Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30278
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.53 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    26   0.93 
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   1.2  
EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle...    24   3.8  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   3.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   3.8  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.0  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   6.6  
AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative odorant-b...    23   6.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 0.53
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 294 RSPGTALTTGHPPATH 341
           R PG A  TG PP TH
Sbjct: 908 RGPGAAAATGPPPPTH 923



 Score = 25.0 bits (52), Expect = 1.6
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -2

Query: 160  SGGGKACHDEGGCATGSGKPVELRCASAGSTRSALVSDCEAAGP 29
            SGGG+A     G   G+G P EL       + S   S+  AA P
Sbjct: 1133 SGGGQANQAAAGSDGGAGSPAELSGNRERRSPSIPNSNAGAATP 1176


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 78  ALAHLSSTGFPLPVAQPPSSWHALPPPE 161
           AL  LS+TG   P+A+P ++  A P PE
Sbjct: 90  ALPKLSATGASKPIAEPKAA-SATPAPE 116


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 95  FDGFSAARRTAPFIVACFAPP 157
           F+GF  A     F  +C+APP
Sbjct: 69  FEGFCIAEVNGVFFCSCYAPP 89


>EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle
           protein protein.
          Length = 178

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +3

Query: 57  SAERVEPALAHLSSTGFPLPVAQPPSSWHALPPPEYVGQHAP 182
           +A    PA+ + ++  +  P    P++ H   P  +   HAP
Sbjct: 93  AAHYAAPAVHYPAAAHYAAPAVHYPAAAHYAAPAVHYAAHAP 134


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = -2

Query: 226 GTTLGGESLRASTSVGACCPTYSGGGKACHDEGGCATGSG 107
           GTT GG  L        C  T +GGG      GG  TG G
Sbjct: 179 GTTNGGGELTTGGGTNGC--TKAGGG-----GGGTGTGGG 211


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 27   FGPAASQSLTSAERVEPALAHLSSTGFPLPV 119
            +GPAAS ++ S     P L  +++T    PV
Sbjct: 1083 YGPAASDAIASIPAAVPLLLEVTTTVDHTPV 1113


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -2

Query: 232 QEGTTLGGESLRASTSVGACCPTYSGGGKACHDEGGCATGS 110
           +EG T      RAS     C P   GGG+ C   G C  G+
Sbjct: 619 REGWTGPACDCRASNET--CMPP--GGGELCSGHGTCECGT 655


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 114  PVAQPPSSWHALPPPEYVGQHAPTEVEARRDSPPRVVP 227
            P  + P     +  P+Y  +  PT   +   + PRVVP
Sbjct: 1074 PDYELPPEHSDVTTPDYDQRSTPTPQRSHTQAGPRVVP 1111


>AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative
           odorant-binding protein OBPjj4 protein.
          Length = 204

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 127 GCATGSGKPVELRCASAGSTRSALVSDCEAAGP 29
           GC  G+   V+  CA        ++  C+AA P
Sbjct: 30  GCHNGTSITVDECCAIPMLANKTVIEKCKAAHP 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,013
Number of Sequences: 2352
Number of extensions: 15770
Number of successful extensions: 43
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)