Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30273
         (458 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z139 Cluster: Putative uncharacterized protein; n=5; ...    34   1.7  
UniRef50_Q4DSH5 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_P34315 Cluster: Putative sodium/calcium exchanger 6 pre...    31   9.0  

>UniRef50_Q4Z139 Cluster: Putative uncharacterized protein; n=5;
            Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein - Plasmodium berghei
          Length = 1681

 Score = 33.9 bits (74), Expect = 1.7
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +2

Query: 317  SYVQRLCFIFPHLCAFTDIKQLINNGYYTFEPEETLNRQNKTNTQLH 457
            +Y+ ++CF FP    +T +  L+ N Y       T N   KTN QLH
Sbjct: 1350 NYLNKICFGFPKFVQYT-LFYLLKNKYIKLYKYNTPNVLEKTNEQLH 1395


>UniRef50_Q4DSH5 Cluster: Putative uncharacterized protein; n=1;
            Trypanosoma cruzi|Rep: Putative uncharacterized protein -
            Trypanosoma cruzi
          Length = 4423

 Score = 33.1 bits (72), Expect = 3.0
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 305  RIPRSYVQRLCFIFPHLCAFTDIKQLINNGYYTFEPEETLNRQNKT 442
            RI   Y+Q LC      C    I+Q+++ GY+    E   N+Q  T
Sbjct: 2950 RIGSEYLQTLCAHLSRQCVLAAIRQVVSPGYHVLAIERCDNKQRDT 2995


>UniRef50_P34315 Cluster: Putative sodium/calcium exchanger 6
           precursor (Na(+)/Ca(2+)-exchange protein 6); n=2;
           Caenorhabditis|Rep: Putative sodium/calcium exchanger 6
           precursor (Na(+)/Ca(2+)-exchange protein 6) -
           Caenorhabditis elegans
          Length = 590

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -3

Query: 282 LSK*PPFYLDYISYPSY--HLISFYLISSQLINV 187
           L K PPFY   ISY  +   +   YLISS+++NV
Sbjct: 420 LHKEPPFYKSLISYAGFLMSIAWIYLISSEVVNV 453


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 354,593,755
Number of Sequences: 1657284
Number of extensions: 5488982
Number of successful extensions: 10744
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10740
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)