
At1g79010.1 68414.m09213 NADH-ubiquinone oxidoreductase 23 kDa s... 28 5.5
At1g43620.2 68414.m05008 UDP-glucose:sterol glucosyltransferase,... 28 5.5
At1g43620.1 68414.m05007 UDP-glucose:sterol glucosyltransferase,... 28 5.5
At1g16700.1 68414.m02000 NADH-ubiquinone oxidoreductase 23 kDa s... 28 5.5
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 27 9.6
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 27 9.6
>At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial,
putative very strong similarity to SP|P23413 ATP synthase
alpha chain, mitochondrial (EC 3.6.3.14) {Brassica
campestris}; contains Pfam profiles PF00006: ATP synthase
alpha/beta family nucleotide-binding domain, PF00306: ATP
synthase ab C terminal, PF02874: ATP synthase alpha/beta
family beta-barrel domain
Length = 777
Score = 365 bits (898), Expect = e-101
Identities = 178/209 (85%), Positives = 189/209 (90%)
Frame = +2
Query: 17 YSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 196
YSGCAMGE+FRDNG HALIIYDDLSKQAVAYRQMSLLLRRPPGREA+PGDVFYLHSRLLE
Sbjct: 521 YSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLE 580
Query: 197 RAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINV 376
RAAK SD+ G GSLTALPVIETQAGDVSAYIPTNVISITDGQI LETELFY+GIRPAINV
Sbjct: 581 RAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINV 640
Query: 377 GLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTEL 556
GLSVSRVGSAAQ KAMKQV GS KLELAQYREVAAFAQFGSDLDAATQ LLNRG RLTE+
Sbjct: 641 GLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEV 700
Query: 557 LKQGQYVPMAIEEQVAIIYCGVRGHLDKL 643
KQ QY P+ IE+Q+ +IY V G D++
Sbjct: 701 PKQPQYAPLPIEKQILVIYAAVNGFCDRM 729
>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 75.4 bits (177), Expect = 4e-14
Identities = 42/123 (34%), Positives = 69/123 (56%)
Frame = +2
Query: 56 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGS 235
GKH L+I D+S A A R++S PGR YPG ++ + + ERA ++ + GS
Sbjct: 267 GKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRK--GS 324
Query: 236 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT 415
+T +P++ D++ P IT+GQI+++ +L + I P INV S+SR+ +A
Sbjct: 325 ITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIG 384
Query: 416 KAM 424
+ M
Sbjct: 385 EGM 387
>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 75.4 bits (177), Expect = 4e-14
Identities = 42/123 (34%), Positives = 69/123 (56%)
Frame = +2
Query: 56 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGS 235
GKH L+I D+S A A R++S PGR YPG ++ + + ERA ++ + GS
Sbjct: 267 GKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRK--GS 324
Query: 236 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT 415
+T +P++ D++ P IT+GQI+++ +L + I P INV S+SR+ +A
Sbjct: 325 ITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIG 384
Query: 416 KAM 424
+ M
Sbjct: 385 EGM 387
>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
B subunit / vacuolar proton pump B subunit / V-ATPase 57
kDa subunit identical to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}
Length = 486
Score = 75.4 bits (177), Expect = 4e-14
Identities = 42/123 (34%), Positives = 69/123 (56%)
Frame = +2
Query: 56 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDKMGGGS 235
GKH L+I D+S A A R++S PGR YPG ++ + + ERA ++ + GS
Sbjct: 266 GKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRK--GS 323
Query: 236 LTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT 415
+T +P++ D++ P IT+GQI+++ +L + I P INV S+SR+ +A
Sbjct: 324 ITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIG 383
Query: 416 KAM 424
+ M
Sbjct: 384 EGM 386
>At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 485
Score = 55.2 bits (127), Expect = 4e-08
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Frame = +2
Query: 56 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH-SRLLERAAKMSDKMGGG 232
GKH L+I D+S A A R R + + V+Y + + ERA ++ + G
Sbjct: 267 GKHVLVILTDMSSYADALR---FCCSRRSSWKTWISGVYYTDLATIYERAGRIEGRKG-- 321
Query: 233 SLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQ 412
S+T +P++ D++ P IT+GQI+++ +L + I P INV S+SR+ +A
Sbjct: 322 SITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAI 381
Query: 413 TKAM 424
+ M
Sbjct: 382 GEGM 385
>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
/ V-ATPase A subunit / vacuolar proton pump alpha
subunit / V-ATPase 69 kDa subunit identical to SP|O23654
Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
(V-ATPase A subunit) (Vacuolar proton pump alpha
subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
thaliana}
Length = 623
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Frame = +2
Query: 17 YSGCAMGEFFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLE 196
Y+G + E+FRD G + ++ D S+ A A R++S L P YP + + E
Sbjct: 331 YTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYE 390
Query: 197 RAAKMSDKMG---GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPA 367
RA K+ G GS+T + + GD S + + +SI L+ +L + P+
Sbjct: 391 RAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPS 450
Query: 368 INVGLSVSRVGSAAQT 415
+N +S S+ +A ++
Sbjct: 451 VNWLISYSKYSTALES 466
>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 330
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 56 GKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYL 178
GKH L+I D+S A A R++S PGR YPG + +
Sbjct: 267 GKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYIIQI 307
>At3g12360.1 68416.m01541 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 590
Score = 34.3 bits (75), Expect = 0.084
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Frame = +2
Query: 362 PAINVGLSVSRVGSAAQTKAMKQVAG---SMKLELAQYR-EVAAFAQFGSDLDAATQQLL 529
PA+ + S R+ A + K +KQV G +L LA R ++AA Q D+++ + +L
Sbjct: 46 PALVLSNSGKRMDQAGKKKYVKQVTGRHNDTELHLAAQRGDLAAVQQILKDINSQMEGIL 105
Query: 530 NRGMRLTELLKQGQYVPMAIEE--QVAIIYCGVRGHLDKLDPLQNHCLREGI 679
+ E+ + + + E + A+ +GHLD + L + RE I
Sbjct: 106 SGEEFDAEVAEIRASIVNEVNELGETALFTAADKGHLDVVKELLKYSSRESI 157
>At2g37050.1 68415.m04546 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 934
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +2
Query: 302 ISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA-AQTKAMKQVAGSMKLELAQ----Y 466
I I++ I EL + P ++V LS + G T ++Q++GSM + Y
Sbjct: 129 IVISETYIIETAELVFLASSPTVSVCLSNATTGQPFISTLELRQLSGSMYGSMLSEDRFY 188
Query: 467 REVAAFAQFGSDLDAATQ 520
VAA FG++ +A+ +
Sbjct: 189 LSVAARINFGAESEASVR 206
>At5g13150.1 68418.m01506 exocyst subunit EXO70 family protein
leucine zipper-containing protein - Lycopersicon
esculentum, EMBL:Z12127 contains Pfam domain PF03081:
Exo70 exocyst complex subunit;
Length = 653
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = -1
Query: 248 VKQSGSHHPFCQTS*RHAQADGSEDRTRHQDKPHGRGDDAAVETSDGRL 102
+++SG+HH ++S H + +H D+ H ++ E+S+ L
Sbjct: 1 MEKSGNHHHANESSENHDHKSEDHENKQHSDELHSSTPESQSESSEHSL 49
>At1g79010.1 68414.m09213 NADH-ubiquinone oxidoreductase 23 kDa
subunit, mitochondrial (TYKY) identical to SP|Q42599
NADH-ubiquinone oxidoreductase 23 kDa subunit,
mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3)
(Complex I-23KD) (CI-23KD) (Complex I- 28.5KD)
(CI-28.5KD) {Arabidopsis thaliana}
Length = 222
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 346 LQRYPTSHQRRSVCIACRIC 405
L+RYPT +R CIAC++C
Sbjct: 113 LRRYPTGEER---CIACKLC 129
>At1g43620.2 68414.m05008 UDP-glucose:sterol glucosyltransferase,
putative similar to UDP-glucose:sterol
glucosyltransferase [Arabidopsis thaliana] GI:2462931;
contains Pfam profile: PF03033 glycosyltransferase
family 28 N-terminal domain
Length = 615
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 260 TQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPA-INVG-LSVSRVGSAAQTKAMKQV 433
T A + A PT ++ Q F ++ KG+ PA I + LSV + S+ + +V
Sbjct: 487 TTATGLKAGCPTTIVPFFGDQFFWGDRIYEKGLGPAPIPIAQLSVENLSSSIRFMLQPEV 546
Query: 434 AGSMKLELAQYRE 472
S +ELA+ E
Sbjct: 547 K-SQVMELAKVLE 558
>At1g43620.1 68414.m05007 UDP-glucose:sterol glucosyltransferase,
putative similar to UDP-glucose:sterol
glucosyltransferase [Arabidopsis thaliana] GI:2462931;
contains Pfam profile: PF03033 glycosyltransferase
family 28 N-terminal domain
Length = 615
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 260 TQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPA-INVG-LSVSRVGSAAQTKAMKQV 433
T A + A PT ++ Q F ++ KG+ PA I + LSV + S+ + +V
Sbjct: 487 TTATGLKAGCPTTIVPFFGDQFFWGDRIYEKGLGPAPIPIAQLSVENLSSSIRFMLQPEV 546
Query: 434 AGSMKLELAQYRE 472
S +ELA+ E
Sbjct: 547 K-SQVMELAKVLE 558
>At1g16700.1 68414.m02000 NADH-ubiquinone oxidoreductase 23 kDa
subunit, mitochondrial, putative very strong similarity
to SP|Q42599 NADH-ubiquinone oxidoreductase 23 kDa
subunit, mitochondrial precursor (EC 1.6.5.3) (EC
1.6.99.3) (Complex I-23KD) (CI-23KD) (Complex I- 28.5KD)
(CI-28.5KD) {Arabidopsis thaliana}; contains Pfam
profile PF00037: iron-sulfur cluster-binding protein
Length = 222
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 346 LQRYPTSHQRRSVCIACRIC 405
L+RYPT +R CIAC++C
Sbjct: 113 LRRYPTGEER---CIACKLC 129
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 474 SQLLPSSVLTWMP-LHSSCSTEECVLLSSSSKDNMCPWLLR 593
S L S +LT + L SSC E V+ +++ K+ + P LLR
Sbjct: 327 SMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLR 367
>At4g14760.1 68417.m02271 M protein repeat-containing protein
contains Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/41 (21%), Positives = 23/41 (56%)
Frame = -2
Query: 646 VQLVEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVEQ 524
++L+E AD+ D++ ++ L+EEL + + ++ +
Sbjct: 9 IKLIEADADSFARRADMYFKKRPELMKLVEELYRAYRALAE 49
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,032,509
Number of Sequences: 28952
Number of extensions: 362417
Number of successful extensions: 1143
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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