Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30272
         (692 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6LAB5 Cluster: Putative uncharacterized protein; n=2; ...    35   1.6  
UniRef50_UPI00003C0028 Cluster: PREDICTED: similar to CG33691-PB...    34   2.9  
UniRef50_UPI00015B5649 Cluster: PREDICTED: similar to conserved ...    33   5.0  

>UniRef50_A6LAB5 Cluster: Putative uncharacterized protein; n=2;
           Parabacteroides|Rep: Putative uncharacterized protein -
           Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
           / NCTC11152)
          Length = 214

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 16/38 (42%), Positives = 26/38 (68%)
 Frame = -1

Query: 308 EYYFIVKNLLLVL*FKIKSVCFRTLYGVWLPVVLMSGI 195
           EYY++  + LL+  FK+K+  + T YGV  P+V+MS +
Sbjct: 126 EYYYLKASELLLFFFKLKAGEYGTFYGVVDPMVIMSAL 163


>UniRef50_UPI00003C0028 Cluster: PREDICTED: similar to CG33691-PB,
           isoform B; n=2; Apis mellifera|Rep: PREDICTED: similar
           to CG33691-PB, isoform B - Apis mellifera
          Length = 774

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +2

Query: 638 VQKALVENTMVPCINSKP 691
           +QKALVE+ MVPCIN KP
Sbjct: 649 IQKALVEDKMVPCINFKP 666


>UniRef50_UPI00015B5649 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 786

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +2

Query: 638 VQKALVENTMVPCINSKP 691
           VQKALVE+ +VPCIN KP
Sbjct: 659 VQKALVEDKLVPCINFKP 676


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,357,719
Number of Sequences: 1657284
Number of extensions: 9150080
Number of successful extensions: 18724
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18721
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)