Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30285
         (476 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   2.4  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   4.1  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       22   9.6  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       22   9.6  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 312 YSKPCFVSIYYYCYFYIA 259
           ++ PCFV + ++ Y+Y A
Sbjct: 565 FAIPCFVVLTFFIYYYYA 582


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 303  PCFVSIYYYCYFYIANL 253
            P F+S Y  C F I NL
Sbjct: 1403 PYFISFYVLCSFLIINL 1419


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 119 KYIVIDRAFIHHY 81
           +Y+ +D  ++HHY
Sbjct: 29  RYVTMDETWLHHY 41


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 119 KYIVIDRAFIHHY 81
           +Y+ +D  ++HHY
Sbjct: 29  RYVTMDETWLHHY 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,418
Number of Sequences: 2352
Number of extensions: 5943
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)