Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30274
(680 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57277| Best HMM Match : Phage_T7_Capsid (HMM E-Value=6.7) 101 5e-22
SB_8675| Best HMM Match : Aminotran_1_2 (HMM E-Value=0) 97 1e-20
SB_51759| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_5269| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_24421| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_33928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17) 29 2.6
SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 29 3.5
SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45) 29 3.5
SB_41487| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07) 29 4.6
SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44) 28 6.1
SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0) 28 6.1
SB_2438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_23855| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_36522| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06) 28 8.0
SB_33521| Best HMM Match : Utp14 (HMM E-Value=0.48) 28 8.0
>SB_57277| Best HMM Match : Phage_T7_Capsid (HMM E-Value=6.7)
Length = 130
Score = 101 bits (242), Expect = 5e-22
Identities = 43/64 (67%), Positives = 55/64 (85%)
Frame = +2
Query: 50 GCTGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVR 229
G +R SS WW++V+ GPPD ILG+TEA+K+DT+PKK+NLGVGAYRDD GKP+VLPSV+
Sbjct: 42 GYAAVRLSS-WWSHVEAGPPDAILGVTEAFKRDTNPKKMNLGVGAYRDDTGKPYVLPSVK 100
Query: 230 KAEE 241
KA +
Sbjct: 101 KASD 104
>SB_8675| Best HMM Match : Aminotran_1_2 (HMM E-Value=0)
Length = 512
Score = 97.1 bits (231), Expect = 1e-20
Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Frame = +2
Query: 185 YRDDEGKPFVLPSVRKAEEILHSRG-----LNHEYAPISGEATYTDAVAKLAFGEDSPVI 349
YRD++GKP+VLP V K E L ++G LNHEY I G ++DA KL G D P I
Sbjct: 106 YRDNDGKPWVLPVVSKVETQL-AQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAI 164
Query: 350 KNKSNCTVQTLSGTGALRLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPH-KKYR 526
C +Q++SGTG++ LGL+F+ + Y K ++ PTWGNH + + ++YR
Sbjct: 165 AQNRVCGIQSISGTGSVFLGLKFLYQFY-NCKTAYISKPTWGNHLKTLKAVGFTDIREYR 223
Query: 527 YFDPKTNGFD 556
Y+ +T D
Sbjct: 224 YYKAETCSVD 233
Score = 85.0 bits (201), Expect = 5e-17
Identities = 45/99 (45%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Frame = +2
Query: 68 ASSTWWNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEIL 247
AS+ + +V + P D + + Y KD P K+NLGVGAYRD++GKP+VLP V K E L
Sbjct: 2 ASTNLFKDVPLVPTDHVFHVMACYNKDKDPSKINLGVGAYRDNDGKPWVLPVVSKVETQL 61
Query: 248 HSRG-----LNHEYAPISGEATYTDAVAKLAFGEDSPVI 349
++G LNHEY I G ++DA KL G D P I
Sbjct: 62 -AQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAI 99
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 583 QKFPKVPLFLLHACAHNPTGVDPKPNDWEQLS 678
+K P+ + +LH CAHNPTGVD + W +++
Sbjct: 242 EKAPEGSIIVLHECAHNPTGVDLSHDQWIKIA 273
>SB_51759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 51.6 bits (118), Expect = 6e-07
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Frame = +2
Query: 185 YRDDEGKPFVLPSVRKAEEILHSRG-----LNHEYAPISGEATYTDAVAKLAFGEDSPVI 349
YRD++GKP+VLP V K E L ++G LNHEY I G ++DA KL G D P I
Sbjct: 2 YRDNDGKPWVLPVVSKVETQL-AQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAI 60
>SB_5269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = -2
Query: 535 IEVTVFLVRQVEGVADLRVVSPSRRREPDLLCLSVVFRYELESKAESASAGQCLYSTVAL 356
++ T F V+QV + D + PS R +L LS +S + ++ +C Y ++ +
Sbjct: 225 LKFTQFQVKQVLSIGDRSIAGPSTRTTCNLFELSHRDEMTRKSHLQVETSHECEYDSLEV 284
Query: 355 IFDDRAVFSK 326
DRAV S+
Sbjct: 285 YNGDRAVESQ 294
>SB_24421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 335 DSPVIKN---KSNCTVQTLSGTGALRLGLEFITKHYAKAKEI--WLPTPTWGNHPQICNT 499
D P++++ KSNC+V +G E ++HY K LP+ TW N +C
Sbjct: 3 DCPILQSELIKSNCSVADEYSSGT-HCAFECDSQHYLKGATTIACLPSGTWDNKQPVCIE 61
Query: 500 LNLPHK 517
HK
Sbjct: 62 NATMHK 67
>SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 110 DVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGLNH 268
DV YK+D + NLGV AYR P +LP + +EI++++G+ +
Sbjct: 84 DVACDSYHKYKEDVQLLR-NLGVKAYRFSISWPRILP--KGTKEIINTKGIEY 133
>SB_33928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +2
Query: 338 SPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHK 517
S V ++ + ++T + TG L + +HY +++ P P W Q ++LN+
Sbjct: 177 SLVDESTLSAAIKTATITGTLSWDVRQALRHYVHQQDV--PVPAWPLMDQPLDSLNIASL 234
Query: 518 KYRY 529
+ RY
Sbjct: 235 RIRY 238
>SB_10735| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1013
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +2
Query: 338 SPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHK 517
S V ++ + ++T + TG L + +HY +++ P P W Q ++LN+
Sbjct: 714 SLVDESTLSAAIKTATITGTLSWDVRQALRHYVHQQDV--PVPAWPLMDQPLDSLNIASL 771
Query: 518 KYRY 529
+ RY
Sbjct: 772 RIRY 775
>SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1227
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 419 ITKHYAKAKEIWLPTPTWGNHPQICN 496
+T AK +WL P++GN PQ N
Sbjct: 92 VTHRSAKESRLWLSEPSYGNWPQQLN 117
>SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45)
Length = 671
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 225 TEGKTNGFPSSSLYAPTPRFTFL 157
++ KT GF SSS P PRF F+
Sbjct: 377 SQEKTKGFDSSSWMKPNPRFMFM 399
>SB_41487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/47 (21%), Positives = 25/47 (53%)
Frame = +3
Query: 183 HIEMMRENHLFCLLSERQKKFSIVEDSIMSMLPSVVRPHILML*LNW 323
H++ R H++ L + ++ S+ + S+ LP + P ++ ++W
Sbjct: 112 HLKQGRGKHVYRLFLDAMRRLSMYQRSVRLFLPRAILPMHMLTRIHW 158
>SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07)
Length = 503
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 473 GNHPQICNTLNLPHKKYRYFDPKTNGFDLQGSTRGY 580
G H + CN N PHK + FDPK +GS++GY
Sbjct: 103 GIHQRSCNPDN-PHKPSKNFDPKRVQSG-RGSSQGY 136
>SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44)
Length = 945
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 347 IKNKSNCTVQTLSGTGALRLGLEFITKHYAKAKEIWLPTPTWGNHP 484
+ NK NC V+TLS G ++ L A ++ + L PT G P
Sbjct: 596 LPNKRNCAVETLS--GGMKRKLSVAMAFVAGSRTVILDEPTAGVDP 639
>SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0)
Length = 1498
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = -2
Query: 286 TDGSILMIESSTME---NFFCLSDRRQNKWFSLIISICSNTKIYFFRMCVLL--VCFCNA 122
+D I++ +M+ +F+ L+ R+ +++FSL ++ +++K + R+C + V A
Sbjct: 1127 SDPDIIVFTGYSMQRVVHFYSLAQRKHSRYFSLAQALSNDSKSGYRRVCAFVHQVVRTAA 1186
Query: 121 *DYIWRTHLNIVPPG 77
+ W L+I P G
Sbjct: 1187 LTH-WALSLDISPKG 1200
>SB_2438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = -2
Query: 367 TVALIFDDRAVFSKSQFSYSISICGLTTDGSILMIESSTMENF----FCLSDRRQNKWFS 200
TV L D +F + D S+L++ + ++E F F + R KWF
Sbjct: 219 TVDLYIADEWLFGAFMCKTVTFLQNTVLDASVLILLTISIEKFTVVCFPIQSRFYRKWFR 278
Query: 199 LIISIC 182
I+ +C
Sbjct: 279 YIVGVC 284
>SB_23855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = -2
Query: 367 TVALIFDDRAVFSKSQFSYSISICGLTTDGSILMIESSTMENF----FCLSDRRQNKWFS 200
TV L D +F + D S+L++ + ++E F F + R KWF
Sbjct: 131 TVDLYIADEWLFGAFMCKTVTFLQNTVLDASVLILLTISIEKFTVVCFPIQSRFYRKWFR 190
Query: 199 LIISIC 182
I+ +C
Sbjct: 191 YIVGVC 196
>SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 821
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 381 SVCTVQLLLFLMTGLSSPKASLATASVYVASPLM 280
++CTV +L+ + T L K S+ +YV SPL+
Sbjct: 153 AICTVTILVGVFTPLIPLKISVTLFLIYVFSPLL 186
>SB_36522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 478 PPANLQHPQLAAQEIPLLRSQDQWFRFAGEHS-RIYQKFPKVPL 606
PP + HP + E PLL ++ + RFA S + P VP+
Sbjct: 351 PPIGMSHPIIGLPESPLLNTKVFYPRFAHPSSPTLRHNAPPVPM 394
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +2
Query: 191 DDEGKPFVLPSVRKAEEILHSRGLNHEYAPISGEA 295
D + KP + + +E +H++ + H+YA SGE+
Sbjct: 171 DIDQKPTANSKMDEKKEFIHAKYIKHQYAQKSGES 205
>SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06)
Length = 863
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 378 VCTVQLLLFLMTGLSSPKASLATASVYVASPLM 280
+CTV + L T L K SL S+Y+ PL+
Sbjct: 680 ICTVTMSLGFFTPLIPGKISLTLFSIYILLPLL 712
>SB_33521| Best HMM Match : Utp14 (HMM E-Value=0.48)
Length = 947
Score = 27.9 bits (59), Expect = 8.0
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +2
Query: 86 NNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRG-- 259
NN Q ++G+TE++KK + KK N G A V K +++ S
Sbjct: 758 NNHQSDDIIKVVGVTESHKKKENKKKDNDGADA-------------VNKVIKVIESDDGH 804
Query: 260 LNHEYAPISGEATYTDAVAKLAFGEDSPVI----KNKSNCTVQTLSGTGALRLG 409
+N E PI+ + + + KL D + ++S V + SG+G+ G
Sbjct: 805 VNEEEGPITNHSDDVNEIIKLVESRDGHMTITDESSESGLLVDSGSGSGSKESG 858
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,584,171
Number of Sequences: 59808
Number of extensions: 596469
Number of successful extensions: 1575
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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