Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30283
(706 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0) 222 2e-58
SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_12284| Best HMM Match : ATP-synt_ab (HMM E-Value=0) 47 2e-05
SB_40036| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_17834| Best HMM Match : Phage_attach (HMM E-Value=4) 30 1.6
SB_44024| Best HMM Match : Flavin_Reduct (HMM E-Value=0.79) 30 2.1
SB_20408| Best HMM Match : rve (HMM E-Value=0.0034) 29 2.8
SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_15449| Best HMM Match : Transposase_11 (HMM E-Value=9.6) 29 2.8
SB_24017| Best HMM Match : DUF646 (HMM E-Value=4.1) 29 4.9
SB_12626| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_54540| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=2.2) 29 4.9
SB_44762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_32354| Best HMM Match : Complex1_30kDa (HMM E-Value=5.8) 29 4.9
SB_8215| Best HMM Match : FeoB_N (HMM E-Value=4) 29 4.9
SB_59744| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_59600| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1.5e-05) 28 6.4
SB_57957| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_51307| Best HMM Match : Pox_A32 (HMM E-Value=0.032) 28 6.4
SB_41862| Best HMM Match : POR_N (HMM E-Value=3.5) 28 6.4
SB_40002| Best HMM Match : AvrB_AvrC (HMM E-Value=2.5) 28 6.4
SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023) 28 6.4
SB_38383| Best HMM Match : P_C (HMM E-Value=7.6) 28 6.4
SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24) 28 6.4
SB_30424| Best HMM Match : Chorion_3 (HMM E-Value=5.6) 28 6.4
SB_21902| Best HMM Match : TMP_2 (HMM E-Value=9.6) 28 6.4
SB_16041| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_13160| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_12491| Best HMM Match : rve (HMM E-Value=1.6e-18) 28 6.4
SB_12139| Best HMM Match : Autotransporter (HMM E-Value=1.4) 28 6.4
SB_11712| Best HMM Match : Trypsin (HMM E-Value=4) 28 6.4
SB_10503| Best HMM Match : Ribosomal_60s (HMM E-Value=0.46) 28 6.4
SB_10026| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_7075| Best HMM Match : Hormone_5 (HMM E-Value=2.3) 28 6.4
SB_2286| Best HMM Match : Cu_bind_like (HMM E-Value=6.6) 28 6.4
SB_50529| Best HMM Match : 7TMR-HDED (HMM E-Value=2.3) 28 6.4
SB_49498| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 6.4
SB_40356| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_38894| Best HMM Match : GatB (HMM E-Value=5) 28 6.4
SB_23949| Best HMM Match : PAPA-1 (HMM E-Value=6.1) 28 6.4
SB_22139| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_15620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_5254| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_2688| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0)
Length = 448
Score = 222 bits (543), Expect = 2e-58
Identities = 104/125 (83%), Positives = 116/125 (92%)
Frame = +2
Query: 212 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 391
DVQF+++LPPILNALEV+NR+PRL+LEVAQHLGENTVRTIAMDGTEGL+RGQ +D+G P
Sbjct: 85 DVQFDEDLPPILNALEVENRTPRLILEVAQHLGENTVRTIAMDGTEGLIRGQKCVDTGGP 144
Query: 392 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 571
I IPVG ETLGRIINVIGEPIDERGP+ TDK AAIHAEAPEFV+MS +QEIL TGIKVVD
Sbjct: 145 ITIPVGPETLGRIINVIGEPIDERGPVETDKRAAIHAEAPEFVEMSTEQEILETGIKVVD 204
Query: 572 LLAPY 586
LLAPY
Sbjct: 205 LLAPY 209
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 628 GQTVLIWELINNVAKAHGGYSVFAGV 705
G+TVLI ELINNVAKAHGGYSVFAGV
Sbjct: 224 GKTVLIMELINNVAKAHGGYSVFAGV 249
>SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +2
Query: 329 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 505
+ + G + L++ G V +G+ + +PVG E LGR+++ +G PID +GP + A + +
Sbjct: 12 VVVFGNDRLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGPTGGTR-ARVGVK 70
Query: 506 APEFVDMSVQQEILVTGIKVVDLLAP 583
AP + + +E ++TGIK VD L P
Sbjct: 71 APGIIPRTSVKEPMLTGIKAVDSLVP 96
>SB_12284| Best HMM Match : ATP-synt_ab (HMM E-Value=0)
Length = 238
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +1
Query: 628 GQTVLIWELINNVAKAHGGYSVFAGV 705
G+TVLI ELINN+AK HGG SVFAGV
Sbjct: 31 GKTVLIQELINNIAKGHGGLSVFAGV 56
>SB_40036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 322 NCVLTQMLGYLKYEAGRSILHLKGI*NRRQVIFEL-HIYHSTDNGNNLTLAFSCRFSS 152
NC+L + GYLK ++ I++ G QV++ L +Y S + GNNL F +S
Sbjct: 48 NCLLWTIYGYLKDDSTIIIVNFVGA--LLQVVYILCFLYFSRERGNNLAFLFYSAIAS 103
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/69 (34%), Positives = 29/69 (42%)
Frame = -2
Query: 513 SGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPSVPSM 334
SG+S+ A +L GP SS+ P T P PTG+ M P S P P P M
Sbjct: 671 SGSSS--AQMLPPMPGPPSSMSGPTTSRHGP---PPTGLTMNPPTSMGMAPMMPPPGPGM 725
Query: 333 AMVRTVFSP 307
SP
Sbjct: 726 GTHPQQVSP 734
>SB_17834| Best HMM Match : Phage_attach (HMM E-Value=4)
Length = 438
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQLR 546
WP QL FL +H RR+LY+LR
Sbjct: 325 WPQQLNFAVWGFLRFHVYFTTRRILYELR 353
>SB_44024| Best HMM Match : Flavin_Reduct (HMM E-Value=0.79)
Length = 308
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -2
Query: 447 SPITLMMRPRV-SAPTGIRMGEPESSTG 367
S +T +P SAPTGI G+P SSTG
Sbjct: 112 STLTAFGQPSTTSAPTGISFGQPTSSTG 139
>SB_20408| Best HMM Match : rve (HMM E-Value=0.0034)
Length = 887
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQLRESPAAQTCR 519
WP QL FL +H RR+LY+L +P T R
Sbjct: 128 WPQQLNFAVWGFLRFHVYFTTRRILYEL-GAPCLATAR 164
>SB_31771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1963
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = -3
Query: 704 TPANTEYPPWALATLLISSHINTVWPHQLRQTTQSFLLWHKERADRRL 561
TP +Y AL T+ + + W H L ++ +LW E + L
Sbjct: 130 TPTADQYVEQALGTIGVEQRTSGFWSHSLMLRSKLLVLWRVENRRKTL 177
>SB_15449| Best HMM Match : Transposase_11 (HMM E-Value=9.6)
Length = 363
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 656 ISSHINTVWPHQLRQTTQSFLLWHKERADRRLLYQL 549
+S N WP QL FL +H RR+LY+L
Sbjct: 167 LSEPSNGHWPQQLNFAVWGFLRFHVYFTTRRILYEL 202
>SB_24017| Best HMM Match : DUF646 (HMM E-Value=4.1)
Length = 486
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 128 WPQQLNFAVWGFLRFHAYFTTRRILYEL 155
>SB_12626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 363
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 383 GSPIRIPVGAETLGRIINVIGEPIDERGPIPT 478
G PI P+G +GR I IG PI GPI T
Sbjct: 283 GRPIGRPIGL--IGRPIGPIGRPIGPIGPIGT 312
>SB_54540| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=2.2)
Length = 558
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 206 WPQQLNFAVWGFLRFHVYSITRRILYEL 233
>SB_44762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 892
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 128 WPQQLNFAVWGFLRFHAYFTTRRILYEL 155
>SB_32354| Best HMM Match : Complex1_30kDa (HMM E-Value=5.8)
Length = 187
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL + FL +H RR+LY+L
Sbjct: 127 WPQQLNFAVRGFLRFHVYFTMRRILYEL 154
>SB_8215| Best HMM Match : FeoB_N (HMM E-Value=4)
Length = 231
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -1
Query: 571 IDDFYTSYENLLLHRHVDKLWSFSMNSSSLVGGDGTAL-VNRFAD--YIDDASEGFSSH 404
+DD Y Y + L+ +VD L+ V G L V+ + D Y+D +GF SH
Sbjct: 168 VDDLYNGYVDDLIDGYVDDLYVDGYVDDLYVDGYVDDLYVDGYVDDLYVDGYVDGFQSH 226
>SB_59744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 126 WPQQLNFAVWGFLRFHVYFTTRRILYEL 153
>SB_59600| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1.5e-05)
Length = 1119
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 626 HQLRQTTQSFLLWHKERADRRLLYQLRESPAAQTCRQTLEL 504
+ LR + WH+E+ R +++ LRE A C Q +E+
Sbjct: 467 YDLRGMKEEDAQWHREQVSRGVVFNLREELAIY-CHQDVEV 506
>SB_57957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 130 WPQQLNFAVWGFLRFHVYFTTRRILYEL 157
>SB_51307| Best HMM Match : Pox_A32 (HMM E-Value=0.032)
Length = 1036
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 90 WPQQLNFAVWGFLRFHVYFTTRRILYEL 117
>SB_41862| Best HMM Match : POR_N (HMM E-Value=3.5)
Length = 994
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 407 WPQQLNFAVWGFLRFHVYFTTRRILYEL 434
>SB_40002| Best HMM Match : AvrB_AvrC (HMM E-Value=2.5)
Length = 633
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 408 WPQQLNFAVWGFLRFHVYFTTRRILYEL 435
>SB_39665| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
Length = 1640
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 127 WPQQLNFAVWGFLRFHVYFTTRRILYEL 154
>SB_38383| Best HMM Match : P_C (HMM E-Value=7.6)
Length = 401
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 280 WPQQLNFAVWGFLRFHVYFTTRRILYEL 307
>SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24)
Length = 1497
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 13 WPQQLNFAVWGFLRFHVYFTTRRILYEL 40
>SB_30424| Best HMM Match : Chorion_3 (HMM E-Value=5.6)
Length = 377
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 68 WPQQLNFAVWGFLRFHVYFTTRRILYEL 95
>SB_21902| Best HMM Match : TMP_2 (HMM E-Value=9.6)
Length = 267
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 226 WPQQLNFAVWGFLKFHVYFTTRRILYEL 253
>SB_16041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 69 WPQQLNFAVWGFLRFHVYFTTRRILYEL 96
>SB_13160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 31 WPQQLNFAVWGFLRFHVYFTTRRILYEL 58
>SB_12491| Best HMM Match : rve (HMM E-Value=1.6e-18)
Length = 1106
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 108 WPQQLNFAVWGFLRFHVYFTTRRILYEL 135
>SB_12139| Best HMM Match : Autotransporter (HMM E-Value=1.4)
Length = 751
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 65 WPQQLNFAVWGFLRFHVYFTTRRILYEL 92
>SB_11712| Best HMM Match : Trypsin (HMM E-Value=4)
Length = 562
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 176 WPQQLNFAVWGFLRFHVYFTTRRILYEL 203
>SB_10503| Best HMM Match : Ribosomal_60s (HMM E-Value=0.46)
Length = 787
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 192 WPQQLNFAVWGFLRFHVYFTTRRILYEL 219
>SB_10026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 227 WPQQLNFAVWGFLRFHVYFTTRRILYEL 254
>SB_7075| Best HMM Match : Hormone_5 (HMM E-Value=2.3)
Length = 1259
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 127 WPQQLNFAVWGFLRFHVYFTTRRILYEL 154
>SB_2286| Best HMM Match : Cu_bind_like (HMM E-Value=6.6)
Length = 326
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 42 WPQQLNFAVWGFLRFHVYFTTRRILYEL 69
>SB_50529| Best HMM Match : 7TMR-HDED (HMM E-Value=2.3)
Length = 697
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 127 WPQQLNFAVWGFLRFHVYFTTRRILYEL 154
>SB_49498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 112 WPQQLNFAVWGFLRFHVYFTTRRILYEL 139
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 218 WPQQLNFAVWGFLRFHVYFTTRRILYEL 245
>SB_40356| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 242 WPQQLNFAVWGFLRFHVYFTTRRILYEL 269
>SB_38894| Best HMM Match : GatB (HMM E-Value=5)
Length = 169
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 128 WPQQLNFAVWEFLRFHVYFTTRRILYEL 155
>SB_23949| Best HMM Match : PAPA-1 (HMM E-Value=6.1)
Length = 237
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 147 WPQQLNFAVWGFLRFHVYFTTRRILYEL 174
>SB_22139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 44 WPQQLNFAVWGFLRFHVYFTTRRILYEL 71
>SB_15620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 31 WPQQLNFAVWGFLRFHVYFTTRRILYEL 58
>SB_5254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 128 WPQQLNFAVWGFLRFHVYFTTRRILYEL 155
>SB_2688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 632 WPHQLRQTTQSFLLWHKERADRRLLYQL 549
WP QL FL +H RR+LY+L
Sbjct: 78 WPQQLNFAVWGFLRFHVYFTTRRILYEL 105
>SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = -1
Query: 613 KQPNLSSFGIRSEQIDDFYTSYENLLLHRHVDKLWSFSMNSSSLVGGDGTALVNRF 446
+QP L G D + YE+LL RH DKL + N S + GD RF
Sbjct: 50 QQPMLLEIGAPINIFGDIHGQYEDLL--RHFDKL-GYPPNESYIFLGDYVDRPKRF 102
>SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 362 GQPVLDSGSPIRIPVGAETL--GRIINVIGEPIDERGP 469
GQP D+G P G + G+++N GEP++ GP
Sbjct: 94 GQPANDTGQPSS-NAGQPLINTGQLVNNTGEPVNNTGP 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,903,343
Number of Sequences: 59808
Number of extensions: 496182
Number of successful extensions: 1314
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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