Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30278
(545 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 31 0.46
SB_8484| Best HMM Match : Heme_oxygenase (HMM E-Value=0) 31 0.61
SB_54445| Best HMM Match : CMV_US (HMM E-Value=3.9) 30 1.1
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_40649| Best HMM Match : AT_hook (HMM E-Value=3.7) 30 1.4
SB_7289| Best HMM Match : EGF_CA (HMM E-Value=0) 29 1.9
SB_58184| Best HMM Match : DUF1545 (HMM E-Value=3.6) 29 1.9
SB_2747| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_30354| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_19238| Best HMM Match : DUF729 (HMM E-Value=1.4) 29 2.5
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_47176| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 29 3.3
SB_8618| Best HMM Match : zf-C2H2 (HMM E-Value=5.7) 29 3.3
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_51909| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37) 28 4.3
SB_50758| Best HMM Match : DUF1545 (HMM E-Value=3.6) 28 4.3
SB_48360| Best HMM Match : EGF (HMM E-Value=0.1) 28 4.3
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_33256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_32215| Best HMM Match : FtsX (HMM E-Value=0.29) 28 4.3
SB_31559| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37) 28 4.3
SB_4537| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37) 28 4.3
SB_57080| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-43) 28 4.3
SB_49451| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37) 28 4.3
SB_46806| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_39012| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_29318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0) 28 4.3
SB_11739| Best HMM Match : DUF1545 (HMM E-Value=3.6) 28 4.3
SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0) 28 4.3
SB_4523| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058) 24 4.9
SB_47480| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_18012| Best HMM Match : Flavoprotein (HMM E-Value=4.4) 28 5.7
SB_36087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_19680| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11) 27 7.6
SB_1089| Best HMM Match : AbfB (HMM E-Value=0.034) 27 7.6
SB_57231| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_48076| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_43133| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_33516| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_29495| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_17198| Best HMM Match : HEAT (HMM E-Value=1.8e-15) 27 7.6
SB_6552| Best HMM Match : Glyco_transf_9 (HMM E-Value=1.9) 27 7.6
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 31.5 bits (68), Expect = 0.46
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 36 AASQSLTSAERVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHA--PTEVEARRDS 209
A+S + + + P SS+G P PVA PP + PPP + PT V A
Sbjct: 369 ASSSGVPTPVKAPPPSVFASSSGVPTPVAAPPPA----PPPSVFAPSSGVPTPVAA---P 421
Query: 210 PPRV-VPSWG 236
PP V PS G
Sbjct: 422 PPSVFAPSSG 431
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +3
Query: 27 FGPAAS--QSLTSAERVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHA--PTEVE 194
F P++ ++T+ P S+G P PV +PP + PPP + PT V
Sbjct: 502 FAPSSGVPTTVTAPPAAPPPSVFAPSSGVPTPVTEPPPA----PPPSVFAPSSGVPTPVT 557
Query: 195 ARRDSPP 215
A +PP
Sbjct: 558 APPPAPP 564
>SB_8484| Best HMM Match : Heme_oxygenase (HMM E-Value=0)
Length = 820
Score = 31.1 bits (67), Expect = 0.61
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 355 CPVMG*VAGGCPVVRAVPGDRPLVK 281
CPV V+GGCP A G +PLV+
Sbjct: 201 CPVFKPVSGGCPFKAASEGGKPLVE 225
>SB_54445| Best HMM Match : CMV_US (HMM E-Value=3.9)
Length = 460
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+R RR+S G P FD
Sbjct: 70 PSDSDIGASRSQMEKEKRQRRSSNGVPSFD 99
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +3
Query: 87 HLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRVVP 227
H S+ P P PP++ A PPP AP A +PP P
Sbjct: 44 HFISSSPPPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPP 90
>SB_40649| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +3
Query: 42 SQSLTSAERVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRV 221
+Q++ AE V + P+P P +S A PP H P R P R
Sbjct: 168 NQTVPPAEPVAETPPTTQANNDPVPSCMPDASSQAPQPP-----HEPRRPTRARTRPKRY 222
Query: 222 VPSWGNFSV 248
P GN++V
Sbjct: 223 EPETGNWTV 231
>SB_7289| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 278
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATG 113
C P +SGGG+ C D C TG
Sbjct: 119 CNPGFSGGGRNCTDIDECVTG 139
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -2
Query: 208 ESLRASTSVGA----CCPTYSGGGKACHDEGGCATG 113
++ R + ++G+ C P +SG G+ C D C TG
Sbjct: 186 KNARCNNTIGSYHCMCNPGFSGNGRECTDIDECVTG 221
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -2
Query: 208 ESLRASTSVGA----CCPTYSGGGKACHDEGGCATG 113
++ R + ++G+ C P +SG G+ C D C TG
Sbjct: 227 KNARCNNTIGSYHCMCNPGFSGNGRECTDIDECVTG 262
>SB_58184| Best HMM Match : DUF1545 (HMM E-Value=3.6)
Length = 251
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S+G P FD
Sbjct: 70 PSDSDIEASRSQMEKEKGQRRSSSGVPSFD 99
>SB_2747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 12 RLTFPFGPAASQSLTSA-ERVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTE 188
RL P AS S T A E+ + ++ S G PL + +PP W + P ++
Sbjct: 14 RLLVLKSPTASYSKTQAVEKFKKCTSNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAV 73
Query: 189 VEARRD 206
V RRD
Sbjct: 74 VLQRRD 79
>SB_30354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 69 VEPALAHLSSTGFP-LPVAQPPSSWH 143
V P+L H S F LP+ Q P+SWH
Sbjct: 507 VTPSLPHQSRRSFESLPLLQQPNSWH 532
>SB_19238| Best HMM Match : DUF729 (HMM E-Value=1.4)
Length = 647
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 60 AERVEPALAHLSSTGFPLPVAQPP-SSWHALPPPEYV--GQHAPTEVEARRDSPPRVVPS 230
A + ++ + S F P +PP + LPPP + QHA T + ++ PR PS
Sbjct: 191 ATTLSSSIFRMESLLFNRPAPRPPLDTPPPLPPPPSLEENQHAKTAGNIKLEATPREAPS 250
Query: 231 WG 236
G
Sbjct: 251 EG 252
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 178 ACCPTYSGGGKACHDEGGCATGSGKPVELRCASAGST 68
AC Y+G G+ C D C+ GS CA +GST
Sbjct: 748 ACNAGYTGNGETCADIDECSVGSH-----TCAPSGST 779
>SB_47176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = -2
Query: 208 ESLRASTSVGA----CCPTYSGGGKACHDEGGCATG 113
++ R + ++G+ C P +SG G+ C D CATG
Sbjct: 114 KNARCNNTIGSYHCTCNPGFSGDGRNCTDIDECATG 149
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATG 113
C P +SG G+ C D C TG
Sbjct: 334 CNPGFSGNGRECTDTDECVTG 354
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATG 113
C P +SG G+ C D C TG
Sbjct: 293 CNPGFSGNGRECTDIDECVTG 313
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATG 113
C P +SG G+ C D C TG
Sbjct: 375 CNPGFSGNGRECTDIDECVTG 395
>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
Length = 427
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 212 WRIPPCFHLGGSMLPHVFWGGQSMPR 135
+++PPC GG + P V + G S+P+
Sbjct: 325 FKVPPCKACGGILKPEVVFFGDSVPK 350
>SB_8618| Best HMM Match : zf-C2H2 (HMM E-Value=5.7)
Length = 293
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S G P FD
Sbjct: 70 PSDSDIEASRSQMVKEKGQRRSSNGVPSFD 99
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = -2
Query: 232 QEGTTLGGESLRASTSVGA----CCPTYSGGGKACHDEGGCATG 113
Q G + E+ R + VG+ C P + G G +C D C TG
Sbjct: 386 QTGQAMCHENARCANLVGSYRCECKPGFIGDGSSCTDVDECTTG 429
>SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -2
Query: 211 GESLRASTSVGA----CCPTYSGGGKACHDEGGCATG 113
G++ + + ++G+ C P +SG G+ C D C TG
Sbjct: 167 GKNAKCNNTIGSYHCMCNPGFSGDGRECTDIDECVTG 203
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATG 113
C P +SG G+ C D CATG
Sbjct: 224 CNPGFSGDGRNCTDIDECATG 244
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATG 113
C P +SG G+ C D C TG
Sbjct: 552 CNPGFSGNGRECTDTDECVTG 572
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATG 113
C P +SG G+ C D C TG
Sbjct: 593 CNPGFSGNGRECTDIDECVTG 613
>SB_51909| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37)
Length = 575
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S G P FD
Sbjct: 70 PSDSDIEASRSQMEKEKGQRRSSNGVPSFD 99
>SB_50758| Best HMM Match : DUF1545 (HMM E-Value=3.6)
Length = 410
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S G P FD
Sbjct: 70 PSDSDIEASRSQMEKEKGQRRSSNGVPSFD 99
>SB_48360| Best HMM Match : EGF (HMM E-Value=0.1)
Length = 594
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S G P FD
Sbjct: 70 PSDSDIEASRRQMEKEKGQRRSSNGVPSFD 99
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 279 YLTRGRSPGTALTTGHPPATHPITGH-VTGLGL-GHFL 386
+ RG + TGH H +TGH VTG L GHF+
Sbjct: 1293 HTVRGHTVTDHTVTGHNVTGHKVTGHTVTGHTLTGHFV 1330
>SB_33256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S G P FD
Sbjct: 70 PSDSDIEASRSKMEKEKGQRRSSNGVPSFD 99
>SB_32215| Best HMM Match : FtsX (HMM E-Value=0.29)
Length = 237
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S G P FD
Sbjct: 70 PSDSDIEASRSQMEKEKGQRRSSNGVPSFD 99
>SB_31559| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37)
Length = 554
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S G P FD
Sbjct: 31 PSDSDIEASRSQMEKEKGQRRSSNGVPSFD 60
>SB_4537| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37)
Length = 593
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S G P FD
Sbjct: 70 PSDSDIEASRSQMEKEKGQRRSSNGVPSFD 99
>SB_57080| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-43)
Length = 360
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 178 ACCPTYSGGGKACHDEGGCATGS 110
AC Y+G G C D CA GS
Sbjct: 173 ACNAGYTGNGHTCQDTNECADGS 195
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 178 ACCPTYSGGGKACHDEGGCATGS 110
AC Y+G G C D CA GS
Sbjct: 214 ACNAGYTGNGHTCQDTNECADGS 236
>SB_49451| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37)
Length = 415
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S G P FD
Sbjct: 70 PSDSDIEASRSQMEKEKGQRRSSNGVPSFD 99
>SB_46806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 49
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 27 FGPAASQSLTSAERVEPALAHLSSTG-FPLP 116
FGP S SL ER P AH+ +T +P+P
Sbjct: 3 FGPPPSSSLELEERTCPIKAHVKTTKLYPIP 33
>SB_39012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 66 RVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRD 206
R E AL++ S G PL + +PP W + P ++ V RRD
Sbjct: 41 RAEAALSNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAVVLQRRD 87
>SB_37708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 HTSVRRVFRCPSHSPLH-RGMLCPPQNTWGSMLPPRWKHGGILHLEWYPPGVIFPLSLP 258
+ S ++ +C + P G PPQ+ G+ LPP+ G L + P I P S+P
Sbjct: 1034 YLSSQKSIQCATLPPQSIPGASIPPQSIPGAFLPPQSIPGASLPPQSIPGASISPQSIP 1092
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 241 KLPQEGTTLGGESLRASTSVGACC-PTYSGGGKACHDEG 128
KLP+ + E + + S C P ++G GK C D G
Sbjct: 546 KLPKNDCDVNAECINSIGSYSCICKPGFTGNGKTCTDLG 584
>SB_29318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 33 PAASQSLTSAERVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRD 206
PAA + ER A ++ S G PL + +PP W + P ++ V RRD
Sbjct: 8 PAAVLTPAPVERQHVAASNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAVVLQRRD 65
>SB_17530| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 165
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 241 KLPQEGTTLGGESLRASTSVGACC-PTYSGGGKACHDEG 128
KLP+ + E + + S C P ++G GK C D G
Sbjct: 89 KLPKNDCDVNAECINSIGSYSCICKPGFTGNGKTCTDLG 127
>SB_11739| Best HMM Match : DUF1545 (HMM E-Value=3.6)
Length = 540
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S G P FD
Sbjct: 70 PSDSDIEASRSQMEKEKGQRRSSNGVPSFD 99
>SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 263
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATG 113
C P +SG G+ C D C TG
Sbjct: 227 CNPGFSGNGRECTDTDECVTG 247
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATG 113
C P +SG G+ C D C TG
Sbjct: 22 CNPGFSGNGRECTDIDECVTG 42
>SB_4523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 27 FGPAASQSLTSAERVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRD 206
F PA + S ++ + P +++ S G PL + +PP W + P ++ V RRD
Sbjct: 29 FMPATATSFRTSNK--PTISNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAVVLQRRD 86
>SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058)
Length = 820
Score = 24.2 bits (50), Expect(2) = 4.9
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +1
Query: 163 TWGSMLPPRWKHGGILHLEWYPPG 234
+W S PR+ H G +YP G
Sbjct: 430 SWKSTAQPRYYHSGNPQSRYYPSG 453
Score = 22.2 bits (45), Expect(2) = 4.9
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +1
Query: 220 WYPPGVIFPL---SLPSFIYSFII*PGVGPLGRP 312
W + PL +PS I PG+ PLG P
Sbjct: 473 WKSTAQVLPLLEIHIPSITSLEIYSPGITPLGNP 506
>SB_47480| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 72 EPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRD 206
E A A L S G PL + +PP W + P ++ V RRD
Sbjct: 40 EGAFARLESPGDPLVLERPPPRWSSNSPYSESYYNSLAVVLQRRD 84
>SB_18012| Best HMM Match : Flavoprotein (HMM E-Value=4.4)
Length = 180
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 69 VEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRD 206
+EP L++ S G PL + +PP W + P ++ V RRD
Sbjct: 52 LEPILSNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAVVLQRRD 97
>SB_36087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 48 SLTSAERVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRD 206
++ S +R AL++ S G PL + +PP W + P ++ V RRD
Sbjct: 2 TIVSLDRESYALSNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAVVLQRRD 54
>SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCAT 116
C P Y+G GK C D C T
Sbjct: 233 CNPGYTGDGKTCDDVNECTT 252
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATGSGKPVELRCASAGSTRSALVSDC 44
C P Y+G K C+D CA P + + A +T + C
Sbjct: 191 CKPGYTGDRKTCNDIDECAISGDSPCD-KNAECNNTVGSYTCTC 233
>SB_5020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATG 113
C P +SG GK C D C TG
Sbjct: 261 CNPGFSGDGKNCTDIDECVTG 281
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -2
Query: 208 ESLRASTSVGA----CCPTYSGGGKACHDEGGCATG 113
++ R + ++G+ C P +SG G+ C D C TG
Sbjct: 451 KNARCNNTIGSYHCTCNPGFSGDGRECTDMDECVTG 486
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -2
Query: 208 ESLRASTSVGA----CCPTYSGGGKACHDEGGCATG 113
++ R + ++G+ C P +SG G+ C D C TG
Sbjct: 369 KNARCNNTIGSYHCTCNPGFSGDGRECTDIDECVTG 404
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -2
Query: 208 ESLRASTSVGA----CCPTYSGGGKACHDEGGCATG 113
++ R + ++G+ C P +SG G+ C D C TG
Sbjct: 410 KNARCNNTIGSYHCRCNPGFSGDGRECTDIDECVTG 445
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATG 113
C P +SG G+ C D C TG
Sbjct: 548 CNPGFSGNGRECTDIDECGTG 568
>SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -2
Query: 208 ESLRASTSVGA----CCPTYSGGGKACHDEGGCATGS 110
++ R + ++G+ C P +SG G+ C D C TG+
Sbjct: 69 KNARCNNTIGSYHCTCNPGFSGDGRNCTDIDECVTGN 105
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCATGS 110
C P +SG G+ C D C TG+
Sbjct: 125 CNPGFSGNGRNCTDIDECVTGN 146
>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +3
Query: 99 TGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRVVPS 230
TG +P + PPPE V P E PP V PS
Sbjct: 708 TGIDIPHSPSKDDLPLPPPPEEVSLPPPDESPPSSKHPPTVSPS 751
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 117 VAQPPSSWHALPPPEYVGQHAPTEVEARRDSPP 215
V PP++ A PPP A T DSPP
Sbjct: 103 VPPPPATTSAPPPPTTTAPPATTSPPTTTDSPP 135
>SB_19680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -1
Query: 113 QRKTRRTEVCQRWLDALCARQ 51
Q++T++TE C+RW+ A C R+
Sbjct: 73 QQETQKTEKCKRWIHA-CGRK 92
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 175 CCPTYSGGGKACHDEGGCAT 116
C P S GG+ CH G C T
Sbjct: 913 CTPISSCGGEVCHQFGECVT 932
>SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR+S G P FD
Sbjct: 40 PRDSDIEASRSQMEKEKGHRRSSNGVPSFD 69
>SB_5182| Best HMM Match : TSP_1 (HMM E-Value=1.1e-11)
Length = 1417
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Frame = -2
Query: 172 CPTYSG----GGKACHDEGGCATGSGKPVELRCASAGSTR 65
CP+ G G C +EG CA G + CA A S R
Sbjct: 525 CPSIGGKECAGHGVCTNEGKCACDPGYDIASSCAKAYSPR 564
>SB_1089| Best HMM Match : AbfB (HMM E-Value=0.034)
Length = 472
Score = 27.5 bits (58), Expect = 7.6
Identities = 19/66 (28%), Positives = 24/66 (36%)
Frame = -2
Query: 232 QEGTTLGGESLRASTSVGACCPTYSGGGKACHDEGGCATGSGKPVELRCASAGSTRSALV 53
QEG GG STS + SGGG G G G + + S+L
Sbjct: 145 QEGGGQGGAQAGGSTSGSSSGGATSGGGGVSGSSGTSIAGGGSSAGAGAGATSAGGSSLA 204
Query: 52 SDCEAA 35
+ AA
Sbjct: 205 AATAAA 210
>SB_57231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 11 PPDFPFRASRLAVADERRARRASAGTPQFD 100
P D ASR + E+ RR S G P FD
Sbjct: 70 PSDSDIEASRSQMEKEKGQRRLSNGVPSFD 99
>SB_48076| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -1
Query: 113 QRKTRRTEVCQRWLDALCARQ 51
Q++T++TE C+RW+ A C R+
Sbjct: 73 QQETQKTEKCKRWIHA-CGRK 92
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 27.5 bits (58), Expect = 7.6
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Frame = +3
Query: 33 PAASQSLTSAERVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRDSP 212
P+ S S E +P+ H P P PS H P PE+ + ++ S
Sbjct: 772 PSPEHSQPSPEHSQPSPEHSQ----PSPEHSQPSPEHCQPSPEHSQPSPEHSLPSQEHSL 827
Query: 213 PRVVPSWGN--FSVKSAIIYLFLYYLTRGRSPGTALTTGHPPATHPITGHV 359
P S G V+S + L ++PG A+ A+ P+ H+
Sbjct: 828 PSPTSSLGEQVCDVQSTSAQSYTSDLVL-QTPGGAVEHSLASASKPVEQHL 877
>SB_43133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 66 RVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRD 206
R+ P +++ S G PL + +PP W + P ++ V RRD
Sbjct: 5 RIPPGVSNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAVVLQRRD 51
>SB_33516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 69 VEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRD 206
V+PA ++ S G PL + +PP W + P ++ V RRD
Sbjct: 41 VDPARSNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAVVLQRRD 86
>SB_29495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 75 PALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTEVEARRD 206
PAL++ S G PL + +PP W + P ++ V RRD
Sbjct: 35 PALSNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAVVLQRRD 78
>SB_17198| Best HMM Match : HEAT (HMM E-Value=1.8e-15)
Length = 802
Score = 27.5 bits (58), Expect = 7.6
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +3
Query: 9 FRLTFPFGPAASQSLTSAERVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAPTE 188
F FP P + SAE V +++ S G PL + +PP W + P ++
Sbjct: 67 FERQFPVRPPSPILYCSAECVM-TISNSCSPGDPLVLERPPPRWSSNSPYSESYYNSLAV 125
Query: 189 VEARRD 206
V RRD
Sbjct: 126 VLQRRD 131
>SB_6552| Best HMM Match : Glyco_transf_9 (HMM E-Value=1.9)
Length = 930
Score = 27.5 bits (58), Expect = 7.6
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Frame = -2
Query: 211 GESLRASTSVGACCPTYSGGGKA------CHDEGGCATGSGKPVELRCASAG-STRSALV 53
G S RAS+S C +++ G C CAT SG ++ CAS G A
Sbjct: 279 GASPRASSSADGKCYSWNRGKCTSPTFFVCQLSHRCATCSGPHPQVECASRGRKPNRARS 338
Query: 52 SDCEAAGPKGKVR 14
S PK +R
Sbjct: 339 SSPSTKPPKSPIR 351
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,374,050
Number of Sequences: 59808
Number of extensions: 495827
Number of successful extensions: 3369
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 3018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3352
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -