Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30277
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    24   0.67 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   1.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   1.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.2  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 379 DALYLPSVEDASRVLDEVAKGAVHV 453
           +A Y PS E  S+  DE+ K  +HV
Sbjct: 100 EAKYDPSGEYRSKYKDELEKNGIHV 124


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 145 THWPRLELATGTVNGKTPSLYYTSGR 68
           +H P +E   G  NGK     YTS +
Sbjct: 71  SHEPEMERPKGASNGKRARTAYTSSQ 96


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 145 THWPRLELATGTVNGKTPSLYYTSGR 68
           +H P +E   G  NGK     YTS +
Sbjct: 91  SHEPEMERPKGASNGKRARTAYTSSQ 116


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 87   KDGVLPFTVPVASSKRG 137
            KDGV+P  V + S+++G
Sbjct: 1080 KDGVIPDPVALKSAQQG 1096


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 355 PYLYDNLSDALYLPSVEDASRVLDEVAKGAVHV 453
           PY    L  A    SVE   RVLD +A   ++V
Sbjct: 239 PYRGIMLDTARNYMSVESIRRVLDGMAANKLNV 271


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,299
Number of Sequences: 336
Number of extensions: 2215
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)