Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30277
(502 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical ... 33 0.15
AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical ... 29 1.4
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 29 2.5
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 29 2.5
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 29 2.5
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 29 2.5
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 27 7.6
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 7.6
AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical ... 27 7.6
AF003386-5|AAK82898.1| 529|Caenorhabditis elegans Hypothetical ... 27 7.6
AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical ... 27 7.6
AF003386-1|AAK82899.1| 529|Caenorhabditis elegans Hypothetical ... 27 7.6
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 27 7.6
>AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical
protein Y52D5A.1 protein.
Length = 914
Score = 32.7 bits (71), Expect = 0.15
Identities = 14/52 (26%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 250 LNNELKDDPYVIVFLEETLSVEDFSRKNNEGDISIPYLYDNLSDALY-LPSV 402
+NN + D P + +FL+ + S+ D N+ D+ + Y++ +S++++ LP +
Sbjct: 458 MNNSIFDLPVIYIFLKMSNSIFDLPMSNSIFDLPVIYIFLKMSNSIFDLPVI 509
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/52 (23%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 250 LNNELKDDPYVIVFLEETLSVEDFSRKNNEGDISIPYLYDNLSDALY-LPSV 402
++N + D P + +FL+ + S+ N+ D+ + Y++ +S++++ LP +
Sbjct: 353 MSNSIFDLPVIYIFLKMSNSIFKLPMNNSIFDLPVIYIFLKMSNSIFDLPVI 404
>AF022981-2|AAG24200.1| 236|Caenorhabditis elegans Hypothetical
protein W03F9.2a protein.
Length = 236
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 382 RHLNYHTGTESKYHLRYFY 326
R+LN+HT E K+HL +F+
Sbjct: 100 RNLNFHTEDEGKHHLEHFH 118
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 206 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 84
D E ELL+K + NT TVD L L S +SK + F+
Sbjct: 67 DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 206 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 84
D E ELL+K + NT TVD L L S +SK + F+
Sbjct: 67 DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 206 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 84
D E ELL+K + NT TVD L L S +SK + F+
Sbjct: 67 DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 206 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 84
D E ELL+K + NT TVD L L S +SK + F+
Sbjct: 67 DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 206 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 84
D E ELL+K + NT TVD L L S +SK + F+
Sbjct: 67 DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 206 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 84
D E ELL+K + NT TVD L L S +SK + F+
Sbjct: 67 DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 206 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 84
D E ELL+K + NT TVD L L S +SK + F+
Sbjct: 67 DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 206 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 84
D E ELL+K + NT TVD L L S +SK + F+
Sbjct: 67 DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 206 DFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAIFV 84
D E ELL+K + NT TVD L L S +SK + F+
Sbjct: 67 DEEEVEELLNKGANINTCTVDGLTALHQSVIDSKPEMVRFL 107
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 373 LSDALYLPSVEDASRVLDEVAKGAVHVKLTQNGLSAA 483
++DA+ P V+D + D + GA K T+N L+++
Sbjct: 201 VADAVSTPPVQDGCYLYDTGSIGACTTKFTENSLTSS 237
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = -3
Query: 269 SFSSLFKISLNP*ADTVLNGFDFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAI 90
S SS +I + + VL+G + R ++ G ++ N S R +AI
Sbjct: 163 SMSSSIRIHEDSRGEIVLHGVEQRSVFDMHGTMDILKNGALNRTVAATNMNEQSSRSHAI 222
Query: 89 FVLH 78
F LH
Sbjct: 223 FTLH 226
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = -3
Query: 269 SFSSLFKISLNP*ADTVLNGFDFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAI 90
S SS +I + + VL+G + R ++ G ++ N S R +AI
Sbjct: 163 SMSSSIRIHEDSRGEIVLHGVEQRSVFDMHGTMDILKNGALNRTVAATNMNEQSSRSHAI 222
Query: 89 FVLH 78
F LH
Sbjct: 223 FTLH 226
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = -3
Query: 269 SFSSLFKISLNP*ADTVLNGFDFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAI 90
S SS +I + + VL+G + R ++ G ++ N S R +AI
Sbjct: 163 SMSSSIRIHEDSRGEIVLHGVEQRSVFDMHGTMDILKNGALNRTVAATNMNEQSSRSHAI 222
Query: 89 FVLH 78
F LH
Sbjct: 223 FTLH 226
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = -3
Query: 269 SFSSLFKISLNP*ADTVLNGFDFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAI 90
S SS +I + + VL+G + R ++ G ++ N S R +AI
Sbjct: 163 SMSSSIRIHEDSRGEIVLHGVEQRSVFDMHGTMDILKNGALNRTVAATNMNEQSSRSHAI 222
Query: 89 FVLH 78
F LH
Sbjct: 223 FTLH 226
>AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.4a protein.
Length = 527
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 385 ERHLNYHTGTESKYHLRYFYVKNLRPIRFLQG 290
E H +H GT +K F V+N + I LQG
Sbjct: 364 EPHYTFHVGTSNKSKSAKFNVENRQAIGQLQG 395
>AF003386-5|AAK82898.1| 529|Caenorhabditis elegans Hypothetical
protein F59E12.4b protein.
Length = 529
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 385 ERHLNYHTGTESKYHLRYFYVKNLRPIRFLQG 290
E H +H GT +K F V+N + I LQG
Sbjct: 364 EPHYTFHVGTSNKSKSAKFNVENRQAIGQLQG 395
>AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.5a protein.
Length = 527
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 385 ERHLNYHTGTESKYHLRYFYVKNLRPIRFLQG 290
E H +H GT +K F V+N + I LQG
Sbjct: 364 EPHYTFHVGTSNKSKSAKFNVENRQAIGQLQG 395
>AF003386-1|AAK82899.1| 529|Caenorhabditis elegans Hypothetical
protein F59E12.5b protein.
Length = 529
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 385 ERHLNYHTGTESKYHLRYFYVKNLRPIRFLQG 290
E H +H GT +K F V+N + I LQG
Sbjct: 364 EPHYTFHVGTSNKSKSAKFNVENRQAIGQLQG 395
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 27.1 bits (57), Expect = 7.6
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = -3
Query: 269 SFSSLFKISLNP*ADTVLNGFDFREFPELLDKSPHKNTGTVDALATLRTSNGNSKRQNAI 90
S SS +I + + VL+G + R ++ G ++ N S R +AI
Sbjct: 167 SMSSSIRIHEDSRGEIVLHGVEQRSVFDMHGTMDILKNGALNRTVAATNMNEQSSRSHAI 226
Query: 89 FVLH 78
F LH
Sbjct: 227 FTLH 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,607,838
Number of Sequences: 27780
Number of extensions: 204677
Number of successful extensions: 494
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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