Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30285
         (476 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   2.5  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   3.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   4.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.7  

>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = +2

Query: 11  IVFFYKISIINNVSTK--FLDE 70
           +V F+K+ + NN+S K  FL E
Sbjct: 71  VVSFHKLKLTNNISDKHGFLKE 92


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 11  IVFFYKISIINNVSTK 58
           +V F+K+ + NN+S K
Sbjct: 71  VVSFHKLKLTNNISDK 86


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 99  SFYTSLYNMYSSRN 58
           SF+T+L NM+  RN
Sbjct: 332 SFFTALKNMHDIRN 345


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 349 VLCAHSFFCAY 381
           +LC + FFCA+
Sbjct: 163 LLCIYHFFCAF 173



 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/17 (35%), Positives = 8/17 (47%)
 Frame = +1

Query: 331 FYCYEMVLCAHSFFCAY 381
           FYC  ++   H   C Y
Sbjct: 85  FYCPFIIFTVHFLLCTY 101


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 5    FYIVFFYKIS 34
            FY+V FYK+S
Sbjct: 1030 FYLVKFYKVS 1039


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 5   FYIVFFYKIS 34
           FY+V FYK+S
Sbjct: 311 FYLVKFYKVS 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,777
Number of Sequences: 336
Number of extensions: 1662
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)