Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30277
         (502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17690-1|CAA76815.1|   36|Anopheles gambiae gSG3 protein protein.      24   2.5  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   2.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   2.5  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   5.8  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   7.7  

>Y17690-1|CAA76815.1|   36|Anopheles gambiae gSG3 protein protein.
          Length = 36

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 91  MAFCRLLFPLLVLSVASASTVPVFL 165
           M  C +      ++VASA+T P+FL
Sbjct: 1   MKLCLIFLAAATIAVASAATGPLFL 25


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 91  MAFCRLLFPLLVLSVASASTVPVFL 165
           M  C +      ++VASA+T P+FL
Sbjct: 1   MKLCLIFLAAATIAVASAATGPLFL 25


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 394 PSVEDASRVLDEVAKGAVHVKL 459
           P VE  S   DE+ K A H+KL
Sbjct: 386 PDVEPVSISADEIQKAADHLKL 407


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 394 ASTERHLNYHTGTE 353
           AS + H+N HTGT+
Sbjct: 168 ASLQNHVNTHTGTK 181


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 383 LCTCLPSRMPQEYSTKSPKELFM 451
           LC  LP    Q+++  +P+EL +
Sbjct: 133 LCQFLPQDRVQDFTKMNPRELLL 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,057
Number of Sequences: 2352
Number of extensions: 8399
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)