Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30275
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    29   0.036
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.6  

>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 29.1 bits (62), Expect = 0.036
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 449 SFASYSRNS-YSRRGVQRQGPIRGLGTRSGCAGRRKNG 559
           S+  YS NS   R  + + G + G G+  GC  R+K G
Sbjct: 140 SYDPYSPNSKIGRDELSQPGSLNGYGSSDGCDARKKKG 177


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 162 IVSGGCFGPTTKRTIVGGWAWAW 230
           IV+G    PT    + GG AW+W
Sbjct: 153 IVNGKRVPPTNWVGVFGGSAWSW 175


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 184 PKQPPETISASLGPTVWMLPILNPFTVTF 98
           P +PP+ +  +L    W+   +NPF   F
Sbjct: 333 PVEPPDILMPALTWLGWINSAINPFIYAF 361


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/83 (20%), Positives = 29/83 (34%)
 Frame = -1

Query: 566  LDSHSSDVRRSHFAYQARELVPVFVHLFYCKSSENSSQMTLQRLQDSHVNLFDGLAQELL 387
            +D+H  DV+ S F +   +++          +     + T   L  +    FDG    L 
Sbjct: 1404 MDAHFKDVKLSDFGFSTEDILDTADEDLLINNVFYEDE-TSCMLDKTRAQTFDGKDYPLR 1462

Query: 386  AGSCEKFVFVHDLALGDSGHRER 318
             G C   V      +    H E+
Sbjct: 1463 LGPCWHAVMTTYPRINPDNHNEK 1485


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 162 IVSGGCFGPTTKRTIVGGWAWAW 230
           IV+G    PT    + GG AW+W
Sbjct: 153 IVNGKRVPPTNWVGVFGGSAWSW 175


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -1

Query: 275 CHHFKGYTLDVRNQTPGPCP 216
           CH   GY  DV  Q    CP
Sbjct: 247 CHCKPGYQADVEKQECTECP 266


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +3

Query: 297 VETAQGVPLTVTGVAQCKIMNEDELLTTACEQFL 398
           +E  +G+  T +  + C  ++ DE+  +   QFL
Sbjct: 310 LEKYEGISSTPSQASSCSCLDCDEIRESLDTQFL 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,376
Number of Sequences: 438
Number of extensions: 4838
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)