Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30281
(638 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145691-1|AAD38666.1| 306|Drosophila melanogaster BcDNA.LD2988... 123 2e-28
AE014134-1103|AAF52392.1| 306|Drosophila melanogaster CG9543-PA... 123 2e-28
AY051440-1|AAK92864.1| 570|Drosophila melanogaster GH11140p pro... 33 0.33
AE014297-2075|AAF55219.1| 570|Drosophila melanogaster CG4525-PA... 33 0.33
L42511-1|AAC41607.1| 224|Drosophila melanogaster shortsighted c... 31 1.00
AF003342-1|AAB61239.1| 225|Drosophila melanogaster bunched prot... 31 1.00
AE014134-2215|AAF53200.2| 219|Drosophila melanogaster CG5461-PB... 31 1.00
AE014297-4823|AAF57207.1| 1844|Drosophila melanogaster CG1976-PA... 28 9.3
>AF145691-1|AAD38666.1| 306|Drosophila melanogaster BcDNA.LD29885
protein.
Length = 306
Score = 123 bits (297), Expect = 2e-28
Identities = 70/201 (34%), Positives = 115/201 (57%), Gaps = 2/201 (0%)
Frame = +3
Query: 3 HQQDVDE-LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQ 179
+++D + LFD +N +Y+GN+ +IN V P + +++Y SY+A + RIV
Sbjct: 6 NEEDTNSVLFDARNEYYIGNFMGSIN---FVLPEQGTAGPELLSYMYLSYLAIDSGRIVA 62
Query: 180 QELKTADPM-LQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHE 356
++K + LQ L+ + + + ++ + +VA G E I+ + A +Y H+
Sbjct: 63 SDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEEDETNIWHLATAIVYCHD 121
Query: 357 DNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLN 536
+E ALKILH + +LE A ++QCLL + R DLA++ + +Q+I DD TLTQLAQAW+
Sbjct: 122 GQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQEISDDATLTQLAQAWVA 181
Query: 537 LIQGGPGIQDAHYSVMELSER 599
L QG +QDA + E E+
Sbjct: 182 LAQGTEQMQDAFHIYQEFCEK 202
>AE014134-1103|AAF52392.1| 306|Drosophila melanogaster CG9543-PA
protein.
Length = 306
Score = 123 bits (297), Expect = 2e-28
Identities = 70/201 (34%), Positives = 115/201 (57%), Gaps = 2/201 (0%)
Frame = +3
Query: 3 HQQDVDE-LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQ 179
+++D + LFD +N +Y+GN+ +IN V P + +++Y SY+A + RIV
Sbjct: 6 NEEDTNSVLFDARNEYYIGNFMGSIN---FVLPEQGTAGPELLSYMYLSYLAIDSGRIVA 62
Query: 180 QELKTADPM-LQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHE 356
++K + LQ L+ + + + ++ + +VA G E I+ + A +Y H+
Sbjct: 63 SDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEEDETNIWHLATAIVYCHD 121
Query: 357 DNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLN 536
+E ALKILH + +LE A ++QCLL + R DLA++ + +Q+I DD TLTQLAQAW+
Sbjct: 122 GQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQEISDDATLTQLAQAWVA 181
Query: 537 LIQGGPGIQDAHYSVMELSER 599
L QG +QDA + E E+
Sbjct: 182 LAQGTEQMQDAFHIYQEFCEK 202
>AY051440-1|AAK92864.1| 570|Drosophila melanogaster GH11140p
protein.
Length = 570
Score = 33.1 bits (72), Expect = 0.33
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Frame = +3
Query: 6 QQDVDELFDVKNAFYVGNYQQAINEAQSV--SPSTPLVALQRDAFLYRSYIAQGNYRIVQ 179
Q VD+ N F++G+YQQA+ + +++ STP L + + Y+ G Y Q
Sbjct: 73 QSQVDQWIAFCN-FHLGDYQQALAQYKAIQQGSSTPDGKLDLNLAVCMFYL--GLYEEAQ 129
Query: 180 QELKTADPMLQPLKS-LVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHE 356
Q + A PLK L+ +L + + + + L ++ L A+++Y
Sbjct: 130 QLMANAAD--NPLKQRLLFHLAHKLGNEEEWSQLQEELQDSSSLEQQLSL---ASMHYMR 184
Query: 357 DNYEAALKI-----LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 509
+Y+ A+ + + N E + + C ++ D++++ L + D T+
Sbjct: 185 AHYQEAIDVYKRVLVDNKEYQAINVYLALCFYKLDYYDMSQEVLDVYLSQHGDSTI 240
>AE014297-2075|AAF55219.1| 570|Drosophila melanogaster CG4525-PA
protein.
Length = 570
Score = 33.1 bits (72), Expect = 0.33
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Frame = +3
Query: 6 QQDVDELFDVKNAFYVGNYQQAINEAQSV--SPSTPLVALQRDAFLYRSYIAQGNYRIVQ 179
Q VD+ N F++G+YQQA+ + +++ STP L + + Y+ G Y Q
Sbjct: 73 QSQVDQWIAFCN-FHLGDYQQALAQYKAIQQGSSTPDGKLDLNLAVCMFYL--GLYEEAQ 129
Query: 180 QELKTADPMLQPLKS-LVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHE 356
Q + A PLK L+ +L + + + + L ++ L A+++Y
Sbjct: 130 QLMANAAD--NPLKQRLLFHLAHKLGNEEEWSQLQEELQDSSSLEQQLSL---ASMHYMR 184
Query: 357 DNYEAALKI-----LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 509
+Y+ A+ + + N E + + C ++ D++++ L + D T+
Sbjct: 185 AHYQEAIDVYKRVLVDNKEYQAINVYLALCFYKLDYYDMSQEVLDVYLSQHGDSTI 240
>L42511-1|AAC41607.1| 224|Drosophila melanogaster shortsighted
class 1 protein.
Length = 224
Score = 31.5 bits (68), Expect = 1.00
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +3
Query: 189 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 368
K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I A E E
Sbjct: 28 KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI--AVREEVEVLKE 84
Query: 369 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKL 479
+++ LEL +L N P +QL+L
Sbjct: 85 RISELMDKINKLELE----NSILKSNIPQETLQQLQL 117
>AF003342-1|AAB61239.1| 225|Drosophila melanogaster bunched
protein.
Length = 225
Score = 31.5 bits (68), Expect = 1.00
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 189 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLI 329
K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I
Sbjct: 29 KQEDPVCEVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI 74
>AE014134-2215|AAF53200.2| 219|Drosophila melanogaster CG5461-PB,
isoform B protein.
Length = 219
Score = 31.5 bits (68), Expect = 1.00
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +3
Query: 189 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 368
K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I A E E
Sbjct: 28 KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI--AVREEVEVLKE 84
Query: 369 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKL 479
+++ LEL +L N P +QL+L
Sbjct: 85 RISELMDKINKLELE----NSILKSNIPQETLQQLQL 117
>AE014297-4823|AAF57207.1| 1844|Drosophila melanogaster CG1976-PA
protein.
Length = 1844
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 255 KSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCL 434
K ++ D R G +S+EIF + A H+ N AAL+ + + +R +C+
Sbjct: 78 KDPVMLQGDFRKVSG--ISSEIFRQIEAVENDHDPNTAAALEAVERRGEMIVRVLEPRCM 135
Query: 435 LAMNRPDLARK 467
+ D A K
Sbjct: 136 GSKQAVDAAHK 146
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,717,580
Number of Sequences: 53049
Number of extensions: 616728
Number of successful extensions: 1650
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -